RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 COX6CP09669 75 aa5.12□□□□□ -1.59
CMTM3-209ENST00000565003 NOTCH2NLQ7Z3S9 236 aa5.12□□□□□ -1.59
CMTM3-209ENST00000565003 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
CMTM3-209ENST00000565003 CCKP06307 115 aa5.11□□□□□ -1.59
CMTM3-209ENST00000565003 LINC00313P59037 77 aa5.11□□□□□ -1.59
CMTM3-209ENST00000565003 DEFB116Q30KQ4 102 aa5.11□□□□□ -1.59
CMTM3-209ENST00000565003 COL5A1-AS1Q5SY13 56 aa5.11□□□□□ -1.59
CMTM3-209ENST00000565003 UQCR10Q9UDW1 63 aa5.11□□□□□ -1.59
CMTM3-209ENST00000565003 TRACP01848 142 aa5.1□□□□□ -1.59
CMTM3-209ENST00000565003 LINC00472Q9H8W2 130 aa5.1□□□□□ -1.59
CMTM3-209ENST00000565003 V9GYY9 64 aa5.1□□□□□ -1.59
CMTM3-209ENST00000565003 TRBV20-1A0A075B6N2 111 aa5.09□□□□□ -1.59
CMTM3-209ENST00000565003 IGHV6-1A0A0B4J1U7 121 aa5.07□□□□□ -1.6
CMTM3-209ENST00000565003 SMIM20Q8N5G0 67 aa5.07□□□□□ -1.6
CMTM3-209ENST00000565003 SCGB1C2P0DMR2 95 aa5.06□□□□□ -1.6
CMTM3-209ENST00000565003 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
CMTM3-209ENST00000565003 RBM3P98179 157 aaKnown RBP5.05□□□□□ -1.6
CMTM3-209ENST00000565003 HRES1P13985 223 aa5.04□□□□□ -1.6
CMTM3-209ENST00000565003 DSCR8Q96T75 97 aa5.04□□□□□ -1.6
CMTM3-209ENST00000565003 A0A1B0GVX0 72 aa5.03□□□□□ -1.6
CMTM3-209ENST00000565003 BAALC-AS2P0C853 105 aa5.03□□□□□ -1.6
CMTM3-209ENST00000565003 MPLKIPQ8TAP9 179 aa5.03□□□□□ -1.6
CMTM3-209ENST00000565003 FAM236DA0A1B0GTK5 79 aa5.02□□□□□ -1.61
CMTM3-209ENST00000565003 C8orf87E5RJ46 101 aa5.02□□□□□ -1.61
CMTM3-209ENST00000565003 FAM236CP0DP71 79 aa5.02□□□□□ -1.61
CMTM3-209ENST00000565003 C9JAW5 83 aa5□□□□□ -1.61
CMTM3-209ENST00000565003 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
CMTM3-209ENST00000565003 NAA38Q9BRA0 125 aaKnown RBP5□□□□□ -1.61
CMTM3-209ENST00000565003 RPS28P62857 69 aaKnown RBP4.99□□□□□ -1.61
CMTM3-209ENST00000565003 Q6ZQT0 140 aa4.99□□□□□ -1.61
CMTM3-209ENST00000565003 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
CMTM3-209ENST00000565003 PRO0628Q9UI54 55 aa4.99□□□□□ -1.61
CMTM3-209ENST00000565003 J3KT08 172 aa4.98□□□□□ -1.61
CMTM3-209ENST00000565003 MT2AP02795 61 aa4.98□□□□□ -1.61
CMTM3-209ENST00000565003 BATFQ16520 125 aa4.98□□□□□ -1.61
CMTM3-209ENST00000565003 ZCCHC13Q8WW36 166 aaKnown RBP4.98□□□□□ -1.61
CMTM3-209ENST00000565003 ATXN8Q156A1 80 aa4.97□□□□□ -1.61
CMTM3-209ENST00000565003 J3QR89 54 aa4.96□□□□□ -1.62
CMTM3-209ENST00000565003 LOC110117498A0A087WWA1 95 aa4.95□□□□□ -1.62
CMTM3-209ENST00000565003 JMJD7-PLA2G4BH0Y9G9 81 aa4.95□□□□□ -1.62
CMTM3-209ENST00000565003 MT1FP04733 61 aa4.95□□□□□ -1.62
CMTM3-209ENST00000565003 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
CMTM3-209ENST00000565003 A8MWP4 228 aa4.94□□□□□ -1.62
CMTM3-209ENST00000565003 NDUFB1O75438 58 aa4.94□□□□□ -1.62
CMTM3-209ENST00000565003 SPINK7P58062 85 aa4.94□□□□□ -1.62
CMTM3-209ENST00000565003 IGKV3D-7A0A0C4DH55 119 aa4.93□□□□□ -1.62
CMTM3-209ENST00000565003 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
CMTM3-209ENST00000565003 C14orf132Q9NPU4 83 aa4.93□□□□□ -1.62
CMTM3-209ENST00000565003 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
CMTM3-209ENST00000565003 A0A1B0GW54 56 aa4.92□□□□□ -1.62
CMTM3-209ENST00000565003 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
CMTM3-209ENST00000565003 GTF2H5Q6ZYL4 71 aa4.92□□□□□ -1.62
CMTM3-209ENST00000565003 USH2AO75445 5202 aa4.92□□□□□ -1.62
CMTM3-209ENST00000565003 PDE6GP18545 87 aa4.91□□□□□ -1.62
CMTM3-209ENST00000565003 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
CMTM3-209ENST00000565003 KRTAP10-10P60014 251 aa4.9□□□□□ -1.63
CMTM3-209ENST00000565003 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
CMTM3-209ENST00000565003 WFDC13Q8IUB5 93 aa4.89□□□□□ -1.63
CMTM3-209ENST00000565003 TAX1BP3O14907 124 aa4.88□□□□□ -1.63
CMTM3-209ENST00000565003 LYRM7Q5U5X0 104 aa4.88□□□□□ -1.63
CMTM3-209ENST00000565003 Q6ZVQ6 151 aa4.88□□□□□ -1.63
CMTM3-209ENST00000565003 PRR15Q8IV56 129 aa4.88□□□□□ -1.63
CMTM3-209ENST00000565003 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
CMTM3-209ENST00000565003 MMP24-AS1A0A0U1RRL7 71 aa4.87□□□□□ -1.63
CMTM3-209ENST00000565003 NREPQ16612 68 aa4.87□□□□□ -1.63
CMTM3-209ENST00000565003 C4orf26Q17RF5 130 aa4.86□□□□□ -1.63
CMTM3-209ENST00000565003 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
CMTM3-209ENST00000565003 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
CMTM3-209ENST00000565003 K7EQZ3 153 aa4.84□□□□□ -1.63
CMTM3-209ENST00000565003 TMEM254Q8TBM7 123 aa4.84□□□□□ -1.63
CMTM3-209ENST00000565003 MRPL34Q9BQ48 92 aaKnown RBP4.84□□□□□ -1.63
CMTM3-209ENST00000565003 C9orf118A6NHY6 69 aa4.83□□□□□ -1.64
CMTM3-209ENST00000565003 H3BT86 120 aa4.83□□□□□ -1.64
CMTM3-209ENST00000565003 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
CMTM3-209ENST00000565003 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
CMTM3-209ENST00000565003 A0A1W2PPM0 123 aa4.81□□□□□ -1.64
CMTM3-209ENST00000565003 NDUFS5O43920 106 aa4.8□□□□□ -1.64
CMTM3-209ENST00000565003 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
CMTM3-209ENST00000565003 BPY2O14599 106 aa4.78□□□□□ -1.64
CMTM3-209ENST00000565003 Q5W150 140 aa4.77□□□□□ -1.65
CMTM3-209ENST00000565003 Q8N9L7 120 aa4.77□□□□□ -1.65
CMTM3-209ENST00000565003 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
CMTM3-209ENST00000565003 K7EP34 96 aa4.76□□□□□ -1.65
CMTM3-209ENST00000565003 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
CMTM3-209ENST00000565003 H1FX-AS1Q4G0G2 97 aa4.76□□□□□ -1.65
CMTM3-209ENST00000565003 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
CMTM3-209ENST00000565003 SPCS1Q9Y6A9 102 aa4.75□□□□□ -1.65
CMTM3-209ENST00000565003 C7orf65Q6ZTY9 151 aa4.74□□□□□ -1.65
CMTM3-209ENST00000565003 H3BS24 57 aa4.73□□□□□ -1.65
CMTM3-209ENST00000565003 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
CMTM3-209ENST00000565003 CASC2Q6XLA1 102 aa4.73□□□□□ -1.65
CMTM3-209ENST00000565003 HCG22E2RYF7 251 aa4.72□□□□□ -1.65
CMTM3-209ENST00000565003 F8W1H4 67 aa4.72□□□□□ -1.65
CMTM3-209ENST00000565003 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
CMTM3-209ENST00000565003 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
CMTM3-209ENST00000565003 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
CMTM3-209ENST00000565003 LINC00846Q9NV44 126 aa4.69□□□□□ -1.66
CMTM3-209ENST00000565003 PRO0461Q9UI25 63 aa4.69□□□□□ -1.66
CMTM3-209ENST00000565003 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
CMTM3-209ENST00000565003 CXCL6P80162 114 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms