RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 DSCR10P59022 87 aa10.26□□□□□ -0.77
RAB40C-207ENST00000563109 A8MWP4 228 aa10.25□□□□□ -0.77
RAB40C-207ENST00000563109 BPY2O14599 106 aa10.25□□□□□ -0.77
RAB40C-207ENST00000563109 LINC00313P59037 77 aa10.25□□□□□ -0.77
RAB40C-207ENST00000563109 C8orf87E5RJ46 101 aa10.24□□□□□ -0.77
RAB40C-207ENST00000563109 ACYP1P07311 99 aa10.23□□□□□ -0.77
RAB40C-207ENST00000563109 UBR4Q5T4S7 5183 aa10.22□□□□□ -0.77
RAB40C-207ENST00000563109 FAM240AA0A1B0GVK7 77 aa10.21□□□□□ -0.77
RAB40C-207ENST00000563109 SEC61BP60468 96 aaKnown RBP10.21□□□□□ -0.77
RAB40C-207ENST00000563109 IGKV3D-7A0A0C4DH55 119 aa10.19□□□□□ -0.78
RAB40C-207ENST00000563109 RPL37P61927 97 aaKnown RBP10.18□□□□□ -0.78
RAB40C-207ENST00000563109 PRR15Q8IV56 129 aa10.17□□□□□ -0.78
RAB40C-207ENST00000563109 J3QR89 54 aa10.15□□□□□ -0.78
RAB40C-207ENST00000563109 K7EQZ3 153 aa10.15□□□□□ -0.78
RAB40C-207ENST00000563109 Q75L30 129 aa10.15□□□□□ -0.78
RAB40C-207ENST00000563109 NOTCH2NLQ7Z3S9 236 aa10.15□□□□□ -0.78
RAB40C-207ENST00000563109 C8orf17Q9NRJ1 99 aa10.14□□□□□ -0.79
RAB40C-207ENST00000563109 MUC17Q685J3 4493 aa10.13□□□□□ -0.79
RAB40C-207ENST00000563109 C20orf166-AS1Q96NR2 134 aa10.13□□□□□ -0.79
RAB40C-207ENST00000563109 KRTAP16-1A8MUX0 517 aa10.12□□□□□ -0.79
RAB40C-207ENST00000563109 A8MUU9 505 aa10.1□□□□□ -0.79
RAB40C-207ENST00000563109 CXCL6P80162 114 aa10.1□□□□□ -0.79
RAB40C-207ENST00000563109 PCOTHQ58A44 107 aa10.09□□□□□ -0.79
RAB40C-207ENST00000563109 Q8N9L7 120 aa10.09□□□□□ -0.79
RAB40C-207ENST00000563109 ATP11AUNQ6ZP68 121 aa10.08□□□□□ -0.8
RAB40C-207ENST00000563109 MMP24-AS1A0A0U1RRL7 71 aa10.07□□□□□ -0.8
RAB40C-207ENST00000563109 RNF213Q63HN8 5207 aa10.06□□□□□ -0.8
RAB40C-207ENST00000563109 ATP5EP2Q5VTU8 51 aa10.05□□□□□ -0.8
RAB40C-207ENST00000563109 hDV103S1A0JD37 113 aa10.03□□□□□ -0.8
RAB40C-207ENST00000563109 K7ERU9 68 aa10.03□□□□□ -0.8
RAB40C-207ENST00000563109 TMEM254Q8TBM7 123 aa10.03□□□□□ -0.8
RAB40C-207ENST00000563109 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
RAB40C-207ENST00000563109 LINC00643Q86TS7 51 aa10□□□□□ -0.81
RAB40C-207ENST00000563109 CASC2Q6XLA1 102 aa9.99□□□□□ -0.81
RAB40C-207ENST00000563109 WFDC13Q8IUB5 93 aa9.99□□□□□ -0.81
RAB40C-207ENST00000563109 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
RAB40C-207ENST00000563109 HCG22E2RYF7 251 aa9.97□□□□□ -0.81
RAB40C-207ENST00000563109 NDUFS5O43920 106 aa9.95□□□□□ -0.82
RAB40C-207ENST00000563109 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
RAB40C-207ENST00000563109 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
RAB40C-207ENST00000563109 ZCCHC13Q8WW36 166 aaKnown RBP9.91□□□□□ -0.82
RAB40C-207ENST00000563109 A0A0U1RQV1 116 aa9.88□□□□□ -0.83
RAB40C-207ENST00000563109 MUC2Q02817 5179 aa9.84□□□□□ -0.83
RAB40C-207ENST00000563109 A0A087WVE0 104 aa9.78□□□□□ -0.84
RAB40C-207ENST00000563109 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
RAB40C-207ENST00000563109 SPINK7P58062 85 aa9.71□□□□□ -0.86
RAB40C-207ENST00000563109 Q5W150 140 aa9.71□□□□□ -0.86
RAB40C-207ENST00000563109 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
RAB40C-207ENST00000563109 IMUPQ9GZP8 106 aa9.69□□□□□ -0.86
RAB40C-207ENST00000563109 COX6B2Q6YFQ2 88 aa9.66□□□□□ -0.86
RAB40C-207ENST00000563109 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.86
RAB40C-207ENST00000563109 IGKV2-30P06310 120 aa9.65□□□□□ -0.86
RAB40C-207ENST00000563109 C7orf65Q6ZTY9 151 aa9.65□□□□□ -0.86
RAB40C-207ENST00000563109 HRES1P13985 223 aa9.63□□□□□ -0.87
RAB40C-207ENST00000563109 RBM12B-AS1Q9P1G2 102 aa9.63□□□□□ -0.87
RAB40C-207ENST00000563109 UQCRQO14949 82 aa9.62□□□□□ -0.87
RAB40C-207ENST00000563109 TRAV22A0A0B4J277 110 aa9.61□□□□□ -0.87
RAB40C-207ENST00000563109 SCGB1A1P11684 91 aa9.6□□□□□ -0.87
RAB40C-207ENST00000563109 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
RAB40C-207ENST00000563109 FAM236DA0A1B0GTK5 79 aa9.59□□□□□ -0.87
RAB40C-207ENST00000563109 FAM236CP0DP71 79 aa9.59□□□□□ -0.87
RAB40C-207ENST00000563109 FAT4Q6V0I7 4981 aa9.57□□□□□ -0.88
RAB40C-207ENST00000563109 MPLKIPQ8TAP9 179 aa9.56□□□□□ -0.88
RAB40C-207ENST00000563109 LCE2CQ5TA81 110 aa9.55□□□□□ -0.88
RAB40C-207ENST00000563109 H0Y9P7 68 aa9.54□□□□□ -0.88
RAB40C-207ENST00000563109 ATOX1O00244 68 aa9.54□□□□□ -0.88
RAB40C-207ENST00000563109 OCR1Q9BZK8 76 aa9.54□□□□□ -0.88
RAB40C-207ENST00000563109 FAM236AA0A1B0GUQ0 79 aa9.52□□□□□ -0.89
RAB40C-207ENST00000563109 FAM236BA0A1B0GV22 79 aa9.52□□□□□ -0.89
RAB40C-207ENST00000563109 LOC101927531A0A1B0GV80 90 aa9.51□□□□□ -0.89
RAB40C-207ENST00000563109 MP68P56378 58 aa9.48□□□□□ -0.89
RAB40C-207ENST00000563109 SMIM20Q8N5G0 67 aa9.46□□□□□ -0.9
RAB40C-207ENST00000563109 C5orf47Q569G3 176 aa9.45□□□□□ -0.9
RAB40C-207ENST00000563109 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
RAB40C-207ENST00000563109 MT1HP80294 61 aa9.44□□□□□ -0.9
RAB40C-207ENST00000563109 CYP4F30PQ9H0H9 118 aa9.44□□□□□ -0.9
RAB40C-207ENST00000563109 C1orf64Q8NEQ6 169 aa9.43□□□□□ -0.9
RAB40C-207ENST00000563109 LINC00208Q96KT6 92 aa9.41□□□□□ -0.9
RAB40C-207ENST00000563109 C4orf26Q17RF5 130 aa9.4□□□□□ -0.9
RAB40C-207ENST00000563109 TRAV7A0A075B6U4 112 aa9.39□□□□□ -0.91
RAB40C-207ENST00000563109 H3BPC8 53 aa9.39□□□□□ -0.91
RAB40C-207ENST00000563109 M0R2T5 61 aa9.39□□□□□ -0.91
RAB40C-207ENST00000563109 FLGP20930 4061 aaPredicted RBP9.36□□□□□ -0.91
RAB40C-207ENST00000563109 PCP4P48539 62 aa9.34□□□□□ -0.91
RAB40C-207ENST00000563109 H1FX-AS1Q4G0G2 97 aa9.32□□□□□ -0.92
RAB40C-207ENST00000563109 KLKP1Q107X0 134 aa9.25□□□□□ -0.93
RAB40C-207ENST00000563109 SERP2Q8N6R1 65 aa9.25□□□□□ -0.93
RAB40C-207ENST00000563109 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
RAB40C-207ENST00000563109 KRTAP3-1Q9BYR8 98 aa9.21□□□□□ -0.94
RAB40C-207ENST00000563109 KRTAP10-6P60371 365 aaPredicted RBP9.19□□□□□ -0.94
RAB40C-207ENST00000563109 S4R3F8 94 aa9.16□□□□□ -0.94
RAB40C-207ENST00000563109 A8MUN3 132 aa9.15□□□□□ -0.94
RAB40C-207ENST00000563109 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
RAB40C-207ENST00000563109 C20orf197Q8N268 126 aa9.14□□□□□ -0.95
RAB40C-207ENST00000563109 SNURFQ9Y675 71 aa9.14□□□□□ -0.95
RAB40C-207ENST00000563109 COX7CP15954 63 aa9.1□□□□□ -0.95
RAB40C-207ENST00000563109 CCDC179H3BU77 68 aa9.07□□□□□ -0.96
RAB40C-207ENST00000563109 LCA10Q71F78 164 aa9.06□□□□□ -0.96
RAB40C-207ENST00000563109 DMAC1Q96GE9 116 aa9.04□□□□□ -0.96
RAB40C-207ENST00000563109 CSAG1Q6PB30 78 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms