RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 VPS25Q9BRG1 176 aa10.2□□□□□ -0.78
HERC2-204ENST00000563945 VAMP8Q9BV40 100 aa10.2□□□□□ -0.78
HERC2-204ENST00000563945 A0A1B0GVX0 72 aa10.19□□□□□ -0.78
HERC2-204ENST00000563945 COX6CP09669 75 aa10.19□□□□□ -0.78
HERC2-204ENST00000563945 SPINK7P58062 85 aa10.18□□□□□ -0.78
HERC2-204ENST00000563945 ZCCHC13Q8WW36 166 aaKnown RBP10.18□□□□□ -0.78
HERC2-204ENST00000563945 MACF1Q9UPN3 7388 aaKnown RBP10.17□□□□□ -0.78
HERC2-204ENST00000563945 FXYD2P54710 66 aa10.17□□□□□ -0.78
HERC2-204ENST00000563945 SYNE2Q8WXH0 6885 aaKnown RBP10.15□□□□□ -0.78
HERC2-204ENST00000563945 UBE2V1Q13404 147 aa10.14□□□□□ -0.79
HERC2-204ENST00000563945 A8MWP4 228 aa10.13□□□□□ -0.79
HERC2-204ENST00000563945 LYRM7Q5U5X0 104 aa10.12□□□□□ -0.79
HERC2-204ENST00000563945 J3KT08 172 aa10.11□□□□□ -0.79
HERC2-204ENST00000563945 KRTAP19-6Q3LI70 58 aa10.11□□□□□ -0.79
HERC2-204ENST00000563945 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
HERC2-204ENST00000563945 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
HERC2-204ENST00000563945 NDUFB1O75438 58 aa10.09□□□□□ -0.79
HERC2-204ENST00000563945 C21orf62-AS1Q17RA5 79 aa10.09□□□□□ -0.79
HERC2-204ENST00000563945 K7ERJ3 54 aa10.05□□□□□ -0.8
HERC2-204ENST00000563945 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
HERC2-204ENST00000563945 HSD52Q0P140 79 aa10.04□□□□□ -0.8
HERC2-204ENST00000563945 SCGB1C2P0DMR2 95 aa10.02□□□□□ -0.81
HERC2-204ENST00000563945 C9JAW5 83 aa10.01□□□□□ -0.81
HERC2-204ENST00000563945 Q8N9P0 234 aaPredicted RBP10.01□□□□□ -0.81
HERC2-204ENST00000563945 Q6ZQT0 140 aa9.97□□□□□ -0.81
HERC2-204ENST00000563945 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
HERC2-204ENST00000563945 BAALC-AS2P0C853 105 aa9.94□□□□□ -0.82
HERC2-204ENST00000563945 KRTAP6-3Q3LI67 103 aa9.9□□□□□ -0.82
HERC2-204ENST00000563945 IGKV3D-7A0A0C4DH55 119 aa9.89□□□□□ -0.83
HERC2-204ENST00000563945 Q6ZVQ6 151 aa9.89□□□□□ -0.83
HERC2-204ENST00000563945 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
HERC2-204ENST00000563945 A0A1B0GW54 56 aa9.85□□□□□ -0.83
HERC2-204ENST00000563945 JMJD7-PLA2G4BH0Y9G9 81 aa9.83□□□□□ -0.84
HERC2-204ENST00000563945 UQCR10Q9UDW1 63 aa9.82□□□□□ -0.84
HERC2-204ENST00000563945 PDE6GP18545 87 aa9.8□□□□□ -0.84
HERC2-204ENST00000563945 PRR15Q8IV56 129 aa9.79□□□□□ -0.84
HERC2-204ENST00000563945 NDUFS5O43920 106 aa9.78□□□□□ -0.84
HERC2-204ENST00000563945 PYY3Q5JQD4 70 aa9.78□□□□□ -0.84
HERC2-204ENST00000563945 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
HERC2-204ENST00000563945 LOC110117498A0A087WWA1 95 aa9.77□□□□□ -0.85
HERC2-204ENST00000563945 NREPQ16612 68 aa9.77□□□□□ -0.85
HERC2-204ENST00000563945 ATXN8Q156A1 80 aa9.76□□□□□ -0.85
HERC2-204ENST00000563945 TMEM254Q8TBM7 123 aa9.76□□□□□ -0.85
HERC2-204ENST00000563945 IGKV2D-30A0A075B6S6 120 aa9.71□□□□□ -0.86
HERC2-204ENST00000563945 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.86
HERC2-204ENST00000563945 IGKV2-30P06310 120 aa9.71□□□□□ -0.86
HERC2-204ENST00000563945 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
HERC2-204ENST00000563945 C14orf132Q9NPU4 83 aa9.7□□□□□ -0.86
HERC2-204ENST00000563945 C7orf65Q6ZTY9 151 aa9.66□□□□□ -0.86
HERC2-204ENST00000563945 NAA38Q9BRA0 125 aaKnown RBP9.62□□□□□ -0.87
HERC2-204ENST00000563945 FAM236AA0A1B0GUQ0 79 aa9.61□□□□□ -0.87
HERC2-204ENST00000563945 FAM236BA0A1B0GV22 79 aa9.61□□□□□ -0.87
HERC2-204ENST00000563945 K7EQZ3 153 aa9.61□□□□□ -0.87
HERC2-204ENST00000563945 A6NN06 94 aa9.6□□□□□ -0.87
HERC2-204ENST00000563945 TMA7Q9Y2S6 64 aaKnown RBP9.6□□□□□ -0.87
HERC2-204ENST00000563945 M0R143 59 aa9.58□□□□□ -0.88
HERC2-204ENST00000563945 NEBP20929 6669 aa9.56□□□□□ -0.88
HERC2-204ENST00000563945 BPY2O14599 106 aa9.55□□□□□ -0.88
HERC2-204ENST00000563945 C4orf26Q17RF5 130 aa9.55□□□□□ -0.88
HERC2-204ENST00000563945 Q5W150 140 aa9.55□□□□□ -0.88
HERC2-204ENST00000563945 C5orf47Q569G3 176 aa9.54□□□□□ -0.88
HERC2-204ENST00000563945 Q5VV11 94 aa9.5□□□□□ -0.89
HERC2-204ENST00000563945 HCG22E2RYF7 251 aa9.49□□□□□ -0.89
HERC2-204ENST00000563945 CASC2Q6XLA1 102 aa9.48□□□□□ -0.89
HERC2-204ENST00000563945 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
HERC2-204ENST00000563945 CXCL6P80162 114 aa9.43□□□□□ -0.9
HERC2-204ENST00000563945 MT1BP07438 61 aa9.42□□□□□ -0.9
HERC2-204ENST00000563945 S4R3F8 94 aa9.42□□□□□ -0.9
HERC2-204ENST00000563945 MUC12Q9UKN1 5478 aa9.41□□□□□ -0.9
HERC2-204ENST00000563945 TSTD3H0UI37 97 aa9.4□□□□□ -0.9
HERC2-204ENST00000563945 Q8N9L7 120 aa9.4□□□□□ -0.9
HERC2-204ENST00000563945 KRTAP20-1Q3LI63 56 aa9.39□□□□□ -0.91
HERC2-204ENST00000563945 LOC105371267A0A1B0GV96 52 aa9.38□□□□□ -0.91
HERC2-204ENST00000563945 H3BT86 120 aa9.38□□□□□ -0.91
HERC2-204ENST00000563945 KRTAP19-8Q3LI54 63 aa9.36□□□□□ -0.91
HERC2-204ENST00000563945 SPRR2GQ9BYE4 73 aa9.36□□□□□ -0.91
HERC2-204ENST00000563945 C1orf64Q8NEQ6 169 aa9.34□□□□□ -0.91
HERC2-204ENST00000563945 KRTAP10-5P60370 271 aa9.33□□□□□ -0.92
HERC2-204ENST00000563945 BATFQ16520 125 aa9.31□□□□□ -0.92
HERC2-204ENST00000563945 KRTAP3-1Q9BYR8 98 aa9.31□□□□□ -0.92
HERC2-204ENST00000563945 LCA10Q71F78 164 aa9.3□□□□□ -0.92
HERC2-204ENST00000563945 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
HERC2-204ENST00000563945 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
HERC2-204ENST00000563945 SMIM6P0DI80 62 aa9.24□□□□□ -0.93
HERC2-204ENST00000563945 C9orf118A6NHY6 69 aa9.22□□□□□ -0.93
HERC2-204ENST00000563945 KRTAP5-9P26371 169 aa9.22□□□□□ -0.93
HERC2-204ENST00000563945 UBL5Q9BZL1 73 aa9.2□□□□□ -0.94
HERC2-204ENST00000563945 A0A1W2PPM0 123 aa9.19□□□□□ -0.94
HERC2-204ENST00000563945 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.94
HERC2-204ENST00000563945 CRIPTQ9P021 101 aa9.15□□□□□ -0.94
HERC2-204ENST00000563945 KMT2DO14686 5537 aa9.15□□□□□ -0.95
HERC2-204ENST00000563945 MDN1Q9NU22 5596 aa9.12□□□□□ -0.95
HERC2-204ENST00000563945 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
HERC2-204ENST00000563945 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
HERC2-204ENST00000563945 SPCS1Q9Y6A9 102 aa9.06□□□□□ -0.96
HERC2-204ENST00000563945 KRTAP2-3P0C7H8 128 aa9.05□□□□□ -0.96
HERC2-204ENST00000563945 KRTAP2-4Q9BYR9 128 aa9.05□□□□□ -0.96
HERC2-204ENST00000563945 SMCPP49901 116 aaPredicted RBP9.02□□□□□ -0.97
HERC2-204ENST00000563945 CYP4F30PQ9H0H9 118 aa8.99□□□□□ -0.97
HERC2-204ENST00000563945 A0A087WVE0 104 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms