RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	DCHS2	Q6V1P9	2916 aa		5.41	□□□□□ -1.54
NEO1-208	ENST00000560328	LCA10	Q71F78	164 aa		5.4	□□□□□ -1.54
NEO1-208	ENST00000560328	KRTAP13-1	Q8IUC0	172 aa		5.39	□□□□□ -1.55
NEO1-208	ENST00000560328	KRTAP21-3	Q3LHN1	58 aa		5.39	□□□□□ -1.55
NEO1-208	ENST00000560328		Q5VV11	94 aa		5.38	□□□□□ -1.55
NEO1-208	ENST00000560328	DMAC1	Q96GE9	116 aa		5.38	□□□□□ -1.55
NEO1-208	ENST00000560328	CAMK2N1	Q7Z7J9	78 aa		5.38	□□□□□ -1.55
NEO1-208	ENST00000560328	ASB16-AS1	Q495Z4	193 aa		5.37	□□□□□ -1.55
NEO1-208	ENST00000560328	OXT	P01178	125 aa		5.36	□□□□□ -1.55
NEO1-208	ENST00000560328	KRTAP13-2	Q52LG2	175 aa		5.35	□□□□□ -1.55
NEO1-208	ENST00000560328	FBN2	P35556	2912 aa		5.35	□□□□□ -1.55
NEO1-208	ENST00000560328	NF1	P21359	2839 aa		5.34	□□□□□ -1.56
NEO1-208	ENST00000560328	RPS29	P62273	56 aa	Known RBP	5.33	□□□□□ -1.56
NEO1-208	ENST00000560328	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.32	□□□□□ -1.56
NEO1-208	ENST00000560328		R4GN34	69 aa		5.32	□□□□□ -1.56
NEO1-208	ENST00000560328	RELN	P78509	3460 aa		5.3	□□□□□ -1.56
NEO1-208	ENST00000560328	FLG2	Q5D862	2391 aa	Predicted RBP	5.26	□□□□□ -1.57
NEO1-208	ENST00000560328	H1FX-AS1	Q4G0G2	97 aa		5.26	□□□□□ -1.57
NEO1-208	ENST00000560328	WDFY3	Q8IZQ1	3526 aa		5.25	□□□□□ -1.57
NEO1-208	ENST00000560328	PRAC1	Q96KF2	57 aa		5.24	□□□□□ -1.57
NEO1-208	ENST00000560328	MXRA5	Q9NR99	2828 aa		5.24	□□□□□ -1.57
NEO1-208	ENST00000560328	RPL37	P61927	97 aa	Known RBP	5.23	□□□□□ -1.57
NEO1-208	ENST00000560328		M0QZ58	72 aa		5.23	□□□□□ -1.57
NEO1-208	ENST00000560328	LAMA5	O15230	3695 aa		5.23	□□□□□ -1.57
NEO1-208	ENST00000560328	ADM2	Q7Z4H4	148 aa		5.23	□□□□□ -1.57
NEO1-208	ENST00000560328	SPATA8	Q6RVD6	105 aa		5.21	□□□□□ -1.58
NEO1-208	ENST00000560328	DCHS1	Q96JQ0	3298 aa		5.19	□□□□□ -1.58
NEO1-208	ENST00000560328	ASPM	Q8IZT6	3477 aa		5.19	□□□□□ -1.58
NEO1-208	ENST00000560328	DMD	P11532	3685 aa		5.17	□□□□□ -1.58
NEO1-208	ENST00000560328	ZFHX4	Q86UP3	3567 aa		5.17	□□□□□ -1.58
NEO1-208	ENST00000560328	LUZP6	Q538Z0	58 aa		5.17	□□□□□ -1.58
NEO1-208	ENST00000560328	ROMO1	P60602	79 aa		5.16	□□□□□ -1.58
NEO1-208	ENST00000560328	CELSR1	Q9NYQ6	3014 aa		5.15	□□□□□ -1.58
NEO1-208	ENST00000560328	MUC3A	Q02505	3323 aa		5.15	□□□□□ -1.59
NEO1-208	ENST00000560328	KRTAP1-4	P0C5Y4	121 aa		5.15	□□□□□ -1.59
NEO1-208	ENST00000560328	PDZD2	O15018	2839 aa		5.12	□□□□□ -1.59
NEO1-208	ENST00000560328		A8MUU9	505 aa		5.12	□□□□□ -1.59
NEO1-208	ENST00000560328	C20orf166-AS1	Q96NR2	134 aa		5.1	□□□□□ -1.59
NEO1-208	ENST00000560328	TENM3	Q9P273	2699 aa		5.1	□□□□□ -1.59
NEO1-208	ENST00000560328	PLAC4	Q8WY50	150 aa		5.08	□□□□□ -1.6
NEO1-208	ENST00000560328	TENM1	Q9UKZ4	2725 aa		5.08	□□□□□ -1.6
NEO1-208	ENST00000560328	TENM2	Q9NT68	2774 aa		5.08	□□□□□ -1.6
NEO1-208	ENST00000560328		A8MU10	97 aa		5.07	□□□□□ -1.6
NEO1-208	ENST00000560328	NBPF19	A0A087WUL8	3843 aa		5.03	□□□□□ -1.6
NEO1-208	ENST00000560328	XP32	Q5T750	250 aa		5.02	□□□□□ -1.61
NEO1-208	ENST00000560328	OTOG	Q6ZRI0	2925 aa		5.01	□□□□□ -1.61
NEO1-208	ENST00000560328	SMG1	Q96Q15	3661 aa	Known RBP	5	□□□□□ -1.61
NEO1-208	ENST00000560328	PKD1L1	Q8TDX9	2849 aa		4.99	□□□□□ -1.61
NEO1-208	ENST00000560328	CSMD1	Q96PZ7	3565 aa		4.99	□□□□□ -1.61
NEO1-208	ENST00000560328		A6NN06	94 aa		4.98	□□□□□ -1.61
NEO1-208	ENST00000560328	KRTAP16-1	A8MUX0	517 aa		4.96	□□□□□ -1.62
NEO1-208	ENST00000560328	FBN1	P35555	2871 aa	Known RBP	4.95	□□□□□ -1.62
NEO1-208	ENST00000560328		A0A1B0GVY2	172 aa		4.93	□□□□□ -1.62
NEO1-208	ENST00000560328	TPRXL	Q17RH7	258 aa		4.92	□□□□□ -1.62
NEO1-208	ENST00000560328	VWF	P04275	2813 aa		4.92	□□□□□ -1.62
NEO1-208	ENST00000560328	TG	P01266	2768 aa		4.92	□□□□□ -1.62
NEO1-208	ENST00000560328	ZFHX3	Q15911	3703 aa		4.91	□□□□□ -1.62
NEO1-208	ENST00000560328	KRTAP25-1	Q3LHN0	102 aa		4.91	□□□□□ -1.62
NEO1-208	ENST00000560328	SVEP1	Q4LDE5	3571 aa		4.89	□□□□□ -1.63
NEO1-208	ENST00000560328	KRTAP13-3	Q3SY46	172 aa		4.89	□□□□□ -1.63
NEO1-208	ENST00000560328	ANK3	Q12955	4377 aa	Known RBP	4.87	□□□□□ -1.63
NEO1-208	ENST00000560328	KRTAP10-8	P60410	259 aa		4.86	□□□□□ -1.63
NEO1-208	ENST00000560328	SPEN	Q96T58	3664 aa	Known RBP	4.85	□□□□□ -1.63
NEO1-208	ENST00000560328	CSMD2	Q7Z408	3487 aa		4.85	□□□□□ -1.63
NEO1-208	ENST00000560328		A0A0A0MQY5	61 aa		4.83	□□□□□ -1.64
NEO1-208	ENST00000560328	TNP1	P09430	55 aa		4.81	□□□□□ -1.64
NEO1-208	ENST00000560328		H3BS24	57 aa		4.81	□□□□□ -1.64
NEO1-208	ENST00000560328		H0YAA0	97 aa		4.79	□□□□□ -1.64
NEO1-208	ENST00000560328	BSN	Q9UPA5	3926 aa		4.78	□□□□□ -1.64
NEO1-208	ENST00000560328	CUBN	O60494	3623 aa		4.74	□□□□□ -1.65
NEO1-208	ENST00000560328	TRRAP	Q9Y4A5	3859 aa		4.74	□□□□□ -1.65
NEO1-208	ENST00000560328		P0C880	135 aa		4.73	□□□□□ -1.65
NEO1-208	ENST00000560328	KRTAP10-10	P60014	251 aa		4.71	□□□□□ -1.66
NEO1-208	ENST00000560328	C10orf95	Q9H7T3	257 aa		4.69	□□□□□ -1.66
NEO1-208	ENST00000560328	FBN3	Q75N90	2809 aa		4.66	□□□□□ -1.66
NEO1-208	ENST00000560328	PP632	Q6XCG6	107 aa		4.65	□□□□□ -1.66
NEO1-208	ENST00000560328	SRRM2	Q9UQ35	2752 aa	Known RBP	4.64	□□□□□ -1.67
NEO1-208	ENST00000560328	NDUFAF8	A1L188	74 aa		4.63	□□□□□ -1.67
NEO1-208	ENST00000560328	MEGF8	Q7Z7M0	2845 aa		4.61	□□□□□ -1.67
NEO1-208	ENST00000560328	KRTAP3-1	Q9BYR8	98 aa		4.59	□□□□□ -1.67
NEO1-208	ENST00000560328	PRO2289	Q9P1D8	64 aa		4.55	□□□□□ -1.68
NEO1-208	ENST00000560328	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.55	□□□□□ -1.68
NEO1-208	ENST00000560328	VPS13C	Q709C8	3753 aa		4.55	□□□□□ -1.68
NEO1-208	ENST00000560328	KRTAP12-2	P59991	146 aa		4.53	□□□□□ -1.68
NEO1-208	ENST00000560328	COL7A1	Q02388	2944 aa		4.51	□□□□□ -1.69
NEO1-208	ENST00000560328	MT1HL1	P0DM35	61 aa		4.51	□□□□□ -1.69
NEO1-208	ENST00000560328	KRTAP12-1	P59990	96 aa		4.46	□□□□□ -1.7
NEO1-208	ENST00000560328	KRTAP10-4	P60372	401 aa	Predicted RBP	4.46	□□□□□ -1.7
NEO1-208	ENST00000560328	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.43	□□□□□ -1.7
NEO1-208	ENST00000560328	KRTAP4-5	Q9BYR2	181 aa		4.41	□□□□□ -1.7
NEO1-208	ENST00000560328	KRTAP10-6	P60371	365 aa	Predicted RBP	4.41	□□□□□ -1.7
NEO1-208	ENST00000560328	KRTAP13-4	Q3LI77	160 aa		4.4	□□□□□ -1.7
NEO1-208	ENST00000560328	AKAP9	Q99996	3911 aa		4.39	□□□□□ -1.71
NEO1-208	ENST00000560328	DNAH9	Q9NYC9	4486 aa		4.35	□□□□□ -1.71
NEO1-208	ENST00000560328	ALMS1	Q8TCU4	4167 aa		4.34	□□□□□ -1.72
NEO1-208	ENST00000560328	KRTAP3-3	Q9BYR6	98 aa		4.31	□□□□□ -1.72
NEO1-208	ENST00000560328	CSMD3	Q7Z407	3707 aa		4.3	□□□□□ -1.72
NEO1-208	ENST00000560328	KRTAP3-2	Q9BYR7	98 aa		4.28	□□□□□ -1.72
NEO1-208	ENST00000560328	DNAH5	Q8TE73	4624 aa		4.23	□□□□□ -1.73
NEO1-208	ENST00000560328	DNAH1	Q9P2D7	4330 aa		4.22	□□□□□ -1.73

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