RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 TNXBP22105 4242 aa1.14□□□□□ -2.23
CHD9-214ENST00000565119 LYSTQ99698 3801 aa1.14□□□□□ -2.23
CHD9-214ENST00000565119 FAT2Q9NYQ8 4349 aa1.14□□□□□ -2.23
CHD9-214ENST00000565119 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
CHD9-214ENST00000565119 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
CHD9-214ENST00000565119 TMEM167AQ8TBQ9 72 aa1.12□□□□□ -2.23
CHD9-214ENST00000565119 PKD1L1Q8TDX9 2849 aa1.12□□□□□ -2.23
CHD9-214ENST00000565119 SETD2Q9BYW2 2564 aaPredicted RBP1.12□□□□□ -2.23
CHD9-214ENST00000565119 C9orf92A6NGG3 77 aa1.11□□□□□ -2.23
CHD9-214ENST00000565119 FRYQ5TBA9 3013 aa1.11□□□□□ -2.23
CHD9-214ENST00000565119 NF1P21359 2839 aa1.11□□□□□ -2.23
CHD9-214ENST00000565119 DNAH11Q96DT5 4516 aa1.1□□□□□ -2.23
CHD9-214ENST00000565119 SACSQ9NZJ4 4579 aa1.1□□□□□ -2.23
CHD9-214ENST00000565119 DEFB104AQ8WTQ1 72 aa1.1□□□□□ -2.23
CHD9-214ENST00000565119 U3KQA8 63 aa1.1□□□□□ -2.23
CHD9-214ENST00000565119 NBASA2RRP1 2371 aa1.1□□□□□ -2.23
CHD9-214ENST00000565119 ZZEF1O43149 2961 aa1.09□□□□□ -2.23
CHD9-214ENST00000565119 VPS13BQ7Z7G8 4022 aa1.08□□□□□ -2.24
CHD9-214ENST00000565119 MGAQ8IWI9 3026 aa1.08□□□□□ -2.24
CHD9-214ENST00000565119 ACACAQ13085 2346 aa1.08□□□□□ -2.24
CHD9-214ENST00000565119 KMT2AQ03164 3969 aa1.08□□□□□ -2.24
CHD9-214ENST00000565119 DCHS2Q6V1P9 2916 aa1.08□□□□□ -2.24
CHD9-214ENST00000565119 FLNCQ14315 2725 aa1.08□□□□□ -2.24
CHD9-214ENST00000565119 CRYBG3Q68DQ2 2970 aa1.08□□□□□ -2.24
CHD9-214ENST00000565119 MAP1BP46821 2468 aaKnown RBP1.07□□□□□ -2.24
CHD9-214ENST00000565119 TNP1P09430 55 aa1.07□□□□□ -2.24
CHD9-214ENST00000565119 VPS13DQ5THJ4 4388 aa1.07□□□□□ -2.24
CHD9-214ENST00000565119 DMBT1Q9UGM3 2413 aaPredicted RBP1.07□□□□□ -2.24
CHD9-214ENST00000565119 HIVEP3Q5T1R4 2406 aa1.05□□□□□ -2.24
CHD9-214ENST00000565119 TACC2O95359 2948 aa1.05□□□□□ -2.24
CHD9-214ENST00000565119 PRM1P04553 51 aa1.05□□□□□ -2.24
CHD9-214ENST00000565119 NOTCH1P46531 2555 aa1.04□□□□□ -2.24
CHD9-214ENST00000565119 UNC79Q9P2D8 2635 aa1.04□□□□□ -2.24
CHD9-214ENST00000565119 USP24Q9UPU5 2620 aa1.04□□□□□ -2.24
CHD9-214ENST00000565119 HUWE1Q7Z6Z7 4374 aaKnown RBP1.04□□□□□ -2.24
CHD9-214ENST00000565119 SETXQ7Z333 2677 aaKnown RBP1.03□□□□□ -2.24
CHD9-214ENST00000565119 MYCBP2O75592 4640 aa1.03□□□□□ -2.24
CHD9-214ENST00000565119 GCN1Q92616 2671 aaKnown RBP1.03□□□□□ -2.24
CHD9-214ENST00000565119 CCDC168Q8NDH2 2452 aa1.03□□□□□ -2.25
CHD9-214ENST00000565119 SPTBN4Q9H254 2564 aa1.02□□□□□ -2.25
CHD9-214ENST00000565119 COL12A1Q99715 3063 aa1.02□□□□□ -2.25
CHD9-214ENST00000565119 EPG5Q9HCE0 2579 aa1.01□□□□□ -2.25
CHD9-214ENST00000565119 PKD1P98161 4303 aa1.01□□□□□ -2.25
CHD9-214ENST00000565119 PTPN13Q12923 2485 aa1□□□□□ -2.25
CHD9-214ENST00000565119 NSD1Q96L73 2696 aaPredicted RBP1□□□□□ -2.25
CHD9-214ENST00000565119 DMXL1Q9Y485 3027 aa0.99□□□□□ -2.25
CHD9-214ENST00000565119 ACANP16112 2415 aa0.99□□□□□ -2.25
CHD9-214ENST00000565119 H3BNG1 76 aa0.99□□□□□ -2.25
CHD9-214ENST00000565119 RPL39P5Q59GN2 51 aa0.99□□□□□ -2.25
CHD9-214ENST00000565119 APC2O95996 2303 aa0.99□□□□□ -2.25
CHD9-214ENST00000565119 NBPF19A0A087WUL8 3843 aa0.99□□□□□ -2.25
CHD9-214ENST00000565119 ITPR3Q14573 2671 aa0.99□□□□□ -2.25
CHD9-214ENST00000565119 DNAH3Q8TD57 4116 aa0.99□□□□□ -2.25
CHD9-214ENST00000565119 RIF1Q5UIP0 2472 aaKnown RBP0.98□□□□□ -2.25
CHD9-214ENST00000565119 DYNC2H1Q8NCM8 4307 aaKnown RBP0.98□□□□□ -2.25
CHD9-214ENST00000565119 USP9YO00507 2555 aaPredicted RBP0.97□□□□□ -2.25
CHD9-214ENST00000565119 SPENQ96T58 3664 aaKnown RBP0.97□□□□□ -2.25
CHD9-214ENST00000565119 CEP250Q9BV73 2442 aa0.97□□□□□ -2.25
CHD9-214ENST00000565119 DNAH2Q9P225 4427 aa0.97□□□□□ -2.25
CHD9-214ENST00000565119 ZFYVE26Q68DK2 2539 aa0.96□□□□□ -2.26
CHD9-214ENST00000565119 STAB1Q9NY15 2570 aa0.96□□□□□ -2.26
CHD9-214ENST00000565119 COL7A1Q02388 2944 aa0.95□□□□□ -2.26
CHD9-214ENST00000565119 NBEAL2Q6ZNJ1 2754 aa0.95□□□□□ -2.26
CHD9-214ENST00000565119 DNAH8Q96JB1 4490 aa0.95□□□□□ -2.26
CHD9-214ENST00000565119 FAM186AA6NE01 2351 aa0.94□□□□□ -2.26
CHD9-214ENST00000565119 PKHD1L1Q86WI1 4243 aa0.94□□□□□ -2.26
CHD9-214ENST00000565119 MTORP42345 2549 aa0.94□□□□□ -2.26
CHD9-214ENST00000565119 ANK3Q12955 4377 aaKnown RBP0.94□□□□□ -2.26
CHD9-214ENST00000565119 SPART-AS1P0CW21 52 aa0.94□□□□□ -2.26
CHD9-214ENST00000565119 HECTD4Q9Y4D8 3996 aa0.94□□□□□ -2.26
CHD9-214ENST00000565119 FLNBO75369 2602 aaKnown RBP0.94□□□□□ -2.26
CHD9-214ENST00000565119 ZFHX4Q86UP3 3567 aa0.93□□□□□ -2.26
CHD9-214ENST00000565119 RANBP2P49792 3224 aaKnown RBP0.93□□□□□ -2.26
CHD9-214ENST00000565119 HSPG2P98160 4391 aa0.93□□□□□ -2.26
CHD9-214ENST00000565119 ANKRD11Q6UB99 2663 aaPredicted RBP0.92□□□□□ -2.26
CHD9-214ENST00000565119 NBEAQ8NFP9 2946 aa0.92□□□□□ -2.26
CHD9-214ENST00000565119 HIVEP1P15822 2718 aa0.92□□□□□ -2.26
CHD9-214ENST00000565119 KALRNO60229 2985 aa0.92□□□□□ -2.26
CHD9-214ENST00000565119 LRRK2Q5S007 2527 aa0.92□□□□□ -2.26
CHD9-214ENST00000565119 CFAP54Q96N23 3096 aa0.92□□□□□ -2.26
CHD9-214ENST00000565119 CELSR3Q9NYQ7 3312 aa0.91□□□□□ -2.26
CHD9-214ENST00000565119 DEFB108AA8MXU0 73 aa0.91□□□□□ -2.26
CHD9-214ENST00000565119 DEFB110Q30KQ9 67 aa0.91□□□□□ -2.26
CHD9-214ENST00000565119 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
CHD9-214ENST00000565119 KRTAP8-1Q8IUC2 63 aa0.91□□□□□ -2.26
CHD9-214ENST00000565119 DNAH7Q8WXX0 4024 aa0.9□□□□□ -2.26
CHD9-214ENST00000565119 UTP20O75691 2785 aaKnown RBP0.9□□□□□ -2.27
CHD9-214ENST00000565119 H3BUX3 64 aa0.9□□□□□ -2.27
CHD9-214ENST00000565119 SPRR2DP22532 72 aa0.9□□□□□ -2.27
CHD9-214ENST00000565119 WDR87Q6ZQQ6 2873 aa0.9□□□□□ -2.27
CHD9-214ENST00000565119 CUBNO60494 3623 aa0.88□□□□□ -2.27
CHD9-214ENST00000565119 LRP1Q07954 4544 aaKnown RBP0.88□□□□□ -2.27
CHD9-214ENST00000565119 ANKHD1Q8IWZ3 2542 aaKnown RBP0.87□□□□□ -2.27
CHD9-214ENST00000565119 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
CHD9-214ENST00000565119 TENM3Q9P273 2699 aa0.87□□□□□ -2.27
CHD9-214ENST00000565119 SPG11Q96JI7 2443 aa0.86□□□□□ -2.27
CHD9-214ENST00000565119 LAMA5O15230 3695 aa0.86□□□□□ -2.27
CHD9-214ENST00000565119 SPRR2BP35325 72 aa0.86□□□□□ -2.27
CHD9-214ENST00000565119 DMXL2Q8TDJ6 3036 aa0.86□□□□□ -2.27
CHD9-214ENST00000565119 RELNP78509 3460 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms