RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 H3BQ85 93 aa7.39□□□□□ -1.23
USB1-210ENST00000565151 TRACP01848 142 aa7.39□□□□□ -1.23
USB1-210ENST00000565151 COX6CP09669 75 aa7.39□□□□□ -1.23
USB1-210ENST00000565151 MPLKIPQ8TAP9 179 aa7.39□□□□□ -1.23
USB1-210ENST00000565151 HRES1P13985 223 aa7.38□□□□□ -1.23
USB1-210ENST00000565151 IGHV6-1A0A0B4J1U7 121 aa7.36□□□□□ -1.23
USB1-210ENST00000565151 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
USB1-210ENST00000565151 TRBV20-1A0A075B6N2 111 aa7.34□□□□□ -1.23
USB1-210ENST00000565151 VPS25Q9BRG1 176 aa7.34□□□□□ -1.23
USB1-210ENST00000565151 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
USB1-210ENST00000565151 MT2AP02795 61 aa7.33□□□□□ -1.24
USB1-210ENST00000565151 RBM3P98179 157 aaKnown RBP7.33□□□□□ -1.24
USB1-210ENST00000565151 BAALC-AS2P0C853 105 aa7.32□□□□□ -1.24
USB1-210ENST00000565151 SCGB1C2P0DMR2 95 aa7.32□□□□□ -1.24
USB1-210ENST00000565151 NAA38Q9BRA0 125 aaKnown RBP7.32□□□□□ -1.24
USB1-210ENST00000565151 MT1FP04733 61 aa7.29□□□□□ -1.24
USB1-210ENST00000565151 DSCR8Q96T75 97 aa7.29□□□□□ -1.24
USB1-210ENST00000565151 Q6ZQT0 140 aa7.28□□□□□ -1.24
USB1-210ENST00000565151 C8orf87E5RJ46 101 aa7.27□□□□□ -1.25
USB1-210ENST00000565151 C9JAW5 83 aa7.26□□□□□ -1.25
USB1-210ENST00000565151 FAM236DA0A1B0GTK5 79 aa7.25□□□□□ -1.25
USB1-210ENST00000565151 FAM236CP0DP71 79 aa7.25□□□□□ -1.25
USB1-210ENST00000565151 ZCCHC13Q8WW36 166 aaKnown RBP7.24□□□□□ -1.25
USB1-210ENST00000565151 Q8N9P0 234 aaPredicted RBP7.23□□□□□ -1.25
USB1-210ENST00000565151 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
USB1-210ENST00000565151 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
USB1-210ENST00000565151 LOC110117498A0A087WWA1 95 aa7.21□□□□□ -1.26
USB1-210ENST00000565151 J3KT08 172 aa7.21□□□□□ -1.26
USB1-210ENST00000565151 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
USB1-210ENST00000565151 IGKV3D-7A0A0C4DH55 119 aa7.2□□□□□ -1.26
USB1-210ENST00000565151 SPINK7P58062 85 aa7.2□□□□□ -1.26
USB1-210ENST00000565151 ATXN8Q156A1 80 aa7.2□□□□□ -1.26
USB1-210ENST00000565151 C8orf17Q9NRJ1 99 aa7.18□□□□□ -1.26
USB1-210ENST00000565151 A8MWP4 228 aa7.17□□□□□ -1.26
USB1-210ENST00000565151 M0R143 59 aa7.17□□□□□ -1.26
USB1-210ENST00000565151 C14orf132Q9NPU4 83 aa7.17□□□□□ -1.26
USB1-210ENST00000565151 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
USB1-210ENST00000565151 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
USB1-210ENST00000565151 C21orf62-AS1Q17RA5 79 aa7.14□□□□□ -1.27
USB1-210ENST00000565151 A0A1B0GW54 56 aa7.12□□□□□ -1.27
USB1-210ENST00000565151 NDUFB1O75438 58 aa7.12□□□□□ -1.27
USB1-210ENST00000565151 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
USB1-210ENST00000565151 SMIM6P0DI80 62 aa7.11□□□□□ -1.27
USB1-210ENST00000565151 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
USB1-210ENST00000565151 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
USB1-210ENST00000565151 MMP24-AS1A0A0U1RRL7 71 aa7.1□□□□□ -1.27
USB1-210ENST00000565151 Q6ZVQ6 151 aa7.1□□□□□ -1.27
USB1-210ENST00000565151 PDE6GP18545 87 aa7.09□□□□□ -1.27
USB1-210ENST00000565151 WFDC13Q8IUB5 93 aa7.09□□□□□ -1.27
USB1-210ENST00000565151 MTURNQ8N3F0 131 aa7.08□□□□□ -1.28
USB1-210ENST00000565151 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
USB1-210ENST00000565151 BATFQ16520 125 aa7.06□□□□□ -1.28
USB1-210ENST00000565151 NREPQ16612 68 aa7.06□□□□□ -1.28
USB1-210ENST00000565151 TAX1BP3O14907 124 aa7.05□□□□□ -1.28
USB1-210ENST00000565151 K7EQZ3 153 aa7.04□□□□□ -1.28
USB1-210ENST00000565151 MRPL34Q9BQ48 92 aaKnown RBP7.04□□□□□ -1.28
USB1-210ENST00000565151 C9orf118A6NHY6 69 aa7.03□□□□□ -1.28
USB1-210ENST00000565151 LYRM7Q5U5X0 104 aa7.03□□□□□ -1.28
USB1-210ENST00000565151 TMEM254Q8TBM7 123 aa7.03□□□□□ -1.28
USB1-210ENST00000565151 LOC105371267A0A1B0GV96 52 aa7.02□□□□□ -1.29
USB1-210ENST00000565151 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
USB1-210ENST00000565151 Q5W150 140 aa7.01□□□□□ -1.29
USB1-210ENST00000565151 A0A1W2PPM0 123 aa7□□□□□ -1.29
USB1-210ENST00000565151 hDV103S1A0JD37 113 aa6.99□□□□□ -1.29
USB1-210ENST00000565151 TSTD3H0UI37 97 aa6.99□□□□□ -1.29
USB1-210ENST00000565151 H3BT86 120 aa6.99□□□□□ -1.29
USB1-210ENST00000565151 Q8N9L7 120 aa6.96□□□□□ -1.3
USB1-210ENST00000565151 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
USB1-210ENST00000565151 KRTAP4-9Q9BYQ8 210 aa6.94□□□□□ -1.3
USB1-210ENST00000565151 BPY2O14599 106 aa6.93□□□□□ -1.3
USB1-210ENST00000565151 NDUFS5O43920 106 aa6.93□□□□□ -1.3
USB1-210ENST00000565151 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
USB1-210ENST00000565151 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.3
USB1-210ENST00000565151 IGKV2-30P06310 120 aa6.9□□□□□ -1.3
USB1-210ENST00000565151 SYNE2Q8WXH0 6885 aaKnown RBP6.9□□□□□ -1.31
USB1-210ENST00000565151 H3BS24 57 aa6.88□□□□□ -1.31
USB1-210ENST00000565151 PRO0461Q9UI25 63 aa6.87□□□□□ -1.31
USB1-210ENST00000565151 SPCS1Q9Y6A9 102 aa6.87□□□□□ -1.31
USB1-210ENST00000565151 HCG22E2RYF7 251 aa6.86□□□□□ -1.31
USB1-210ENST00000565151 CASC2Q6XLA1 102 aa6.86□□□□□ -1.31
USB1-210ENST00000565151 C7orf65Q6ZTY9 151 aa6.85□□□□□ -1.31
USB1-210ENST00000565151 LINC00846Q9NV44 126 aa6.85□□□□□ -1.31
USB1-210ENST00000565151 C4orf26Q17RF5 130 aa6.83□□□□□ -1.32
USB1-210ENST00000565151 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
USB1-210ENST00000565151 KRTAP4-2Q9BYR5 136 aa6.82□□□□□ -1.32
USB1-210ENST00000565151 LCE4AQ5TA78 99 aa6.8□□□□□ -1.32
USB1-210ENST00000565151 CXCL6P80162 114 aa6.77□□□□□ -1.33
USB1-210ENST00000565151 K7EP34 96 aa6.75□□□□□ -1.33
USB1-210ENST00000565151 COL5A1-AS1Q5SY13 56 aa6.74□□□□□ -1.33
USB1-210ENST00000565151 C5orf47Q569G3 176 aa6.73□□□□□ -1.33
USB1-210ENST00000565151 UBL5Q9BZL1 73 aa6.72□□□□□ -1.33
USB1-210ENST00000565151 MT1BP07438 61 aa6.68□□□□□ -1.34
USB1-210ENST00000565151 LCA10Q71F78 164 aa6.67□□□□□ -1.34
USB1-210ENST00000565151 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
USB1-210ENST00000565151 C1orf64Q8NEQ6 169 aa6.66□□□□□ -1.34
USB1-210ENST00000565151 S4R3F8 94 aa6.65□□□□□ -1.34
USB1-210ENST00000565151 KRTAP6-3Q3LI67 103 aa6.63□□□□□ -1.35
USB1-210ENST00000565151 ETDBQ3ZM63 59 aa6.63□□□□□ -1.35
USB1-210ENST00000565151 A0A087WVE0 104 aa6.61□□□□□ -1.35
USB1-210ENST00000565151 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms