RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 DSPP15924 2871 aaKnown RBP4.32□□□□□ -1.72
CMTM4-205ENST00000581487 AKAP13Q12802 2813 aa4.32□□□□□ -1.72
CMTM4-205ENST00000581487 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
CMTM4-205ENST00000581487 UNC79Q9P2D8 2635 aa4.32□□□□□ -1.72
CMTM4-205ENST00000581487 MUC3AQ02505 3323 aa4.31□□□□□ -1.72
CMTM4-205ENST00000581487 KALRNO60229 2985 aa4.3□□□□□ -1.72
CMTM4-205ENST00000581487 A0A087X002 238 aa4.3□□□□□ -1.72
CMTM4-205ENST00000581487 TEX15Q9BXT5 2789 aa4.29□□□□□ -1.72
CMTM4-205ENST00000581487 DMXL1Q9Y485 3027 aa4.29□□□□□ -1.72
CMTM4-205ENST00000581487 IGSF10Q6WRI0 2623 aa4.29□□□□□ -1.72
CMTM4-205ENST00000581487 KRTAP11-1Q8IUC1 163 aa4.28□□□□□ -1.72
CMTM4-205ENST00000581487 BAHCC1Q9P281 2608 aa4.28□□□□□ -1.72
CMTM4-205ENST00000581487 AKAP9Q99996 3911 aa4.27□□□□□ -1.73
CMTM4-205ENST00000581487 NOTCH2NLQ7Z3S9 236 aa4.27□□□□□ -1.73
CMTM4-205ENST00000581487 GCN1Q92616 2671 aaKnown RBP4.27□□□□□ -1.73
CMTM4-205ENST00000581487 ATMQ13315 3056 aa4.27□□□□□ -1.73
CMTM4-205ENST00000581487 FLG2Q5D862 2391 aaPredicted RBP4.26□□□□□ -1.73
CMTM4-205ENST00000581487 CRYBG3Q68DQ2 2970 aa4.24□□□□□ -1.73
CMTM4-205ENST00000581487 DMXL2Q8TDJ6 3036 aa4.24□□□□□ -1.73
CMTM4-205ENST00000581487 ADGRG4Q8IZF6 3080 aa4.23□□□□□ -1.73
CMTM4-205ENST00000581487 CHD6Q8TD26 2715 aa4.23□□□□□ -1.73
CMTM4-205ENST00000581487 NOTCH1P46531 2555 aa4.21□□□□□ -1.74
CMTM4-205ENST00000581487 NBEAL2Q6ZNJ1 2754 aa4.21□□□□□ -1.74
CMTM4-205ENST00000581487 KRTAP10-2P60368 255 aa4.2□□□□□ -1.74
CMTM4-205ENST00000581487 KRTAP13-1Q8IUC0 172 aa4.2□□□□□ -1.74
CMTM4-205ENST00000581487 KRTAP10-1P60331 282 aa4.2□□□□□ -1.74
CMTM4-205ENST00000581487 A0A1B0GVY2 172 aa4.19□□□□□ -1.74
CMTM4-205ENST00000581487 Q6ZRN7 208 aaPredicted RBP4.19□□□□□ -1.74
CMTM4-205ENST00000581487 TACC2O95359 2948 aa4.18□□□□□ -1.74
CMTM4-205ENST00000581487 VPS13CQ709C8 3753 aa4.18□□□□□ -1.74
CMTM4-205ENST00000581487 ASH1LQ9NR48 2969 aaKnown RBP4.18□□□□□ -1.74
CMTM4-205ENST00000581487 COL6A5A8TX70 2615 aa4.17□□□□□ -1.74
CMTM4-205ENST00000581487 LRBAP50851 2863 aa4.15□□□□□ -1.74
CMTM4-205ENST00000581487 COL12A1Q99715 3063 aa4.15□□□□□ -1.74
CMTM4-205ENST00000581487 KRTAP10-10P60014 251 aa4.15□□□□□ -1.75
CMTM4-205ENST00000581487 UBR5O95071 2799 aaPredicted RBP4.15□□□□□ -1.75
CMTM4-205ENST00000581487 NBPF19A0A087WUL8 3843 aa4.14□□□□□ -1.75
CMTM4-205ENST00000581487 CELSR1Q9NYQ6 3014 aa4.12□□□□□ -1.75
CMTM4-205ENST00000581487 FLNCQ14315 2725 aa4.12□□□□□ -1.75
CMTM4-205ENST00000581487 KRTAP13-2Q52LG2 175 aa4.11□□□□□ -1.75
CMTM4-205ENST00000581487 ZZEF1O43149 2961 aa4.11□□□□□ -1.75
CMTM4-205ENST00000581487 ITPR1Q14643 2758 aa4.1□□□□□ -1.75
CMTM4-205ENST00000581487 KRTAP21-3Q3LHN1 58 aa4.09□□□□□ -1.75
CMTM4-205ENST00000581487 NBEAL1Q6ZS30 2694 aa4.09□□□□□ -1.75
CMTM4-205ENST00000581487 H0YAA0 97 aa4.09□□□□□ -1.76
CMTM4-205ENST00000581487 DMBT1Q9UGM3 2413 aaPredicted RBP4.08□□□□□ -1.76
CMTM4-205ENST00000581487 NSD1Q96L73 2696 aaPredicted RBP4.06□□□□□ -1.76
CMTM4-205ENST00000581487 CSMD3Q7Z407 3707 aa4.06□□□□□ -1.76
CMTM4-205ENST00000581487 ITPR2Q14571 2701 aa4.05□□□□□ -1.76
CMTM4-205ENST00000581487 RPS29P62273 56 aaKnown RBP4.05□□□□□ -1.76
CMTM4-205ENST00000581487 STAB2Q8WWQ8 2551 aa4.02□□□□□ -1.77
CMTM4-205ENST00000581487 UTP20O75691 2785 aaKnown RBP3.99□□□□□ -1.77
CMTM4-205ENST00000581487 HIVEP1P15822 2718 aa3.99□□□□□ -1.77
CMTM4-205ENST00000581487 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
CMTM4-205ENST00000581487 NIPBLQ6KC79 2804 aaeCLIP3.98□□□□□ -1.77
CMTM4-205ENST00000581487 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
CMTM4-205ENST00000581487 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
CMTM4-205ENST00000581487 APCP25054 2843 aa3.94□□□□□ -1.78
CMTM4-205ENST00000581487 KRTAP1-4P0C5Y4 121 aa3.94□□□□□ -1.78
CMTM4-205ENST00000581487 HRNRQ86YZ3 2850 aaPredicted RBP3.94□□□□□ -1.78
CMTM4-205ENST00000581487 ZANQ9Y493 2812 aa3.92□□□□□ -1.78
CMTM4-205ENST00000581487 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
CMTM4-205ENST00000581487 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
CMTM4-205ENST00000581487 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
CMTM4-205ENST00000581487 CELSR2Q9HCU4 2923 aa3.88□□□□□ -1.79
CMTM4-205ENST00000581487 TENM4Q6N022 2769 aa3.87□□□□□ -1.79
CMTM4-205ENST00000581487 LYSTQ99698 3801 aa3.86□□□□□ -1.79
CMTM4-205ENST00000581487 KMT2BQ9UMN6 2715 aaPredicted RBP3.86□□□□□ -1.79
CMTM4-205ENST00000581487 TPRXLQ17RH7 258 aa3.84□□□□□ -1.79
CMTM4-205ENST00000581487 DCHS2Q6V1P9 2916 aa3.84□□□□□ -1.8
CMTM4-205ENST00000581487 FBN2P35556 2912 aa3.81□□□□□ -1.8
CMTM4-205ENST00000581487 BSNQ9UPA5 3926 aa3.81□□□□□ -1.8
CMTM4-205ENST00000581487 XP32Q5T750 250 aa3.79□□□□□ -1.8
CMTM4-205ENST00000581487 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
CMTM4-205ENST00000581487 TRRAPQ9Y4A5 3859 aa3.76□□□□□ -1.81
CMTM4-205ENST00000581487 NF1P21359 2839 aa3.75□□□□□ -1.81
CMTM4-205ENST00000581487 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
CMTM4-205ENST00000581487 KRTAP3-2Q9BYR7 98 aa3.75□□□□□ -1.81
CMTM4-205ENST00000581487 TENM3Q9P273 2699 aa3.75□□□□□ -1.81
CMTM4-205ENST00000581487 INE1O15225 51 aa3.74□□□□□ -1.81
CMTM4-205ENST00000581487 MXRA5Q9NR99 2828 aa3.73□□□□□ -1.81
CMTM4-205ENST00000581487 TENM2Q9NT68 2774 aa3.71□□□□□ -1.82
CMTM4-205ENST00000581487 ZNF469Q96JG9 3925 aaPredicted RBP3.71□□□□□ -1.82
CMTM4-205ENST00000581487 PKD1L1Q8TDX9 2849 aa3.69□□□□□ -1.82
CMTM4-205ENST00000581487 TENM1Q9UKZ4 2725 aa3.69□□□□□ -1.82
CMTM4-205ENST00000581487 ALMS1Q8TCU4 4167 aa3.67□□□□□ -1.82
CMTM4-205ENST00000581487 KRTAP3-1Q9BYR8 98 aa3.67□□□□□ -1.82
CMTM4-205ENST00000581487 PDZD2O15018 2839 aa3.66□□□□□ -1.82
CMTM4-205ENST00000581487 KRTAP12-1P59990 96 aa3.65□□□□□ -1.83
CMTM4-205ENST00000581487 VWFP04275 2813 aa3.65□□□□□ -1.83
CMTM4-205ENST00000581487 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
CMTM4-205ENST00000581487 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
CMTM4-205ENST00000581487 ANK2Q01484 3957 aa3.62□□□□□ -1.83
CMTM4-205ENST00000581487 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
CMTM4-205ENST00000581487 TGP01266 2768 aa3.62□□□□□ -1.83
CMTM4-205ENST00000581487 OTOGQ6ZRI0 2925 aa3.58□□□□□ -1.84
CMTM4-205ENST00000581487 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
CMTM4-205ENST00000581487 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
CMTM4-205ENST00000581487 FBN1P35555 2871 aaKnown RBP3.52□□□□□ -1.85
CMTM4-205ENST00000581487 CMYA5Q8N3K9 4069 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms