RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 NAA38Q9BRA0 125 aaKnown RBP11.75□□□□□ -0.53
VAPA-205ENST00000578314 TRBV20-1A0A075B6N2 111 aa11.72□□□□□ -0.53
VAPA-205ENST00000578314 A0A1B0GVX0 72 aa11.71□□□□□ -0.53
VAPA-205ENST00000578314 Q6ZQT0 140 aa11.71□□□□□ -0.53
VAPA-205ENST00000578314 C8orf87E5RJ46 101 aa11.7□□□□□ -0.54
VAPA-205ENST00000578314 JMJD7-PLA2G4BH0Y9G9 81 aa11.7□□□□□ -0.54
VAPA-205ENST00000578314 J3KT08 172 aa11.69□□□□□ -0.54
VAPA-205ENST00000578314 BATFQ16520 125 aa11.67□□□□□ -0.54
VAPA-205ENST00000578314 LOC110117498A0A087WWA1 95 aa11.66□□□□□ -0.54
VAPA-205ENST00000578314 A0A1B0GW54 56 aa11.65□□□□□ -0.54
VAPA-205ENST00000578314 LYRM7Q5U5X0 104 aa11.65□□□□□ -0.54
VAPA-205ENST00000578314 PDE6GP18545 87 aa11.63□□□□□ -0.55
VAPA-205ENST00000578314 MPLKIPQ8TAP9 179 aa11.58□□□□□ -0.56
VAPA-205ENST00000578314 NDUFB1O75438 58 aa11.57□□□□□ -0.56
VAPA-205ENST00000578314 HRES1P13985 223 aa11.57□□□□□ -0.56
VAPA-205ENST00000578314 C14orf132Q9NPU4 83 aa11.56□□□□□ -0.56
VAPA-205ENST00000578314 A8MWP4 228 aa11.53□□□□□ -0.56
VAPA-205ENST00000578314 Q8N9P0 234 aaPredicted RBP11.52□□□□□ -0.57
VAPA-205ENST00000578314 ZCCHC13Q8WW36 166 aaKnown RBP11.52□□□□□ -0.57
VAPA-205ENST00000578314 RBM12B-AS1Q9P1G2 102 aa11.52□□□□□ -0.57
VAPA-205ENST00000578314 FAM236DA0A1B0GTK5 79 aa11.5□□□□□ -0.57
VAPA-205ENST00000578314 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
VAPA-205ENST00000578314 FAM236CP0DP71 79 aa11.5□□□□□ -0.57
VAPA-205ENST00000578314 KRTAP9-8Q9BYQ0 159 aa11.5□□□□□ -0.57
VAPA-205ENST00000578314 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
VAPA-205ENST00000578314 C8orf17Q9NRJ1 99 aa11.49□□□□□ -0.57
VAPA-205ENST00000578314 TAX1BP3O14907 124 aa11.46□□□□□ -0.57
VAPA-205ENST00000578314 NREPQ16612 68 aa11.46□□□□□ -0.57
VAPA-205ENST00000578314 A0A1W2PPM0 123 aa11.44□□□□□ -0.58
VAPA-205ENST00000578314 H3BT86 120 aa11.44□□□□□ -0.58
VAPA-205ENST00000578314 PRR15Q8IV56 129 aa11.43□□□□□ -0.58
VAPA-205ENST00000578314 SPINK7P58062 85 aa11.42□□□□□ -0.58
VAPA-205ENST00000578314 Q6ZVQ6 151 aa11.4□□□□□ -0.58
VAPA-205ENST00000578314 MTURNQ8N3F0 131 aa11.36□□□□□ -0.59
VAPA-205ENST00000578314 USH2AO75445 5202 aa11.36□□□□□ -0.59
VAPA-205ENST00000578314 MMP24-AS1A0A0U1RRL7 71 aa11.33□□□□□ -0.6
VAPA-205ENST00000578314 COL5A1-AS1Q5SY13 56 aa11.33□□□□□ -0.6
VAPA-205ENST00000578314 MT2AP02795 61 aa11.31□□□□□ -0.6
VAPA-205ENST00000578314 TMEM254Q8TBM7 123 aa11.31□□□□□ -0.6
VAPA-205ENST00000578314 SPCS1Q9Y6A9 102 aa11.31□□□□□ -0.6
VAPA-205ENST00000578314 MRPL34Q9BQ48 92 aaKnown RBP11.3□□□□□ -0.6
VAPA-205ENST00000578314 K7EQZ3 153 aa11.28□□□□□ -0.6
VAPA-205ENST00000578314 SSPOA2VEC9 5147 aa11.28□□□□□ -0.6
VAPA-205ENST00000578314 hDV103S1A0JD37 113 aa11.25□□□□□ -0.61
VAPA-205ENST00000578314 BPY2O14599 106 aa11.24□□□□□ -0.61
VAPA-205ENST00000578314 WFDC13Q8IUB5 93 aa11.23□□□□□ -0.61
VAPA-205ENST00000578314 MT1FP04733 61 aa11.22□□□□□ -0.61
VAPA-205ENST00000578314 SMCPP49901 116 aaPredicted RBP11.21□□□□□ -0.61
VAPA-205ENST00000578314 PCP4L1A6NKN8 68 aa11.2□□□□□ -0.62
VAPA-205ENST00000578314 NDUFS5O43920 106 aa11.16□□□□□ -0.62
VAPA-205ENST00000578314 KRTAP10-10P60014 251 aa11.16□□□□□ -0.62
VAPA-205ENST00000578314 K7EP34 96 aa11.15□□□□□ -0.62
VAPA-205ENST00000578314 KRTAP9-3Q9BYQ3 159 aa11.13□□□□□ -0.63
VAPA-205ENST00000578314 PRO0461Q9UI25 63 aa11.13□□□□□ -0.63
VAPA-205ENST00000578314 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.12□□□□□ -0.63
VAPA-205ENST00000578314 Q8N9L7 120 aa11.1□□□□□ -0.63
VAPA-205ENST00000578314 GTF2H5Q6ZYL4 71 aa11.09□□□□□ -0.63
VAPA-205ENST00000578314 Q5W150 140 aa11.08□□□□□ -0.64
VAPA-205ENST00000578314 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
VAPA-205ENST00000578314 LCE2BO14633 110 aa11.07□□□□□ -0.64
VAPA-205ENST00000578314 LINC00846Q9NV44 126 aa11.05□□□□□ -0.64
VAPA-205ENST00000578314 KRTAP9-7A8MTY7 169 aa11.03□□□□□ -0.64
VAPA-205ENST00000578314 H1FX-AS1Q4G0G2 97 aa11.03□□□□□ -0.64
VAPA-205ENST00000578314 UBL5Q9BZL1 73 aa11.03□□□□□ -0.64
VAPA-205ENST00000578314 FCGBPQ9Y6R7 5405 aaPredicted RBP11.03□□□□□ -0.64
VAPA-205ENST00000578314 IGKV2D-30A0A075B6S6 120 aa11.02□□□□□ -0.65
VAPA-205ENST00000578314 IGKV2-30P06310 120 aa11.02□□□□□ -0.65
VAPA-205ENST00000578314 HCG22E2RYF7 251 aa11.01□□□□□ -0.65
VAPA-205ENST00000578314 C7orf65Q6ZTY9 151 aa11.01□□□□□ -0.65
VAPA-205ENST00000578314 CXCL6P80162 114 aa10.97□□□□□ -0.65
VAPA-205ENST00000578314 F8W1H4 67 aa10.96□□□□□ -0.65
VAPA-205ENST00000578314 KRTAP19-1Q8IUB9 90 aa10.96□□□□□ -0.65
VAPA-205ENST00000578314 ETDBQ3ZM63 59 aa10.87□□□□□ -0.67
VAPA-205ENST00000578314 C4orf26Q17RF5 130 aa10.84□□□□□ -0.67
VAPA-205ENST00000578314 TP53AIP1Q9HCN2 124 aa10.76□□□□□ -0.69
VAPA-205ENST00000578314 KRTAP3-1Q9BYR8 98 aa10.73□□□□□ -0.69
VAPA-205ENST00000578314 MACF1Q9UPN3 7388 aaKnown RBP10.73□□□□□ -0.69
VAPA-205ENST00000578314 KRTAP19-6Q3LI70 58 aa10.71□□□□□ -0.69
VAPA-205ENST00000578314 ACYP1P07311 99 aa10.66□□□□□ -0.7
VAPA-205ENST00000578314 C1orf64Q8NEQ6 169 aa10.66□□□□□ -0.7
VAPA-205ENST00000578314 SYNE2Q8WXH0 6885 aaKnown RBP10.65□□□□□ -0.7
VAPA-205ENST00000578314 C5orf47Q569G3 176 aa10.62□□□□□ -0.71
VAPA-205ENST00000578314 FAM240AA0A1B0GVK7 77 aa10.6□□□□□ -0.71
VAPA-205ENST00000578314 S4R3F8 94 aa10.6□□□□□ -0.71
VAPA-205ENST00000578314 A0A1B0GV90 55 aa10.57□□□□□ -0.72
VAPA-205ENST00000578314 CSAG1Q6PB30 78 aa10.56□□□□□ -0.72
VAPA-205ENST00000578314 CYP4F30PQ9H0H9 118 aa10.55□□□□□ -0.72
VAPA-205ENST00000578314 LCA10Q71F78 164 aa10.54□□□□□ -0.72
VAPA-205ENST00000578314 ATP5EP2Q5VTU8 51 aa10.53□□□□□ -0.72
VAPA-205ENST00000578314 TRAV22A0A0B4J277 110 aa10.5□□□□□ -0.73
VAPA-205ENST00000578314 LOC101927531A0A1B0GV80 90 aa10.48□□□□□ -0.73
VAPA-205ENST00000578314 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
VAPA-205ENST00000578314 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
VAPA-205ENST00000578314 HIST1H4AP62805 103 aaKnown RBP10.44□□□□□ -0.74
VAPA-205ENST00000578314 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
VAPA-205ENST00000578314 UQCRQO14949 82 aa10.4□□□□□ -0.74
VAPA-205ENST00000578314 LINC00643Q86TS7 51 aa10.4□□□□□ -0.74
VAPA-205ENST00000578314 SPRR2GQ9BYE4 73 aa10.36□□□□□ -0.75
VAPA-205ENST00000578314 ATOX1O00244 68 aa10.35□□□□□ -0.75
VAPA-205ENST00000578314 A0A087WVE0 104 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms