RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SCGB1A1P11684 91 aa5.86□□□□□ -1.47
USP3-219ENST00000561326 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
USP3-219ENST00000561326 A0A087WVE0 104 aa5.84□□□□□ -1.47
USP3-219ENST00000561326 IGHV6-1A0A0B4J1U7 121 aa5.84□□□□□ -1.47
USP3-219ENST00000561326 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
USP3-219ENST00000561326 TNXBP22105 4242 aa5.82□□□□□ -1.48
USP3-219ENST00000561326 FAM236AA0A1B0GUQ0 79 aa5.82□□□□□ -1.48
USP3-219ENST00000561326 FAM236BA0A1B0GV22 79 aa5.82□□□□□ -1.48
USP3-219ENST00000561326 HCG22E2RYF7 251 aa5.82□□□□□ -1.48
USP3-219ENST00000561326 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
USP3-219ENST00000561326 J3QL48 77 aa5.82□□□□□ -1.48
USP3-219ENST00000561326 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
USP3-219ENST00000561326 LINC00313P59037 77 aa5.81□□□□□ -1.48
USP3-219ENST00000561326 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
USP3-219ENST00000561326 C8orf17Q9NRJ1 99 aa5.8□□□□□ -1.48
USP3-219ENST00000561326 hDV103S1A0JD37 113 aa5.79□□□□□ -1.48
USP3-219ENST00000561326 ATOX1O00244 68 aa5.79□□□□□ -1.48
USP3-219ENST00000561326 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
USP3-219ENST00000561326 WFDC13Q8IUB5 93 aa5.79□□□□□ -1.48
USP3-219ENST00000561326 SMIM20Q8N5G0 67 aa5.78□□□□□ -1.48
USP3-219ENST00000561326 RETNLBQ9BQ08 111 aa5.78□□□□□ -1.48
USP3-219ENST00000561326 MMP24-AS1A0A0U1RRL7 71 aa5.77□□□□□ -1.49
USP3-219ENST00000561326 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
USP3-219ENST00000561326 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
USP3-219ENST00000561326 NOTCH2NLQ7Z3S9 236 aa5.74□□□□□ -1.49
USP3-219ENST00000561326 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
USP3-219ENST00000561326 IGLV7-46A0A075B6I9 117 aa5.73□□□□□ -1.49
USP3-219ENST00000561326 ANAPC13Q9BS18 74 aa5.73□□□□□ -1.49
USP3-219ENST00000561326 TRAV7A0A075B6U4 112 aa5.72□□□□□ -1.49
USP3-219ENST00000561326 NDUFS5O43920 106 aa5.72□□□□□ -1.49
USP3-219ENST00000561326 PRR4Q16378 134 aa5.72□□□□□ -1.49
USP3-219ENST00000561326 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
USP3-219ENST00000561326 SERP2Q8N6R1 65 aa5.71□□□□□ -1.5
USP3-219ENST00000561326 C9orf92A6NGG3 77 aa5.69□□□□□ -1.5
USP3-219ENST00000561326 UQCRQO14949 82 aa5.69□□□□□ -1.5
USP3-219ENST00000561326 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
USP3-219ENST00000561326 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
USP3-219ENST00000561326 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
USP3-219ENST00000561326 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
USP3-219ENST00000561326 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
USP3-219ENST00000561326 COX7CP15954 63 aa5.65□□□□□ -1.5
USP3-219ENST00000561326 PCP4P48539 62 aa5.65□□□□□ -1.5
USP3-219ENST00000561326 MP68P56378 58 aa5.64□□□□□ -1.51
USP3-219ENST00000561326 KRTAP13-3Q3SY46 172 aa5.64□□□□□ -1.51
USP3-219ENST00000561326 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
USP3-219ENST00000561326 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
USP3-219ENST00000561326 TRAV22A0A0B4J277 110 aa5.62□□□□□ -1.51
USP3-219ENST00000561326 A8MUU9 505 aa5.62□□□□□ -1.51
USP3-219ENST00000561326 H0Y9P7 68 aa5.61□□□□□ -1.51
USP3-219ENST00000561326 Q75L30 129 aa5.61□□□□□ -1.51
USP3-219ENST00000561326 H3BPC8 53 aa5.6□□□□□ -1.51
USP3-219ENST00000561326 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
USP3-219ENST00000561326 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
USP3-219ENST00000561326 ZCCHC13Q8WW36 166 aaKnown RBP5.58□□□□□ -1.52
USP3-219ENST00000561326 XP32Q5T750 250 aa5.57□□□□□ -1.52
USP3-219ENST00000561326 LINC00208Q96KT6 92 aa5.57□□□□□ -1.52
USP3-219ENST00000561326 Q5W150 140 aa5.56□□□□□ -1.52
USP3-219ENST00000561326 C1orf64Q8NEQ6 169 aa5.56□□□□□ -1.52
USP3-219ENST00000561326 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
USP3-219ENST00000561326 RPL37P61927 97 aaKnown RBP5.55□□□□□ -1.52
USP3-219ENST00000561326 A0A0U1RQV1 116 aa5.54□□□□□ -1.52
USP3-219ENST00000561326 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
USP3-219ENST00000561326 KLKP1Q107X0 134 aa5.54□□□□□ -1.52
USP3-219ENST00000561326 NDUFC1O43677 76 aa5.53□□□□□ -1.52
USP3-219ENST00000561326 SNURFQ9Y675 71 aa5.53□□□□□ -1.52
USP3-219ENST00000561326 HERC1Q15751 4861 aa5.53□□□□□ -1.52
USP3-219ENST00000561326 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
USP3-219ENST00000561326 SEC61BP60468 96 aaKnown RBP5.49□□□□□ -1.53
USP3-219ENST00000561326 CYP4F30PQ9H0H9 118 aa5.49□□□□□ -1.53
USP3-219ENST00000561326 IGKV2D-30A0A075B6S6 120 aa5.48□□□□□ -1.53
USP3-219ENST00000561326 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
USP3-219ENST00000561326 SPINK7P58062 85 aa5.45□□□□□ -1.54
USP3-219ENST00000561326 PCOTHQ58A44 107 aa5.45□□□□□ -1.54
USP3-219ENST00000561326 H7BZZ5 65 aa5.44□□□□□ -1.54
USP3-219ENST00000561326 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
USP3-219ENST00000561326 TMEM258P61165 79 aa5.4□□□□□ -1.54
USP3-219ENST00000561326 SPANXA2-OT1Q8N9U9 137 aa5.4□□□□□ -1.54
USP3-219ENST00000561326 LPAP08519 4548 aa5.4□□□□□ -1.55
USP3-219ENST00000561326 UBR4Q5T4S7 5183 aa5.39□□□□□ -1.55
USP3-219ENST00000561326 HRES1P13985 223 aa5.38□□□□□ -1.55
USP3-219ENST00000561326 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
USP3-219ENST00000561326 LRP2P98164 4655 aa5.37□□□□□ -1.55
USP3-219ENST00000561326 FAM236DA0A1B0GTK5 79 aa5.35□□□□□ -1.55
USP3-219ENST00000561326 FAM236CP0DP71 79 aa5.35□□□□□ -1.55
USP3-219ENST00000561326 C4orf26Q17RF5 130 aa5.33□□□□□ -1.56
USP3-219ENST00000561326 A8MUN3 132 aa5.31□□□□□ -1.56
USP3-219ENST00000561326 ACYP2P14621 99 aa5.31□□□□□ -1.56
USP3-219ENST00000561326 RBM12B-AS1Q9P1G2 102 aa5.31□□□□□ -1.56
USP3-219ENST00000561326 COX6B2Q6YFQ2 88 aa5.3□□□□□ -1.56
USP3-219ENST00000561326 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
USP3-219ENST00000561326 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
USP3-219ENST00000561326 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
USP3-219ENST00000561326 SERP1Q9Y6X1 66 aa5.25□□□□□ -1.57
USP3-219ENST00000561326 MPLKIPQ8TAP9 179 aa5.24□□□□□ -1.57
USP3-219ENST00000561326 LCE2BO14633 110 aa5.23□□□□□ -1.57
USP3-219ENST00000561326 KRTAP4-1Q9BYQ7 146 aa5.23□□□□□ -1.57
USP3-219ENST00000561326 CHKB-CPT1BH3BT56 60 aa5.22□□□□□ -1.57
USP3-219ENST00000561326 RPS28P62857 69 aaKnown RBP5.22□□□□□ -1.57
USP3-219ENST00000561326 H1FX-AS1Q4G0G2 97 aa5.21□□□□□ -1.58
USP3-219ENST00000561326 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms