RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 A0A1B0GVX0 72 aa13.07□□□□□ -0.32
LIMD2-205ENST00000578402 FAT3Q8TDW7 4589 aa13.03□□□□□ -0.32
LIMD2-205ENST00000578402 SMIM20Q8N5G0 67 aa13.03□□□□□ -0.32
LIMD2-205ENST00000578402 LRP1Q07954 4544 aaKnown RBP13.01□□□□□ -0.33
LIMD2-205ENST00000578402 MMP24-AS1A0A0U1RRL7 71 aa13□□□□□ -0.33
LIMD2-205ENST00000578402 IGHV6-1A0A0B4J1U7 121 aa12.99□□□□□ -0.33
LIMD2-205ENST00000578402 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
LIMD2-205ENST00000578402 C8orf17Q9NRJ1 99 aa12.98□□□□□ -0.33
LIMD2-205ENST00000578402 TNXBP22105 4242 aa12.98□□□□□ -0.33
LIMD2-205ENST00000578402 CASC2Q6XLA1 102 aa12.98□□□□□ -0.33
LIMD2-205ENST00000578402 WFDC13Q8IUB5 93 aa12.97□□□□□ -0.33
LIMD2-205ENST00000578402 SERP2Q8N6R1 65 aa12.96□□□□□ -0.33
LIMD2-205ENST00000578402 HERC1Q15751 4861 aa12.95□□□□□ -0.34
LIMD2-205ENST00000578402 C8orf87E5RJ46 101 aa12.95□□□□□ -0.34
LIMD2-205ENST00000578402 TRAV7A0A075B6U4 112 aa12.93□□□□□ -0.34
LIMD2-205ENST00000578402 hDV103S1A0JD37 113 aa12.93□□□□□ -0.34
LIMD2-205ENST00000578402 OXTP01178 125 aa12.93□□□□□ -0.34
LIMD2-205ENST00000578402 OCR1Q9BZK8 76 aa12.91□□□□□ -0.34
LIMD2-205ENST00000578402 COX7CP15954 63 aa12.9□□□□□ -0.34
LIMD2-205ENST00000578402 MT1HL1P0DM35 61 aa12.88□□□□□ -0.35
LIMD2-205ENST00000578402 TMEM254Q8TBM7 123 aa12.88□□□□□ -0.35
LIMD2-205ENST00000578402 UQCRQO14949 82 aa12.87□□□□□ -0.35
LIMD2-205ENST00000578402 NOTCH2NLQ7Z3S9 236 aa12.87□□□□□ -0.35
LIMD2-205ENST00000578402 FLG2Q5D862 2391 aaPredicted RBP12.86□□□□□ -0.35
LIMD2-205ENST00000578402 LINC00313P59037 77 aa12.84□□□□□ -0.35
LIMD2-205ENST00000578402 MYCBP2O75592 4640 aa12.84□□□□□ -0.35
LIMD2-205ENST00000578402 MRPL34Q9BQ48 92 aaKnown RBP12.83□□□□□ -0.35
LIMD2-205ENST00000578402 DMBT1Q9UGM3 2413 aaPredicted RBP12.8□□□□□ -0.36
LIMD2-205ENST00000578402 CCDC179H3BU77 68 aa12.78□□□□□ -0.36
LIMD2-205ENST00000578402 TP53AIP1Q9HCN2 124 aa12.76□□□□□ -0.37
LIMD2-205ENST00000578402 RETNLBQ9BQ08 111 aa12.74□□□□□ -0.37
LIMD2-205ENST00000578402 KRTAP16-1A8MUX0 517 aa12.72□□□□□ -0.37
LIMD2-205ENST00000578402 FP248Q71RG6 208 aaPredicted RBP12.72□□□□□ -0.37
LIMD2-205ENST00000578402 C5orf47Q569G3 176 aa12.71□□□□□ -0.38
LIMD2-205ENST00000578402 Q8N9P0 234 aaPredicted RBP12.7□□□□□ -0.38
LIMD2-205ENST00000578402 NDUFS5O43920 106 aa12.69□□□□□ -0.38
LIMD2-205ENST00000578402 C20orf197Q8N268 126 aa12.67□□□□□ -0.38
LIMD2-205ENST00000578402 KLKP1Q107X0 134 aa12.64□□□□□ -0.39
LIMD2-205ENST00000578402 TRAV22A0A0B4J277 110 aa12.62□□□□□ -0.39
LIMD2-205ENST00000578402 MP68P56378 58 aa12.62□□□□□ -0.39
LIMD2-205ENST00000578402 A0A0U1RQV1 116 aa12.61□□□□□ -0.39
LIMD2-205ENST00000578402 H3BPC8 53 aa12.59□□□□□ -0.39
LIMD2-205ENST00000578402 H0Y9P7 68 aa12.58□□□□□ -0.4
LIMD2-205ENST00000578402 C9orf92A6NGG3 77 aa12.57□□□□□ -0.4
LIMD2-205ENST00000578402 IGLV7-46A0A075B6I9 117 aa12.55□□□□□ -0.4
LIMD2-205ENST00000578402 SNURFQ9Y675 71 aa12.55□□□□□ -0.4
LIMD2-205ENST00000578402 ZCCHC13Q8WW36 166 aaKnown RBP12.53□□□□□ -0.4
LIMD2-205ENST00000578402 J3QL48 77 aa12.52□□□□□ -0.4
LIMD2-205ENST00000578402 C20orf166-AS1Q96NR2 134 aa12.52□□□□□ -0.4
LIMD2-205ENST00000578402 NDUFC1O43677 76 aa12.52□□□□□ -0.41
LIMD2-205ENST00000578402 CYSTM1Q9H1C7 97 aa12.52□□□□□ -0.41
LIMD2-205ENST00000578402 KRTAP13-3Q3SY46 172 aa12.51□□□□□ -0.41
LIMD2-205ENST00000578402 A8MUU9 505 aa12.5□□□□□ -0.41
LIMD2-205ENST00000578402 LINC00208Q96KT6 92 aa12.5□□□□□ -0.41
LIMD2-205ENST00000578402 Q5W150 140 aa12.48□□□□□ -0.41
LIMD2-205ENST00000578402 C1orf64Q8NEQ6 169 aa12.47□□□□□ -0.41
LIMD2-205ENST00000578402 PRR4Q16378 134 aa12.44□□□□□ -0.42
LIMD2-205ENST00000578402 H7BZZ5 65 aa12.43□□□□□ -0.42
LIMD2-205ENST00000578402 Q75L30 129 aa12.42□□□□□ -0.42
LIMD2-205ENST00000578402 LOC101927531A0A1B0GV80 90 aa12.41□□□□□ -0.42
LIMD2-205ENST00000578402 TMEM258P61165 79 aa12.39□□□□□ -0.43
LIMD2-205ENST00000578402 TPRXLQ17RH7 258 aa12.37□□□□□ -0.43
LIMD2-205ENST00000578402 XP32Q5T750 250 aa12.33□□□□□ -0.44
LIMD2-205ENST00000578402 HMCN2Q8NDA2 5059 aa12.31□□□□□ -0.44
LIMD2-205ENST00000578402 IGKV2-30P06310 120 aa12.3□□□□□ -0.44
LIMD2-205ENST00000578402 UBR4Q5T4S7 5183 aa12.3□□□□□ -0.44
LIMD2-205ENST00000578402 RPL37P61927 97 aaKnown RBP12.29□□□□□ -0.44
LIMD2-205ENST00000578402 CYP4F30PQ9H0H9 118 aa12.29□□□□□ -0.44
LIMD2-205ENST00000578402 ATP5EP56381 51 aaPredicted RBP12.25□□□□□ -0.45
LIMD2-205ENST00000578402 FAM236DA0A1B0GTK5 79 aa12.24□□□□□ -0.45
LIMD2-205ENST00000578402 FAM236CP0DP71 79 aa12.24□□□□□ -0.45
LIMD2-205ENST00000578402 ATP11AUNQ6ZP68 121 aa12.21□□□□□ -0.45
LIMD2-205ENST00000578402 SPANXA2-OT1Q8N9U9 137 aa12.21□□□□□ -0.45
LIMD2-205ENST00000578402 PCOTHQ58A44 107 aa12.2□□□□□ -0.46
LIMD2-205ENST00000578402 IGKV2D-30A0A075B6S6 120 aa12.19□□□□□ -0.46
LIMD2-205ENST00000578402 C7orf65Q6ZTY9 151 aa12.19□□□□□ -0.46
LIMD2-205ENST00000578402 HRES1P13985 223 aa12.07□□□□□ -0.48
LIMD2-205ENST00000578402 SPINK7P58062 85 aa12.06□□□□□ -0.48
LIMD2-205ENST00000578402 LPAP08519 4548 aa12.05□□□□□ -0.48
LIMD2-205ENST00000578402 LRP2P98164 4655 aa12.03□□□□□ -0.48
LIMD2-205ENST00000578402 SERP1Q9Y6X1 66 aa11.99□□□□□ -0.49
LIMD2-205ENST00000578402 RPS28P62857 69 aaKnown RBP11.97□□□□□ -0.49
LIMD2-205ENST00000578402 SEC61BP60468 96 aaKnown RBP11.94□□□□□ -0.5
LIMD2-205ENST00000578402 DMAC1Q96GE9 116 aa11.93□□□□□ -0.5
LIMD2-205ENST00000578402 RNF213Q63HN8 5207 aa11.87□□□□□ -0.51
LIMD2-205ENST00000578402 C4orf26Q17RF5 130 aa11.86□□□□□ -0.51
LIMD2-205ENST00000578402 A8MUN3 132 aa11.85□□□□□ -0.51
LIMD2-205ENST00000578402 ACYP2P14621 99 aa11.85□□□□□ -0.51
LIMD2-205ENST00000578402 MUC17Q685J3 4493 aa11.81□□□□□ -0.52
LIMD2-205ENST00000578402 COA5Q86WW8 74 aa11.8□□□□□ -0.52
LIMD2-205ENST00000578402 COX6B2Q6YFQ2 88 aa11.78□□□□□ -0.52
LIMD2-205ENST00000578402 KRTAP3-1Q9BYR8 98 aa11.72□□□□□ -0.53
LIMD2-205ENST00000578402 MPLKIPQ8TAP9 179 aa11.69□□□□□ -0.54
LIMD2-205ENST00000578402 SMIM26A0A096LP01 95 aa11.67□□□□□ -0.54
LIMD2-205ENST00000578402 CHKB-CPT1BH3BT56 60 aa11.64□□□□□ -0.55
LIMD2-205ENST00000578402 RBM12B-AS1Q9P1G2 102 aa11.62□□□□□ -0.55
LIMD2-205ENST00000578402 KRTAP4-1Q9BYQ7 146 aa11.6□□□□□ -0.55
LIMD2-205ENST00000578402 H1FX-AS1Q4G0G2 97 aa11.5□□□□□ -0.57
LIMD2-205ENST00000578402 Q1T7F1 81 aa11.46□□□□□ -0.57
LIMD2-205ENST00000578402 SPTSSBQ8NFR3 76 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms