RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 A0A1B0GVX0 72 aa6.96□□□□□ -1.3
SMARCD2-205ENST00000577686 A8MWP4 228 aa6.96□□□□□ -1.3
SMARCD2-205ENST00000577686 VAMP8Q9BV40 100 aa6.96□□□□□ -1.3
SMARCD2-205ENST00000577686 PAM16Q9Y3D7 125 aa6.96□□□□□ -1.3
SMARCD2-205ENST00000577686 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
SMARCD2-205ENST00000577686 J3KT08 172 aa6.94□□□□□ -1.3
SMARCD2-205ENST00000577686 VPS25Q9BRG1 176 aa6.94□□□□□ -1.3
SMARCD2-205ENST00000577686 UBE2V1Q13404 147 aa6.93□□□□□ -1.3
SMARCD2-205ENST00000577686 C2orf91Q6ZV80 131 aa6.93□□□□□ -1.3
SMARCD2-205ENST00000577686 SPINK7P58062 85 aa6.92□□□□□ -1.3
SMARCD2-205ENST00000577686 LYRM7Q5U5X0 104 aa6.92□□□□□ -1.3
SMARCD2-205ENST00000577686 NDUFB1O75438 58 aa6.91□□□□□ -1.3
SMARCD2-205ENST00000577686 FXYD2P54710 66 aa6.9□□□□□ -1.3
SMARCD2-205ENST00000577686 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
SMARCD2-205ENST00000577686 DSCR8Q96T75 97 aa6.9□□□□□ -1.3
SMARCD2-205ENST00000577686 RBM3P98179 157 aaKnown RBP6.89□□□□□ -1.31
SMARCD2-205ENST00000577686 HSD52Q0P140 79 aa6.86□□□□□ -1.31
SMARCD2-205ENST00000577686 WFDC13Q8IUB5 93 aa6.86□□□□□ -1.31
SMARCD2-205ENST00000577686 C9JAW5 83 aa6.83□□□□□ -1.32
SMARCD2-205ENST00000577686 Q8N9P0 234 aaPredicted RBP6.83□□□□□ -1.32
SMARCD2-205ENST00000577686 MACF1Q9UPN3 7388 aaKnown RBP6.82□□□□□ -1.32
SMARCD2-205ENST00000577686 K7ERJ3 54 aa6.81□□□□□ -1.32
SMARCD2-205ENST00000577686 SCGB1C2P0DMR2 95 aa6.81□□□□□ -1.32
SMARCD2-205ENST00000577686 Q6ZQT0 140 aa6.79□□□□□ -1.32
SMARCD2-205ENST00000577686 C8orf17Q9NRJ1 99 aa6.79□□□□□ -1.32
SMARCD2-205ENST00000577686 A0A1B0GW54 56 aa6.78□□□□□ -1.32
SMARCD2-205ENST00000577686 IGKV3D-7A0A0C4DH55 119 aa6.76□□□□□ -1.33
SMARCD2-205ENST00000577686 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
SMARCD2-205ENST00000577686 BAALC-AS2P0C853 105 aa6.75□□□□□ -1.33
SMARCD2-205ENST00000577686 Q6ZVQ6 151 aa6.75□□□□□ -1.33
SMARCD2-205ENST00000577686 SYNE2Q8WXH0 6885 aaKnown RBP6.75□□□□□ -1.33
SMARCD2-205ENST00000577686 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
SMARCD2-205ENST00000577686 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
SMARCD2-205ENST00000577686 PDE6GP18545 87 aa6.73□□□□□ -1.33
SMARCD2-205ENST00000577686 UQCR10Q9UDW1 63 aa6.7□□□□□ -1.34
SMARCD2-205ENST00000577686 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
SMARCD2-205ENST00000577686 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
SMARCD2-205ENST00000577686 ATXN8Q156A1 80 aa6.68□□□□□ -1.34
SMARCD2-205ENST00000577686 PRR15Q8IV56 129 aa6.68□□□□□ -1.34
SMARCD2-205ENST00000577686 MRPL34Q9BQ48 92 aaKnown RBP6.68□□□□□ -1.34
SMARCD2-205ENST00000577686 NDUFS5O43920 106 aa6.66□□□□□ -1.34
SMARCD2-205ENST00000577686 NREPQ16612 68 aa6.66□□□□□ -1.34
SMARCD2-205ENST00000577686 C7orf65Q6ZTY9 151 aa6.63□□□□□ -1.35
SMARCD2-205ENST00000577686 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
SMARCD2-205ENST00000577686 MMP24-AS1A0A0U1RRL7 71 aa6.62□□□□□ -1.35
SMARCD2-205ENST00000577686 hDV103S1A0JD37 113 aa6.62□□□□□ -1.35
SMARCD2-205ENST00000577686 IGKV2-30P06310 120 aa6.62□□□□□ -1.35
SMARCD2-205ENST00000577686 PYY3Q5JQD4 70 aa6.62□□□□□ -1.35
SMARCD2-205ENST00000577686 C14orf132Q9NPU4 83 aa6.6□□□□□ -1.35
SMARCD2-205ENST00000577686 FAM236AA0A1B0GUQ0 79 aa6.57□□□□□ -1.36
SMARCD2-205ENST00000577686 FAM236BA0A1B0GV22 79 aa6.57□□□□□ -1.36
SMARCD2-205ENST00000577686 M0R143 59 aa6.56□□□□□ -1.36
SMARCD2-205ENST00000577686 A6NN06 94 aa6.55□□□□□ -1.36
SMARCD2-205ENST00000577686 K7EQZ3 153 aa6.54□□□□□ -1.36
SMARCD2-205ENST00000577686 BPY2O14599 106 aa6.52□□□□□ -1.37
SMARCD2-205ENST00000577686 Q5VV11 94 aa6.51□□□□□ -1.37
SMARCD2-205ENST00000577686 CXCL6P80162 114 aa6.48□□□□□ -1.37
SMARCD2-205ENST00000577686 C4orf26Q17RF5 130 aa6.48□□□□□ -1.37
SMARCD2-205ENST00000577686 C5orf47Q569G3 176 aa6.48□□□□□ -1.37
SMARCD2-205ENST00000577686 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
SMARCD2-205ENST00000577686 NAA38Q9BRA0 125 aaKnown RBP6.48□□□□□ -1.37
SMARCD2-205ENST00000577686 HCG22E2RYF7 251 aa6.46□□□□□ -1.38
SMARCD2-205ENST00000577686 Q5W150 140 aa6.46□□□□□ -1.38
SMARCD2-205ENST00000577686 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
SMARCD2-205ENST00000577686 S4R3F8 94 aa6.45□□□□□ -1.38
SMARCD2-205ENST00000577686 H3BT86 120 aa6.42□□□□□ -1.38
SMARCD2-205ENST00000577686 KRTAP20-1Q3LI63 56 aa6.42□□□□□ -1.38
SMARCD2-205ENST00000577686 NEBP20929 6669 aa6.41□□□□□ -1.38
SMARCD2-205ENST00000577686 TSTD3H0UI37 97 aa6.41□□□□□ -1.38
SMARCD2-205ENST00000577686 MT1BP07438 61 aa6.4□□□□□ -1.38
SMARCD2-205ENST00000577686 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
SMARCD2-205ENST00000577686 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
SMARCD2-205ENST00000577686 TMA7Q9Y2S6 64 aaKnown RBP6.37□□□□□ -1.39
SMARCD2-205ENST00000577686 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
SMARCD2-205ENST00000577686 Q8N9L7 120 aa6.36□□□□□ -1.39
SMARCD2-205ENST00000577686 C1orf64Q8NEQ6 169 aa6.36□□□□□ -1.39
SMARCD2-205ENST00000577686 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
SMARCD2-205ENST00000577686 KLKP1Q107X0 134 aa6.34□□□□□ -1.39
SMARCD2-205ENST00000577686 LCA10Q71F78 164 aa6.33□□□□□ -1.4
SMARCD2-205ENST00000577686 KRTAP5-9P26371 169 aa6.31□□□□□ -1.4
SMARCD2-205ENST00000577686 BATFQ16520 125 aa6.31□□□□□ -1.4
SMARCD2-205ENST00000577686 UBL5Q9BZL1 73 aa6.31□□□□□ -1.4
SMARCD2-205ENST00000577686 CRIPTQ9P021 101 aa6.3□□□□□ -1.4
SMARCD2-205ENST00000577686 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
SMARCD2-205ENST00000577686 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
SMARCD2-205ENST00000577686 C9orf118A6NHY6 69 aa6.27□□□□□ -1.41
SMARCD2-205ENST00000577686 A0A1W2PPM0 123 aa6.26□□□□□ -1.41
SMARCD2-205ENST00000577686 SMIM6P0DI80 62 aa6.24□□□□□ -1.41
SMARCD2-205ENST00000577686 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
SMARCD2-205ENST00000577686 TAX1BP3O14907 124 aa6.17□□□□□ -1.42
SMARCD2-205ENST00000577686 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
SMARCD2-205ENST00000577686 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
SMARCD2-205ENST00000577686 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
SMARCD2-205ENST00000577686 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
SMARCD2-205ENST00000577686 SMCPP49901 116 aaPredicted RBP6.14□□□□□ -1.43
SMARCD2-205ENST00000577686 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
SMARCD2-205ENST00000577686 CYP4F30PQ9H0H9 118 aa6.12□□□□□ -1.43
SMARCD2-205ENST00000577686 KMT2DO14686 5537 aa6.11□□□□□ -1.43
SMARCD2-205ENST00000577686 LOC101927531A0A1B0GV80 90 aa6.11□□□□□ -1.43
SMARCD2-205ENST00000577686 NDUFC1O43677 76 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms