RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 VPS25Q9BRG1 176 aa6.46□□□□□ -1.38
TRAPPC8-204ENST00000578252 HRCT1Q6UXD1 115 aa6.45□□□□□ -1.38
TRAPPC8-204ENST00000578252 A0A0G2JQZ4 141 aa6.44□□□□□ -1.38
TRAPPC8-204ENST00000578252 TRBV7-7A0A0K0K1E9 115 aa6.44□□□□□ -1.38
TRAPPC8-204ENST00000578252 CCKP06307 115 aa6.44□□□□□ -1.38
TRAPPC8-204ENST00000578252 Q5XG85 94 aa6.44□□□□□ -1.38
TRAPPC8-204ENST00000578252 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
TRAPPC8-204ENST00000578252 A0A1B0GW54 56 aa6.43□□□□□ -1.38
TRAPPC8-204ENST00000578252 Q6ZQT0 140 aa6.43□□□□□ -1.38
TRAPPC8-204ENST00000578252 A0A1W2PNM2 257 aa6.42□□□□□ -1.38
TRAPPC8-204ENST00000578252 SS18L2Q9UHA2 77 aa6.42□□□□□ -1.38
TRAPPC8-204ENST00000578252 ETDBQ3ZM63 59 aa6.4□□□□□ -1.38
TRAPPC8-204ENST00000578252 ASB16-AS1Q495Z4 193 aa6.39□□□□□ -1.39
TRAPPC8-204ENST00000578252 A0A087WSZ3 146 aa6.38□□□□□ -1.39
TRAPPC8-204ENST00000578252 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC8-204ENST00000578252 C1orf195Q5TG92 126 aa6.33□□□□□ -1.4
TRAPPC8-204ENST00000578252 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
TRAPPC8-204ENST00000578252 PRR4Q16378 134 aa6.3□□□□□ -1.4
TRAPPC8-204ENST00000578252 NREPQ16612 68 aa6.3□□□□□ -1.4
TRAPPC8-204ENST00000578252 ACYP1P07311 99 aa6.29□□□□□ -1.4
TRAPPC8-204ENST00000578252 HERC1Q15751 4861 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 FAM240AA0A1B0GVK7 77 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 J3KT08 172 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 J3QR89 54 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 Q96NJ1 140 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 SIGMAR1Q99720 223 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 UBL5Q9BZL1 73 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
TRAPPC8-204ENST00000578252 IGKV4-1P06312 121 aa6.25□□□□□ -1.41
TRAPPC8-204ENST00000578252 LINC00846Q9NV44 126 aa6.25□□□□□ -1.41
TRAPPC8-204ENST00000578252 Q6ZVQ6 151 aa6.24□□□□□ -1.41
TRAPPC8-204ENST00000578252 TPRXLQ17RH7 258 aa6.23□□□□□ -1.41
TRAPPC8-204ENST00000578252 DEFB116Q30KQ4 102 aa6.22□□□□□ -1.41
TRAPPC8-204ENST00000578252 BPY2O14599 106 aa6.21□□□□□ -1.42
TRAPPC8-204ENST00000578252 NDUFB1O75438 58 aa6.21□□□□□ -1.42
TRAPPC8-204ENST00000578252 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
TRAPPC8-204ENST00000578252 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
TRAPPC8-204ENST00000578252 A8MWP4 228 aa6.19□□□□□ -1.42
TRAPPC8-204ENST00000578252 A0A1B0GVX0 72 aa6.18□□□□□ -1.42
TRAPPC8-204ENST00000578252 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
TRAPPC8-204ENST00000578252 DSCR10P59022 87 aa6.16□□□□□ -1.42
TRAPPC8-204ENST00000578252 CXCL6P80162 114 aa6.16□□□□□ -1.42
TRAPPC8-204ENST00000578252 ATP5EP2Q5VTU8 51 aa6.16□□□□□ -1.42
TRAPPC8-204ENST00000578252 IGHV6-1A0A0B4J1U7 121 aa6.15□□□□□ -1.42
TRAPPC8-204ENST00000578252 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.42
TRAPPC8-204ENST00000578252 C9orf92A6NGG3 77 aa6.15□□□□□ -1.42
TRAPPC8-204ENST00000578252 LINC00313P59037 77 aa6.15□□□□□ -1.42
TRAPPC8-204ENST00000578252 PRR15Q8IV56 129 aa6.15□□□□□ -1.42
TRAPPC8-204ENST00000578252 LINC00643Q86TS7 51 aa6.14□□□□□ -1.43
TRAPPC8-204ENST00000578252 K7EQZ3 153 aa6.13□□□□□ -1.43
TRAPPC8-204ENST00000578252 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
TRAPPC8-204ENST00000578252 Q8N9L7 120 aa6.08□□□□□ -1.44
TRAPPC8-204ENST00000578252 MMP24-AS1A0A0U1RRL7 71 aa6.07□□□□□ -1.44
TRAPPC8-204ENST00000578252 NOTCH2NLQ7Z3S9 236 aa6.07□□□□□ -1.44
TRAPPC8-204ENST00000578252 LPAP08519 4548 aa6.07□□□□□ -1.44
TRAPPC8-204ENST00000578252 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
TRAPPC8-204ENST00000578252 Q75L30 129 aa6.06□□□□□ -1.44
TRAPPC8-204ENST00000578252 TMEM254Q8TBM7 123 aa6.06□□□□□ -1.44
TRAPPC8-204ENST00000578252 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
TRAPPC8-204ENST00000578252 LRP2P98164 4655 aa6.05□□□□□ -1.44
TRAPPC8-204ENST00000578252 hDV103S1A0JD37 113 aa6.05□□□□□ -1.44
TRAPPC8-204ENST00000578252 A8MUU9 505 aa6.05□□□□□ -1.44
TRAPPC8-204ENST00000578252 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
TRAPPC8-204ENST00000578252 HCG22E2RYF7 251 aa6.04□□□□□ -1.44
TRAPPC8-204ENST00000578252 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
TRAPPC8-204ENST00000578252 C5orf47Q569G3 176 aa6.04□□□□□ -1.44
TRAPPC8-204ENST00000578252 CASC2Q6XLA1 102 aa6.04□□□□□ -1.44
TRAPPC8-204ENST00000578252 HIST1H4AP62805 103 aaKnown RBP6.03□□□□□ -1.44
TRAPPC8-204ENST00000578252 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
TRAPPC8-204ENST00000578252 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC8-204ENST00000578252 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
TRAPPC8-204ENST00000578252 ANAPC13Q9BS18 74 aa6.01□□□□□ -1.45
TRAPPC8-204ENST00000578252 ATP11AUNQ6ZP68 121 aa6□□□□□ -1.45
TRAPPC8-204ENST00000578252 IMUPQ9GZP8 106 aa5.99□□□□□ -1.45
TRAPPC8-204ENST00000578252 NDUFS5O43920 106 aa5.97□□□□□ -1.45
TRAPPC8-204ENST00000578252 MT-ATP8P03928 68 aa5.96□□□□□ -1.46
TRAPPC8-204ENST00000578252 A0A087WVE0 104 aa5.95□□□□□ -1.46
TRAPPC8-204ENST00000578252 PCOTHQ58A44 107 aa5.95□□□□□ -1.46
TRAPPC8-204ENST00000578252 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
TRAPPC8-204ENST00000578252 SMIM20Q8N5G0 67 aa5.94□□□□□ -1.46
TRAPPC8-204ENST00000578252 ZCCHC13Q8WW36 166 aaKnown RBP5.94□□□□□ -1.46
TRAPPC8-204ENST00000578252 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
TRAPPC8-204ENST00000578252 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
TRAPPC8-204ENST00000578252 RPS28P62857 69 aaKnown RBP5.9□□□□□ -1.46
TRAPPC8-204ENST00000578252 UQCRQO14949 82 aa5.86□□□□□ -1.47
TRAPPC8-204ENST00000578252 FAM236AA0A1B0GUQ0 79 aa5.85□□□□□ -1.47
TRAPPC8-204ENST00000578252 FAM236BA0A1B0GV22 79 aa5.85□□□□□ -1.47
TRAPPC8-204ENST00000578252 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
TRAPPC8-204ENST00000578252 Q5W150 140 aa5.84□□□□□ -1.47
TRAPPC8-204ENST00000578252 TRAV22A0A0B4J277 110 aa5.83□□□□□ -1.48
TRAPPC8-204ENST00000578252 OCR1Q9BZK8 76 aa5.83□□□□□ -1.48
TRAPPC8-204ENST00000578252 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
TRAPPC8-204ENST00000578252 ATOX1O00244 68 aa5.81□□□□□ -1.48
TRAPPC8-204ENST00000578252 SPINK7P58062 85 aa5.8□□□□□ -1.48
TRAPPC8-204ENST00000578252 C7orf65Q6ZTY9 151 aa5.8□□□□□ -1.48
TRAPPC8-204ENST00000578252 IGKV2D-30A0A075B6S6 120 aa5.78□□□□□ -1.48
TRAPPC8-204ENST00000578252 A0A0U1RQV1 116 aa5.78□□□□□ -1.48
TRAPPC8-204ENST00000578252 H0Y9P7 68 aa5.78□□□□□ -1.48
TRAPPC8-204ENST00000578252 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms