RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 C8orf87E5RJ46 101 aa6.71□□□□□ -1.34
CDRT1-206ENST00000571263 A0A1B0GVX0 72 aa6.7□□□□□ -1.34
CDRT1-206ENST00000571263 HIST1H4AP62805 103 aaKnown RBP6.69□□□□□ -1.34
CDRT1-206ENST00000571263 K7EQZ3 153 aa6.68□□□□□ -1.34
CDRT1-206ENST00000571263 RETNLBQ9BQ08 111 aa6.68□□□□□ -1.34
CDRT1-206ENST00000571263 IGLV7-46A0A075B6I9 117 aa6.67□□□□□ -1.34
CDRT1-206ENST00000571263 TNXBP22105 4242 aa6.67□□□□□ -1.34
CDRT1-206ENST00000571263 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
CDRT1-206ENST00000571263 MT-ATP8P03928 68 aa6.66□□□□□ -1.34
CDRT1-206ENST00000571263 LINC00313P59037 77 aa6.66□□□□□ -1.34
CDRT1-206ENST00000571263 PRR4Q16378 134 aa6.65□□□□□ -1.34
CDRT1-206ENST00000571263 C8orf17Q9NRJ1 99 aa6.64□□□□□ -1.35
CDRT1-206ENST00000571263 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
CDRT1-206ENST00000571263 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
CDRT1-206ENST00000571263 Q8N9L7 120 aa6.63□□□□□ -1.35
CDRT1-206ENST00000571263 HCG22E2RYF7 251 aa6.62□□□□□ -1.35
CDRT1-206ENST00000571263 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
CDRT1-206ENST00000571263 hDV103S1A0JD37 113 aa6.61□□□□□ -1.35
CDRT1-206ENST00000571263 CASC2Q6XLA1 102 aa6.61□□□□□ -1.35
CDRT1-206ENST00000571263 TMEM254Q8TBM7 123 aa6.61□□□□□ -1.35
CDRT1-206ENST00000571263 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
CDRT1-206ENST00000571263 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
CDRT1-206ENST00000571263 C5orf47Q569G3 176 aa6.6□□□□□ -1.35
CDRT1-206ENST00000571263 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
CDRT1-206ENST00000571263 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
CDRT1-206ENST00000571263 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
CDRT1-206ENST00000571263 A0A087WVE0 104 aa6.57□□□□□ -1.36
CDRT1-206ENST00000571263 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
CDRT1-206ENST00000571263 NOTCH2NLQ7Z3S9 236 aa6.56□□□□□ -1.36
CDRT1-206ENST00000571263 WFDC13Q8IUB5 93 aa6.56□□□□□ -1.36
CDRT1-206ENST00000571263 C9orf92A6NGG3 77 aa6.55□□□□□ -1.36
CDRT1-206ENST00000571263 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
CDRT1-206ENST00000571263 TP53AIP1Q9HCN2 124 aa6.54□□□□□ -1.36
CDRT1-206ENST00000571263 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
CDRT1-206ENST00000571263 SMIM20Q8N5G0 67 aa6.53□□□□□ -1.36
CDRT1-206ENST00000571263 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
CDRT1-206ENST00000571263 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
CDRT1-206ENST00000571263 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
CDRT1-206ENST00000571263 A8MUU9 505 aa6.5□□□□□ -1.37
CDRT1-206ENST00000571263 ATOX1O00244 68 aa6.5□□□□□ -1.37
CDRT1-206ENST00000571263 NDUFS5O43920 106 aa6.5□□□□□ -1.37
CDRT1-206ENST00000571263 Q75L30 129 aa6.5□□□□□ -1.37
CDRT1-206ENST00000571263 XP32Q5T750 250 aa6.49□□□□□ -1.37
CDRT1-206ENST00000571263 UQCRQO14949 82 aa6.47□□□□□ -1.37
CDRT1-206ENST00000571263 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.38
CDRT1-206ENST00000571263 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
CDRT1-206ENST00000571263 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
CDRT1-206ENST00000571263 TRAV7A0A075B6U4 112 aa6.43□□□□□ -1.38
CDRT1-206ENST00000571263 ANAPC13Q9BS18 74 aa6.43□□□□□ -1.38
CDRT1-206ENST00000571263 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
CDRT1-206ENST00000571263 ZCCHC13Q8WW36 166 aaKnown RBP6.41□□□□□ -1.38
CDRT1-206ENST00000571263 SERP2Q8N6R1 65 aa6.4□□□□□ -1.38
CDRT1-206ENST00000571263 TRAV22A0A0B4J277 110 aa6.39□□□□□ -1.39
CDRT1-206ENST00000571263 MP68P56378 58 aa6.39□□□□□ -1.39
CDRT1-206ENST00000571263 H3BPC8 53 aa6.38□□□□□ -1.39
CDRT1-206ENST00000571263 H0Y9P7 68 aa6.35□□□□□ -1.39
CDRT1-206ENST00000571263 Q5W150 140 aa6.34□□□□□ -1.39
CDRT1-206ENST00000571263 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
CDRT1-206ENST00000571263 COX7CP15954 63 aa6.33□□□□□ -1.4
CDRT1-206ENST00000571263 PCOTHQ58A44 107 aa6.32□□□□□ -1.4
CDRT1-206ENST00000571263 HERC1Q15751 4861 aa6.3□□□□□ -1.4
CDRT1-206ENST00000571263 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
CDRT1-206ENST00000571263 RPS28P62857 69 aaKnown RBP6.29□□□□□ -1.4
CDRT1-206ENST00000571263 LINC00208Q96KT6 92 aa6.29□□□□□ -1.4
CDRT1-206ENST00000571263 IGKV2-30P06310 120 aa6.28□□□□□ -1.4
CDRT1-206ENST00000571263 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
CDRT1-206ENST00000571263 SPINK7P58062 85 aa6.26□□□□□ -1.41
CDRT1-206ENST00000571263 IGKV2D-30A0A075B6S6 120 aa6.25□□□□□ -1.41
CDRT1-206ENST00000571263 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
CDRT1-206ENST00000571263 KLKP1Q107X0 134 aa6.25□□□□□ -1.41
CDRT1-206ENST00000571263 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
CDRT1-206ENST00000571263 CYP4F30PQ9H0H9 118 aa6.25□□□□□ -1.41
CDRT1-206ENST00000571263 LPAP08519 4548 aa6.25□□□□□ -1.41
CDRT1-206ENST00000571263 NDUFC1O43677 76 aa6.23□□□□□ -1.41
CDRT1-206ENST00000571263 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
CDRT1-206ENST00000571263 SEC61GP60059 68 aa6.22□□□□□ -1.41
CDRT1-206ENST00000571263 CCDC179H3BU77 68 aa6.2□□□□□ -1.42
CDRT1-206ENST00000571263 SNURFQ9Y675 71 aa6.19□□□□□ -1.42
CDRT1-206ENST00000571263 LRP2P98164 4655 aa6.19□□□□□ -1.42
CDRT1-206ENST00000571263 PRO0628Q9UI54 55 aa6.18□□□□□ -1.42
CDRT1-206ENST00000571263 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
CDRT1-206ENST00000571263 V9GYY9 64 aa6.16□□□□□ -1.42
CDRT1-206ENST00000571263 MUC17Q685J3 4493 aa6.16□□□□□ -1.42
CDRT1-206ENST00000571263 HRES1P13985 223 aa6.13□□□□□ -1.43
CDRT1-206ENST00000571263 SPANXA2-OT1Q8N9U9 137 aa6.12□□□□□ -1.43
CDRT1-206ENST00000571263 A8MUN3 132 aa6.1□□□□□ -1.43
CDRT1-206ENST00000571263 TMEM258P61165 79 aa6.1□□□□□ -1.43
CDRT1-206ENST00000571263 COX6B2Q6YFQ2 88 aa6.1□□□□□ -1.43
CDRT1-206ENST00000571263 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
CDRT1-206ENST00000571263 H7BZZ5 65 aa6.09□□□□□ -1.43
CDRT1-206ENST00000571263 MPLKIPQ8TAP9 179 aa6.09□□□□□ -1.43
CDRT1-206ENST00000571263 C4orf26Q17RF5 130 aa6.08□□□□□ -1.44
CDRT1-206ENST00000571263 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
CDRT1-206ENST00000571263 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
CDRT1-206ENST00000571263 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
CDRT1-206ENST00000571263 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
CDRT1-206ENST00000571263 DMAC1Q96GE9 116 aa6.03□□□□□ -1.44
CDRT1-206ENST00000571263 ACYP2P14621 99 aa6.02□□□□□ -1.45
CDRT1-206ENST00000571263 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
CDRT1-206ENST00000571263 KRTAP3-1Q9BYR8 98 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms