RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PSMB2P49721 201 aa8.77□□□□□ -1.01
MKS1-209ENST00000580127 PAM16Q9Y3D7 125 aa8.77□□□□□ -1.01
MKS1-209ENST00000580127 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
MKS1-209ENST00000580127 VAMP8Q9BV40 100 aa8.75□□□□□ -1.01
MKS1-209ENST00000580127 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
MKS1-209ENST00000580127 SPINK7P58062 85 aa8.73□□□□□ -1.01
MKS1-209ENST00000580127 C2orf91Q6ZV80 131 aa8.73□□□□□ -1.01
MKS1-209ENST00000580127 J3KT08 172 aa8.72□□□□□ -1.01
MKS1-209ENST00000580127 UBE2V1Q13404 147 aa8.72□□□□□ -1.01
MKS1-209ENST00000580127 A8MWP4 228 aa8.71□□□□□ -1.02
MKS1-209ENST00000580127 VPS25Q9BRG1 176 aa8.71□□□□□ -1.02
MKS1-209ENST00000580127 SVIPQ8NHG7 77 aa8.7□□□□□ -1.02
MKS1-209ENST00000580127 NDUFB1O75438 58 aa8.69□□□□□ -1.02
MKS1-209ENST00000580127 LYRM7Q5U5X0 104 aa8.69□□□□□ -1.02
MKS1-209ENST00000580127 DSCR8Q96T75 97 aa8.69□□□□□ -1.02
MKS1-209ENST00000580127 FXYD2P54710 66 aa8.68□□□□□ -1.02
MKS1-209ENST00000580127 RBM3P98179 157 aaKnown RBP8.68□□□□□ -1.02
MKS1-209ENST00000580127 KRTAP19-6Q3LI70 58 aa8.67□□□□□ -1.02
MKS1-209ENST00000580127 MACF1Q9UPN3 7388 aaKnown RBP8.64□□□□□ -1.03
MKS1-209ENST00000580127 C9JAW5 83 aa8.61□□□□□ -1.03
MKS1-209ENST00000580127 HSD52Q0P140 79 aa8.61□□□□□ -1.03
MKS1-209ENST00000580127 Q8N9P0 234 aaPredicted RBP8.61□□□□□ -1.03
MKS1-209ENST00000580127 SYNE2Q8WXH0 6885 aaKnown RBP8.6□□□□□ -1.03
MKS1-209ENST00000580127 SCGB1C2P0DMR2 95 aa8.6□□□□□ -1.03
MKS1-209ENST00000580127 WFDC13Q8IUB5 93 aa8.6□□□□□ -1.03
MKS1-209ENST00000580127 K7ERJ3 54 aa8.57□□□□□ -1.04
MKS1-209ENST00000580127 Q6ZQT0 140 aa8.57□□□□□ -1.04
MKS1-209ENST00000580127 BAALC-AS2P0C853 105 aa8.54□□□□□ -1.04
MKS1-209ENST00000580127 C8orf17Q9NRJ1 99 aa8.53□□□□□ -1.04
MKS1-209ENST00000580127 A0A1B0GW54 56 aa8.52□□□□□ -1.05
MKS1-209ENST00000580127 IGKV3D-7A0A0C4DH55 119 aa8.51□□□□□ -1.05
MKS1-209ENST00000580127 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
MKS1-209ENST00000580127 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
MKS1-209ENST00000580127 Q6ZVQ6 151 aa8.49□□□□□ -1.05
MKS1-209ENST00000580127 JMJD7-PLA2G4BH0Y9G9 81 aa8.47□□□□□ -1.05
MKS1-209ENST00000580127 PDE6GP18545 87 aa8.46□□□□□ -1.06
MKS1-209ENST00000580127 UQCR10Q9UDW1 63 aa8.43□□□□□ -1.06
MKS1-209ENST00000580127 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
MKS1-209ENST00000580127 LOC110117498A0A087WWA1 95 aa8.4□□□□□ -1.06
MKS1-209ENST00000580127 ATXN8Q156A1 80 aa8.39□□□□□ -1.07
MKS1-209ENST00000580127 NREPQ16612 68 aa8.39□□□□□ -1.07
MKS1-209ENST00000580127 TMEM254Q8TBM7 123 aa8.39□□□□□ -1.07
MKS1-209ENST00000580127 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
MKS1-209ENST00000580127 NDUFS5O43920 106 aa8.37□□□□□ -1.07
MKS1-209ENST00000580127 PYY3Q5JQD4 70 aa8.36□□□□□ -1.07
MKS1-209ENST00000580127 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
MKS1-209ENST00000580127 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
MKS1-209ENST00000580127 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
MKS1-209ENST00000580127 IGKV2D-30A0A075B6S6 120 aa8.31□□□□□ -1.08
MKS1-209ENST00000580127 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
MKS1-209ENST00000580127 MMP24-AS1A0A0U1RRL7 71 aa8.3□□□□□ -1.08
MKS1-209ENST00000580127 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
MKS1-209ENST00000580127 C7orf65Q6ZTY9 151 aa8.29□□□□□ -1.08
MKS1-209ENST00000580127 M0R143 59 aa8.24□□□□□ -1.09
MKS1-209ENST00000580127 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
MKS1-209ENST00000580127 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
MKS1-209ENST00000580127 A6NN06 94 aa8.23□□□□□ -1.09
MKS1-209ENST00000580127 K7EQZ3 153 aa8.22□□□□□ -1.09
MKS1-209ENST00000580127 BPY2O14599 106 aa8.19□□□□□ -1.1
MKS1-209ENST00000580127 C4orf26Q17RF5 130 aa8.18□□□□□ -1.1
MKS1-209ENST00000580127 Q5W150 140 aa8.18□□□□□ -1.1
MKS1-209ENST00000580127 NAA38Q9BRA0 125 aaKnown RBP8.18□□□□□ -1.1
MKS1-209ENST00000580127 C5orf47Q569G3 176 aa8.16□□□□□ -1.1
MKS1-209ENST00000580127 Q5VV11 94 aa8.16□□□□□ -1.1
MKS1-209ENST00000580127 CASC2Q6XLA1 102 aa8.14□□□□□ -1.11
MKS1-209ENST00000580127 CXCL6P80162 114 aa8.13□□□□□ -1.11
MKS1-209ENST00000580127 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
MKS1-209ENST00000580127 HCG22E2RYF7 251 aa8.12□□□□□ -1.11
MKS1-209ENST00000580127 NEBP20929 6669 aa8.11□□□□□ -1.11
MKS1-209ENST00000580127 S4R3F8 94 aa8.09□□□□□ -1.11
MKS1-209ENST00000580127 TSTD3H0UI37 97 aa8.06□□□□□ -1.12
MKS1-209ENST00000580127 H3BT86 120 aa8.05□□□□□ -1.12
MKS1-209ENST00000580127 MT1BP07438 61 aa8.05□□□□□ -1.12
MKS1-209ENST00000580127 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
MKS1-209ENST00000580127 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
MKS1-209ENST00000580127 KRTAP20-1Q3LI63 56 aa8.04□□□□□ -1.12
MKS1-209ENST00000580127 C1orf64Q8NEQ6 169 aa8.02□□□□□ -1.13
MKS1-209ENST00000580127 Q8N9L7 120 aa8.01□□□□□ -1.13
MKS1-209ENST00000580127 KRTAP10-5P60370 271 aa8□□□□□ -1.13
MKS1-209ENST00000580127 LCA10Q71F78 164 aa7.97□□□□□ -1.13
MKS1-209ENST00000580127 KLKP1Q107X0 134 aa7.96□□□□□ -1.14
MKS1-209ENST00000580127 KRTAP3-1Q9BYR8 98 aa7.96□□□□□ -1.14
MKS1-209ENST00000580127 IMUPQ9GZP8 106 aa7.96□□□□□ -1.14
MKS1-209ENST00000580127 BATFQ16520 125 aa7.95□□□□□ -1.14
MKS1-209ENST00000580127 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
MKS1-209ENST00000580127 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
MKS1-209ENST00000580127 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
MKS1-209ENST00000580127 UBL5Q9BZL1 73 aa7.92□□□□□ -1.14
MKS1-209ENST00000580127 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
MKS1-209ENST00000580127 C9orf118A6NHY6 69 aa7.91□□□□□ -1.14
MKS1-209ENST00000580127 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.14
MKS1-209ENST00000580127 A0A1W2PPM0 123 aa7.88□□□□□ -1.15
MKS1-209ENST00000580127 SMIM6P0DI80 62 aa7.83□□□□□ -1.16
MKS1-209ENST00000580127 TAX1BP3O14907 124 aa7.79□□□□□ -1.16
MKS1-209ENST00000580127 KRTAP2-3P0C7H8 128 aa7.78□□□□□ -1.16
MKS1-209ENST00000580127 KRTAP2-4Q9BYR9 128 aa7.78□□□□□ -1.16
MKS1-209ENST00000580127 SPCS1Q9Y6A9 102 aa7.76□□□□□ -1.17
MKS1-209ENST00000580127 KMT2DO14686 5537 aa7.76□□□□□ -1.17
MKS1-209ENST00000580127 CYP4F30PQ9H0H9 118 aa7.73□□□□□ -1.17
MKS1-209ENST00000580127 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms