RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 ANK3Q12955 4377 aaKnown RBP3.22□□□□□ -1.89
CDH8-206ENST00000580044 TENM3Q9P273 2699 aa3.22□□□□□ -1.89
CDH8-206ENST00000580044 NBDYA0A0U1RRE5 68 aa3.21□□□□□ -1.9
CDH8-206ENST00000580044 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
CDH8-206ENST00000580044 CHTF8P0CG12 524 aa3.21□□□□□ -1.9
CDH8-206ENST00000580044 SPACA4Q8TDM5 124 aa3.21□□□□□ -1.9
CDH8-206ENST00000580044 PRR15LQ9BU68 103 aa3.21□□□□□ -1.9
CDH8-206ENST00000580044 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
CDH8-206ENST00000580044 ATP11AUNQ6ZP68 121 aa3.2□□□□□ -1.9
CDH8-206ENST00000580044 Q96NJ1 140 aa3.2□□□□□ -1.9
CDH8-206ENST00000580044 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CDH8-206ENST00000580044 PKD1L1Q8TDX9 2849 aa3.2□□□□□ -1.9
CDH8-206ENST00000580044 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
CDH8-206ENST00000580044 A6NED7 52 aa3.19□□□□□ -1.9
CDH8-206ENST00000580044 SEC61GP60059 68 aa3.19□□□□□ -1.9
CDH8-206ENST00000580044 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
CDH8-206ENST00000580044 MRPL34Q9BQ48 92 aaKnown RBP3.19□□□□□ -1.9
CDH8-206ENST00000580044 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
CDH8-206ENST00000580044 MAST4O15021 2626 aa3.19□□□□□ -1.9
CDH8-206ENST00000580044 NDUFS5O43920 106 aa3.18□□□□□ -1.9
CDH8-206ENST00000580044 CD164Q04900 197 aa3.18□□□□□ -1.9
CDH8-206ENST00000580044 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
CDH8-206ENST00000580044 BAHCC1Q9P281 2608 aa3.18□□□□□ -1.9
CDH8-206ENST00000580044 IGHV6-1A0A0B4J1U7 121 aa3.17□□□□□ -1.9
CDH8-206ENST00000580044 C8orf87E5RJ46 101 aa3.17□□□□□ -1.9
CDH8-206ENST00000580044 PRB2P02812 416 aaPredicted RBP3.17□□□□□ -1.9
CDH8-206ENST00000580044 Q6ZRN7 208 aaPredicted RBP3.17□□□□□ -1.9
CDH8-206ENST00000580044 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
CDH8-206ENST00000580044 HECTD1Q9ULT8 2610 aa3.17□□□□□ -1.9
CDH8-206ENST00000580044 IGLV5-52A0A0A0MRZ9 124 aa3.16□□□□□ -1.9
CDH8-206ENST00000580044 ZNF861PO60384 105 aa3.16□□□□□ -1.9
CDH8-206ENST00000580044 PCOTHQ58A44 107 aa3.16□□□□□ -1.9
CDH8-206ENST00000580044 PLAC8Q9NZF1 115 aa3.16□□□□□ -1.9
CDH8-206ENST00000580044 FLNBO75369 2602 aaKnown RBP3.16□□□□□ -1.9
CDH8-206ENST00000580044 A0A087WTM6 91 aa3.14□□□□□ -1.91
CDH8-206ENST00000580044 RTL8CO15255 209 aa3.14□□□□□ -1.91
CDH8-206ENST00000580044 HRES1P13985 223 aa3.14□□□□□ -1.91
CDH8-206ENST00000580044 ACYP2P14621 99 aa3.14□□□□□ -1.91
CDH8-206ENST00000580044 PSORS1C2Q9UIG4 136 aa3.14□□□□□ -1.91
CDH8-206ENST00000580044 TENM2Q9NT68 2774 aa3.13□□□□□ -1.91
CDH8-206ENST00000580044 PANO1I0J062 215 aa3.13□□□□□ -1.91
CDH8-206ENST00000580044 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
CDH8-206ENST00000580044 SPAG11AQ6PDA7 123 aa3.13□□□□□ -1.91
CDH8-206ENST00000580044 SSBP3-AS1Q7Z2R9 100 aa3.13□□□□□ -1.91
CDH8-206ENST00000580044 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
CDH8-206ENST00000580044 A6NN06 94 aa3.12□□□□□ -1.91
CDH8-206ENST00000580044 LCA10Q71F78 164 aa3.12□□□□□ -1.91
CDH8-206ENST00000580044 IGLV7-43P04211 117 aa3.11□□□□□ -1.91
CDH8-206ENST00000580044 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
CDH8-206ENST00000580044 STAB1Q9NY15 2570 aa3.11□□□□□ -1.91
CDH8-206ENST00000580044 F8P00451 2351 aa3.1□□□□□ -1.91
CDH8-206ENST00000580044 NBEAL1Q6ZS30 2694 aa3.1□□□□□ -1.91
CDH8-206ENST00000580044 A0A087X002 238 aa3.1□□□□□ -1.91
CDH8-206ENST00000580044 KRTAP13-3Q3SY46 172 aa3.1□□□□□ -1.91
CDH8-206ENST00000580044 C7orf65Q6ZTY9 151 aa3.1□□□□□ -1.91
CDH8-206ENST00000580044 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
CDH8-206ENST00000580044 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.91
CDH8-206ENST00000580044 LINC00313P59037 77 aa3.08□□□□□ -1.92
CDH8-206ENST00000580044 C1orf134Q5TEV5 83 aa3.08□□□□□ -1.92
CDH8-206ENST00000580044 CIRBP-AS1Q8TBR5 109 aa3.08□□□□□ -1.92
CDH8-206ENST00000580044 A8MU10 97 aa3.07□□□□□ -1.92
CDH8-206ENST00000580044 SPINK7P58062 85 aa3.07□□□□□ -1.92
CDH8-206ENST00000580044 Q5W150 140 aa3.07□□□□□ -1.92
CDH8-206ENST00000580044 NOTCH2NLQ7Z3S9 236 aa3.07□□□□□ -1.92
CDH8-206ENST00000580044 NOTCH1P46531 2555 aa3.07□□□□□ -1.92
CDH8-206ENST00000580044 FBN1P35555 2871 aaKnown RBP3.07□□□□□ -1.92
CDH8-206ENST00000580044 A0A1B0GU69 56 aa3.06□□□□□ -1.92
CDH8-206ENST00000580044 RBM12B-AS1Q9P1G2 102 aa3.06□□□□□ -1.92
CDH8-206ENST00000580044 TRRAPQ9Y4A5 3859 aa3.05□□□□□ -1.92
CDH8-206ENST00000580044 ANAPC11Q9NYG5 84 aa3.05□□□□□ -1.92
CDH8-206ENST00000580044 STAB2Q8WWQ8 2551 aa3.05□□□□□ -1.92
CDH8-206ENST00000580044 SRRM2Q9UQ35 2752 aaKnown RBP3.04□□□□□ -1.92
CDH8-206ENST00000580044 DNAH1Q9P2D7 4330 aa3.04□□□□□ -1.92
CDH8-206ENST00000580044 COL7A1Q02388 2944 aa3.03□□□□□ -1.92
CDH8-206ENST00000580044 UQCR11O14957 56 aa3.03□□□□□ -1.92
CDH8-206ENST00000580044 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
CDH8-206ENST00000580044 COL6A5A8TX70 2615 aa3.03□□□□□ -1.93
CDH8-206ENST00000580044 DNAH3Q8TD57 4116 aa3.03□□□□□ -1.93
CDH8-206ENST00000580044 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
CDH8-206ENST00000580044 KRTAP16-1A8MUX0 517 aa3□□□□□ -1.93
CDH8-206ENST00000580044 SPINK1P00995 79 aa3□□□□□ -1.93
CDH8-206ENST00000580044 RPS29P62273 56 aaKnown RBP3□□□□□ -1.93
CDH8-206ENST00000580044 MIR22HGQ0VDD5 57 aa3□□□□□ -1.93
CDH8-206ENST00000580044 Q6ZSA8 131 aa3□□□□□ -1.93
CDH8-206ENST00000580044 ANK2Q01484 3957 aa3□□□□□ -1.93
CDH8-206ENST00000580044 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
CDH8-206ENST00000580044 LY6G6CO95867 125 aa2.98□□□□□ -1.93
CDH8-206ENST00000580044 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
CDH8-206ENST00000580044 RETNLBQ9BQ08 111 aa2.97□□□□□ -1.93
CDH8-206ENST00000580044 MGAM2Q2M2H8 2515 aa2.97□□□□□ -1.93
CDH8-206ENST00000580044 HUWE1Q7Z6Z7 4374 aaKnown RBP2.96□□□□□ -1.93
CDH8-206ENST00000580044 FBN3Q75N90 2809 aa2.96□□□□□ -1.94
CDH8-206ENST00000580044 TYMSOSQ8TAI1 123 aa2.96□□□□□ -1.94
CDH8-206ENST00000580044 KRTAP1-4P0C5Y4 121 aa2.95□□□□□ -1.94
CDH8-206ENST00000580044 DNAH9Q9NYC9 4486 aa2.94□□□□□ -1.94
CDH8-206ENST00000580044 MEGF8Q7Z7M0 2845 aa2.94□□□□□ -1.94
CDH8-206ENST00000580044 KRTAP10-1P60331 282 aa2.93□□□□□ -1.94
CDH8-206ENST00000580044 LINC01554Q52M75 96 aa2.93□□□□□ -1.94
CDH8-206ENST00000580044 LINC00304Q8N9R0 145 aa2.93□□□□□ -1.94
CDH8-206ENST00000580044 CMYA5Q8N3K9 4069 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms