RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 ZNF292O60281 2723 aa7.62□□□□□ -1.19
TFAP4-206ENST00000575320 WDFY3Q8IZQ1 3526 aa7.61□□□□□ -1.19
TFAP4-206ENST00000575320 GCN1Q92616 2671 aaKnown RBP7.61□□□□□ -1.19
TFAP4-206ENST00000575320 COL6A5A8TX70 2615 aa7.59□□□□□ -1.2
TFAP4-206ENST00000575320 NBEAQ8NFP9 2946 aa7.58□□□□□ -1.2
TFAP4-206ENST00000575320 DMXL2Q8TDJ6 3036 aa7.58□□□□□ -1.2
TFAP4-206ENST00000575320 IGSF10Q6WRI0 2623 aa7.55□□□□□ -1.2
TFAP4-206ENST00000575320 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
TFAP4-206ENST00000575320 TNRC18O15417 2968 aaPredicted RBP7.55□□□□□ -1.2
TFAP4-206ENST00000575320 ATMQ13315 3056 aa7.54□□□□□ -1.2
TFAP4-206ENST00000575320 ADGRG4Q8IZF6 3080 aa7.52□□□□□ -1.21
TFAP4-206ENST00000575320 UNC79Q9P2D8 2635 aa7.51□□□□□ -1.21
TFAP4-206ENST00000575320 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
TFAP4-206ENST00000575320 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
TFAP4-206ENST00000575320 TACC2O95359 2948 aa7.48□□□□□ -1.21
TFAP4-206ENST00000575320 STAB2Q8WWQ8 2551 aa7.48□□□□□ -1.21
TFAP4-206ENST00000575320 ASPMQ8IZT6 3477 aa7.46□□□□□ -1.21
TFAP4-206ENST00000575320 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
TFAP4-206ENST00000575320 COL12A1Q99715 3063 aa7.46□□□□□ -1.22
TFAP4-206ENST00000575320 CRYBG3Q68DQ2 2970 aa7.45□□□□□ -1.22
TFAP4-206ENST00000575320 H0YAA0 97 aa7.45□□□□□ -1.22
TFAP4-206ENST00000575320 ASH1LQ9NR48 2969 aaKnown RBP7.45□□□□□ -1.22
TFAP4-206ENST00000575320 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
TFAP4-206ENST00000575320 NOTCH1P46531 2555 aa7.45□□□□□ -1.22
TFAP4-206ENST00000575320 TPRXLQ17RH7 258 aa7.44□□□□□ -1.22
TFAP4-206ENST00000575320 XP32Q5T750 250 aa7.41□□□□□ -1.22
TFAP4-206ENST00000575320 P0C880 135 aa7.39□□□□□ -1.23
TFAP4-206ENST00000575320 ZFHX4Q86UP3 3567 aa7.38□□□□□ -1.23
TFAP4-206ENST00000575320 LOC400499M0QZD8 3231 aa7.37□□□□□ -1.23
TFAP4-206ENST00000575320 DCHS1Q96JQ0 3298 aa7.33□□□□□ -1.24
TFAP4-206ENST00000575320 UBR5O95071 2799 aaPredicted RBP7.32□□□□□ -1.24
TFAP4-206ENST00000575320 ZZEF1O43149 2961 aa7.32□□□□□ -1.24
TFAP4-206ENST00000575320 DMXL1Q9Y485 3027 aa7.29□□□□□ -1.24
TFAP4-206ENST00000575320 KRTAP1-4P0C5Y4 121 aa7.29□□□□□ -1.24
TFAP4-206ENST00000575320 ITPR2Q14571 2701 aa7.29□□□□□ -1.24
TFAP4-206ENST00000575320 ITPR1Q14643 2758 aa7.27□□□□□ -1.25
TFAP4-206ENST00000575320 HIVEP1P15822 2718 aa7.26□□□□□ -1.25
TFAP4-206ENST00000575320 UTP20O75691 2785 aaKnown RBP7.25□□□□□ -1.25
TFAP4-206ENST00000575320 RELNP78509 3460 aa7.24□□□□□ -1.25
TFAP4-206ENST00000575320 CSMD1Q96PZ7 3565 aa7.21□□□□□ -1.25
TFAP4-206ENST00000575320 KMT2BQ9UMN6 2715 aaPredicted RBP7.21□□□□□ -1.25
TFAP4-206ENST00000575320 LAMA5O15230 3695 aa7.21□□□□□ -1.26
TFAP4-206ENST00000575320 APCP25054 2843 aa7.2□□□□□ -1.26
TFAP4-206ENST00000575320 NSD1Q96L73 2696 aaPredicted RBP7.19□□□□□ -1.26
TFAP4-206ENST00000575320 DMDP11532 3685 aa7.16□□□□□ -1.26
TFAP4-206ENST00000575320 KRTAP13-3Q3SY46 172 aa7.13□□□□□ -1.27
TFAP4-206ENST00000575320 CELSR2Q9HCU4 2923 aa7.11□□□□□ -1.27
TFAP4-206ENST00000575320 FLNCQ14315 2725 aa7.1□□□□□ -1.27
TFAP4-206ENST00000575320 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
TFAP4-206ENST00000575320 SMG1Q96Q15 3661 aaKnown RBP7.04□□□□□ -1.28
TFAP4-206ENST00000575320 MUC3AQ02505 3323 aa7.02□□□□□ -1.29
TFAP4-206ENST00000575320 KRTAP12-2P59991 146 aa7□□□□□ -1.29
TFAP4-206ENST00000575320 NBPF19A0A087WUL8 3843 aa7□□□□□ -1.29
TFAP4-206ENST00000575320 DCHS2Q6V1P9 2916 aa6.99□□□□□ -1.29
TFAP4-206ENST00000575320 SVEP1Q4LDE5 3571 aa6.97□□□□□ -1.29
TFAP4-206ENST00000575320 ZANQ9Y493 2812 aa6.96□□□□□ -1.3
TFAP4-206ENST00000575320 HRNRQ86YZ3 2850 aaPredicted RBP6.95□□□□□ -1.3
TFAP4-206ENST00000575320 FBN2P35556 2912 aa6.95□□□□□ -1.3
TFAP4-206ENST00000575320 SPENQ96T58 3664 aaKnown RBP6.91□□□□□ -1.3
TFAP4-206ENST00000575320 CUBNO60494 3623 aa6.91□□□□□ -1.3
TFAP4-206ENST00000575320 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
TFAP4-206ENST00000575320 BSNQ9UPA5 3926 aa6.85□□□□□ -1.31
TFAP4-206ENST00000575320 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
TFAP4-206ENST00000575320 CELSR1Q9NYQ6 3014 aa6.79□□□□□ -1.32
TFAP4-206ENST00000575320 NIPBLQ6KC79 2804 aaeCLIP6.74□□□□□ -1.33
TFAP4-206ENST00000575320 NF1P21359 2839 aa6.73□□□□□ -1.33
TFAP4-206ENST00000575320 CSMD2Q7Z408 3487 aa6.68□□□□□ -1.34
TFAP4-206ENST00000575320 TENM2Q9NT68 2774 aa6.68□□□□□ -1.34
TFAP4-206ENST00000575320 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
TFAP4-206ENST00000575320 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.35
TFAP4-206ENST00000575320 TGP01266 2768 aa6.64□□□□□ -1.35
TFAP4-206ENST00000575320 ZFHX3Q15911 3703 aa6.63□□□□□ -1.35
TFAP4-206ENST00000575320 TENM1Q9UKZ4 2725 aa6.6□□□□□ -1.35
TFAP4-206ENST00000575320 MXRA5Q9NR99 2828 aa6.59□□□□□ -1.35
TFAP4-206ENST00000575320 PKD1L1Q8TDX9 2849 aa6.54□□□□□ -1.36
TFAP4-206ENST00000575320 VWFP04275 2813 aa6.53□□□□□ -1.36
TFAP4-206ENST00000575320 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
TFAP4-206ENST00000575320 TENM3Q9P273 2699 aa6.47□□□□□ -1.37
TFAP4-206ENST00000575320 INE1O15225 51 aa6.44□□□□□ -1.38
TFAP4-206ENST00000575320 ANK3Q12955 4377 aaKnown RBP6.4□□□□□ -1.38
TFAP4-206ENST00000575320 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
TFAP4-206ENST00000575320 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
TFAP4-206ENST00000575320 FBN1P35555 2871 aaKnown RBP6.36□□□□□ -1.39
TFAP4-206ENST00000575320 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
TFAP4-206ENST00000575320 MT1HL1P0DM35 61 aa6.34□□□□□ -1.39
TFAP4-206ENST00000575320 PDZD2O15018 2839 aa6.34□□□□□ -1.4
TFAP4-206ENST00000575320 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
TFAP4-206ENST00000575320 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
TFAP4-206ENST00000575320 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
TFAP4-206ENST00000575320 OTOGQ6ZRI0 2925 aa6.23□□□□□ -1.41
TFAP4-206ENST00000575320 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
TFAP4-206ENST00000575320 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
TFAP4-206ENST00000575320 ALMS1Q8TCU4 4167 aa6.18□□□□□ -1.42
TFAP4-206ENST00000575320 AKAP9Q99996 3911 aa6.16□□□□□ -1.42
TFAP4-206ENST00000575320 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
TFAP4-206ENST00000575320 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.43
TFAP4-206ENST00000575320 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
TFAP4-206ENST00000575320 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
TFAP4-206ENST00000575320 SRRM2Q9UQ35 2752 aaKnown RBP6.07□□□□□ -1.44
TFAP4-206ENST00000575320 FBN3Q75N90 2809 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 211 ms