RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 HRCT1Q6UXD1 115 aa5.91□□□□□ -1.46
CCDC47-203ENST00000580986 HERC1Q15751 4861 aa5.91□□□□□ -1.46
CCDC47-203ENST00000580986 C14orf132Q9NPU4 83 aa5.9□□□□□ -1.46
CCDC47-203ENST00000580986 A0A1B0GV72 72 aa5.89□□□□□ -1.47
CCDC47-203ENST00000580986 A0A1B0GV90 55 aa5.89□□□□□ -1.47
CCDC47-203ENST00000580986 A0A087WSZ3 146 aa5.88□□□□□ -1.47
CCDC47-203ENST00000580986 C1orf195Q5TG92 126 aa5.86□□□□□ -1.47
CCDC47-203ENST00000580986 ETDBQ3ZM63 59 aa5.85□□□□□ -1.47
CCDC47-203ENST00000580986 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
CCDC47-203ENST00000580986 RETNLBQ9BQ08 111 aa5.84□□□□□ -1.47
CCDC47-203ENST00000580986 VPS25Q9BRG1 176 aa5.84□□□□□ -1.47
CCDC47-203ENST00000580986 PRR4Q16378 134 aa5.83□□□□□ -1.48
CCDC47-203ENST00000580986 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
CCDC47-203ENST00000580986 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
CCDC47-203ENST00000580986 Q96NJ1 140 aa5.82□□□□□ -1.48
CCDC47-203ENST00000580986 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
CCDC47-203ENST00000580986 HMCN2Q8NDA2 5059 aa5.8□□□□□ -1.48
CCDC47-203ENST00000580986 J3KT08 172 aa5.79□□□□□ -1.48
CCDC47-203ENST00000580986 FAM240AA0A1B0GVK7 77 aa5.78□□□□□ -1.48
CCDC47-203ENST00000580986 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
CCDC47-203ENST00000580986 ACYP1P07311 99 aa5.77□□□□□ -1.49
CCDC47-203ENST00000580986 NREPQ16612 68 aa5.77□□□□□ -1.49
CCDC47-203ENST00000580986 IGKV4-1P06312 121 aa5.75□□□□□ -1.49
CCDC47-203ENST00000580986 Q6ZVQ6 151 aa5.74□□□□□ -1.49
CCDC47-203ENST00000580986 UBL5Q9BZL1 73 aa5.74□□□□□ -1.49
CCDC47-203ENST00000580986 LINC00846Q9NV44 126 aa5.74□□□□□ -1.49
CCDC47-203ENST00000580986 SIGMAR1Q99720 223 aa5.73□□□□□ -1.49
CCDC47-203ENST00000580986 LPAP08519 4548 aa5.71□□□□□ -1.5
CCDC47-203ENST00000580986 A8MWP4 228 aa5.71□□□□□ -1.5
CCDC47-203ENST00000580986 J3QR89 54 aa5.71□□□□□ -1.5
CCDC47-203ENST00000580986 CDIP1Q9H305 208 aa5.71□□□□□ -1.5
CCDC47-203ENST00000580986 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
CCDC47-203ENST00000580986 C8orf87E5RJ46 101 aa5.7□□□□□ -1.5
CCDC47-203ENST00000580986 NDUFB1O75438 58 aa5.7□□□□□ -1.5
CCDC47-203ENST00000580986 LRP2P98164 4655 aa5.69□□□□□ -1.5
CCDC47-203ENST00000580986 BPY2O14599 106 aa5.69□□□□□ -1.5
CCDC47-203ENST00000580986 DEFB116Q30KQ4 102 aa5.69□□□□□ -1.5
CCDC47-203ENST00000580986 DSCR10P59022 87 aa5.67□□□□□ -1.5
CCDC47-203ENST00000580986 LINC00313P59037 77 aa5.67□□□□□ -1.5
CCDC47-203ENST00000580986 CXCL6P80162 114 aa5.67□□□□□ -1.5
CCDC47-203ENST00000580986 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
CCDC47-203ENST00000580986 IGKV3D-7A0A0C4DH55 119 aa5.66□□□□□ -1.5
CCDC47-203ENST00000580986 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
CCDC47-203ENST00000580986 ATP5EP2Q5VTU8 51 aa5.65□□□□□ -1.5
CCDC47-203ENST00000580986 IGHV6-1A0A0B4J1U7 121 aa5.64□□□□□ -1.51
CCDC47-203ENST00000580986 Q75L30 129 aa5.64□□□□□ -1.51
CCDC47-203ENST00000580986 C20orf166-AS1Q96NR2 134 aa5.64□□□□□ -1.51
CCDC47-203ENST00000580986 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
CCDC47-203ENST00000580986 K7EQZ3 153 aa5.63□□□□□ -1.51
CCDC47-203ENST00000580986 K7ERU9 68 aa5.63□□□□□ -1.51
CCDC47-203ENST00000580986 A8MUU9 505 aa5.62□□□□□ -1.51
CCDC47-203ENST00000580986 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
CCDC47-203ENST00000580986 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
CCDC47-203ENST00000580986 C8orf17Q9NRJ1 99 aa5.62□□□□□ -1.51
CCDC47-203ENST00000580986 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
CCDC47-203ENST00000580986 NOTCH2NLQ7Z3S9 236 aa5.61□□□□□ -1.51
CCDC47-203ENST00000580986 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
CCDC47-203ENST00000580986 Q8N9P0 234 aaPredicted RBP5.59□□□□□ -1.51
CCDC47-203ENST00000580986 TMEM254Q8TBM7 123 aa5.59□□□□□ -1.51
CCDC47-203ENST00000580986 hDV103S1A0JD37 113 aa5.57□□□□□ -1.52
CCDC47-203ENST00000580986 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
CCDC47-203ENST00000580986 Q8N9L7 120 aa5.56□□□□□ -1.52
CCDC47-203ENST00000580986 MRPL34Q9BQ48 92 aaKnown RBP5.56□□□□□ -1.52
CCDC47-203ENST00000580986 HCG22E2RYF7 251 aa5.55□□□□□ -1.52
CCDC47-203ENST00000580986 CASC2Q6XLA1 102 aa5.54□□□□□ -1.52
CCDC47-203ENST00000580986 ATP11AUNQ6ZP68 121 aa5.54□□□□□ -1.52
CCDC47-203ENST00000580986 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
CCDC47-203ENST00000580986 PCOTHQ58A44 107 aa5.52□□□□□ -1.53
CCDC47-203ENST00000580986 IMUPQ9GZP8 106 aa5.5□□□□□ -1.53
CCDC47-203ENST00000580986 HIST1H4AP62805 103 aaKnown RBP5.49□□□□□ -1.53
CCDC47-203ENST00000580986 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
CCDC47-203ENST00000580986 ZCCHC13Q8WW36 166 aaKnown RBP5.48□□□□□ -1.53
CCDC47-203ENST00000580986 TP53AIP1Q9HCN2 124 aa5.47□□□□□ -1.53
CCDC47-203ENST00000580986 NDUFS5O43920 106 aa5.45□□□□□ -1.54
CCDC47-203ENST00000580986 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
CCDC47-203ENST00000580986 MUC2Q02817 5179 aa5.43□□□□□ -1.54
CCDC47-203ENST00000580986 A0A087WVE0 104 aa5.43□□□□□ -1.54
CCDC47-203ENST00000580986 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
CCDC47-203ENST00000580986 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
CCDC47-203ENST00000580986 A0A0U1RQV1 116 aa5.39□□□□□ -1.55
CCDC47-203ENST00000580986 UQCRQO14949 82 aa5.38□□□□□ -1.55
CCDC47-203ENST00000580986 Q5W150 140 aa5.38□□□□□ -1.55
CCDC47-203ENST00000580986 TRAV22A0A0B4J277 110 aa5.36□□□□□ -1.55
CCDC47-203ENST00000580986 SPINK7P58062 85 aa5.36□□□□□ -1.55
CCDC47-203ENST00000580986 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
CCDC47-203ENST00000580986 C7orf65Q6ZTY9 151 aa5.35□□□□□ -1.55
CCDC47-203ENST00000580986 ATOX1O00244 68 aa5.34□□□□□ -1.55
CCDC47-203ENST00000580986 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
CCDC47-203ENST00000580986 SCGB1A1P11684 91 aa5.33□□□□□ -1.56
CCDC47-203ENST00000580986 HRES1P13985 223 aa5.33□□□□□ -1.56
CCDC47-203ENST00000580986 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
CCDC47-203ENST00000580986 SMIM20Q8N5G0 67 aa5.33□□□□□ -1.56
CCDC47-203ENST00000580986 FAM236AA0A1B0GUQ0 79 aa5.32□□□□□ -1.56
CCDC47-203ENST00000580986 FAM236BA0A1B0GV22 79 aa5.32□□□□□ -1.56
CCDC47-203ENST00000580986 IGKV2-30P06310 120 aa5.32□□□□□ -1.56
CCDC47-203ENST00000580986 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
CCDC47-203ENST00000580986 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
CCDC47-203ENST00000580986 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
CCDC47-203ENST00000580986 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
CCDC47-203ENST00000580986 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms