RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
CLPX-204ENST00000559152 Q5XG85 94 aa6.61□□□□□ -1.35
CLPX-204ENST00000559152 MRPL34Q9BQ48 92 aaKnown RBP6.61□□□□□ -1.35
CLPX-204ENST00000559152 C1orf64Q8NEQ6 169 aa6.6□□□□□ -1.35
CLPX-204ENST00000559152 A0A087X002 238 aa6.6□□□□□ -1.35
CLPX-204ENST00000559152 SPINK6Q6UWN8 80 aa6.6□□□□□ -1.35
CLPX-204ENST00000559152 PKHD1P08F94 4074 aa6.59□□□□□ -1.35
CLPX-204ENST00000559152 C8orf87E5RJ46 101 aa6.59□□□□□ -1.35
CLPX-204ENST00000559152 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
CLPX-204ENST00000559152 CYP4F30PQ9H0H9 118 aa6.58□□□□□ -1.36
CLPX-204ENST00000559152 NDUFS5O43920 106 aa6.58□□□□□ -1.36
CLPX-204ENST00000559152 KRTAP13-2Q52LG2 175 aa6.58□□□□□ -1.36
CLPX-204ENST00000559152 LIMD2Q9BT23 127 aa6.57□□□□□ -1.36
CLPX-204ENST00000559152 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
CLPX-204ENST00000559152 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
CLPX-204ENST00000559152 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
CLPX-204ENST00000559152 C4orf48Q5BLP8 95 aa6.54□□□□□ -1.36
CLPX-204ENST00000559152 NOTCH2NLQ7Z3S9 236 aa6.53□□□□□ -1.36
CLPX-204ENST00000559152 TYMSOSQ8TAI1 123 aa6.52□□□□□ -1.37
CLPX-204ENST00000559152 LINC00313P59037 77 aa6.52□□□□□ -1.37
CLPX-204ENST00000559152 C1orf195Q5TG92 126 aa6.52□□□□□ -1.37
CLPX-204ENST00000559152 SPINK1P00995 79 aa6.51□□□□□ -1.37
CLPX-204ENST00000559152 FP248Q71RG6 208 aaPredicted RBP6.51□□□□□ -1.37
CLPX-204ENST00000559152 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
CLPX-204ENST00000559152 C4orf26Q17RF5 130 aa6.5□□□□□ -1.37
CLPX-204ENST00000559152 PRR4Q16378 134 aa6.49□□□□□ -1.37
CLPX-204ENST00000559152 IGLV7-46A0A075B6I9 117 aa6.48□□□□□ -1.37
CLPX-204ENST00000559152 LOC101927531A0A1B0GV80 90 aa6.48□□□□□ -1.37
CLPX-204ENST00000559152 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
CLPX-204ENST00000559152 SPAG11AQ6PDA7 123 aa6.48□□□□□ -1.37
CLPX-204ENST00000559152 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.38
CLPX-204ENST00000559152 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
CLPX-204ENST00000559152 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
CLPX-204ENST00000559152 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
CLPX-204ENST00000559152 LINC00304Q8N9R0 145 aa6.44□□□□□ -1.38
CLPX-204ENST00000559152 EPPK1P58107 5090 aaKnown RBP6.43□□□□□ -1.38
CLPX-204ENST00000559152 SVIPQ8NHG7 77 aa6.43□□□□□ -1.38
CLPX-204ENST00000559152 KRTAP13-3Q3SY46 172 aa6.42□□□□□ -1.38
CLPX-204ENST00000559152 MPLKIPQ8TAP9 179 aa6.42□□□□□ -1.38
CLPX-204ENST00000559152 SMR3BP02814 79 aaPredicted RBP6.42□□□□□ -1.38
CLPX-204ENST00000559152 Q1T7F1 81 aa6.42□□□□□ -1.38
CLPX-204ENST00000559152 DYNC1H1Q14204 4646 aaKnown RBP6.42□□□□□ -1.38
CLPX-204ENST00000559152 Q5W150 140 aa6.41□□□□□ -1.38
CLPX-204ENST00000559152 PRR26Q8N8Z3 221 aa6.41□□□□□ -1.38
CLPX-204ENST00000559152 V9GYY9 64 aa6.41□□□□□ -1.38
CLPX-204ENST00000559152 KRTAP16-1A8MUX0 517 aa6.38□□□□□ -1.39
CLPX-204ENST00000559152 COA5Q86WW8 74 aa6.37□□□□□ -1.39
CLPX-204ENST00000559152 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
CLPX-204ENST00000559152 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.4
CLPX-204ENST00000559152 IGKV2-30P06310 120 aa6.33□□□□□ -1.4
CLPX-204ENST00000559152 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
CLPX-204ENST00000559152 ACYP2P14621 99 aa6.3□□□□□ -1.4
CLPX-204ENST00000559152 HRES1P13985 223 aa6.29□□□□□ -1.4
CLPX-204ENST00000559152 RETNLBQ9BQ08 111 aa6.29□□□□□ -1.4
CLPX-204ENST00000559152 FAT1Q14517 4588 aa6.29□□□□□ -1.4
CLPX-204ENST00000559152 PRO0628Q9UI54 55 aa6.27□□□□□ -1.41
CLPX-204ENST00000559152 DMAC1Q96GE9 116 aa6.26□□□□□ -1.41
CLPX-204ENST00000559152 PSPHP1O15172 72 aa6.26□□□□□ -1.41
CLPX-204ENST00000559152 HSPG2P98160 4391 aa6.24□□□□□ -1.41
CLPX-204ENST00000559152 IGKV2D-30A0A075B6S6 120 aa6.24□□□□□ -1.41
CLPX-204ENST00000559152 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
CLPX-204ENST00000559152 A8MUN3 132 aa6.23□□□□□ -1.41
CLPX-204ENST00000559152 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
CLPX-204ENST00000559152 RYR1P21817 5038 aa6.22□□□□□ -1.41
CLPX-204ENST00000559152 CHKB-CPT1BH3BT56 60 aa6.21□□□□□ -1.42
CLPX-204ENST00000559152 C7orf65Q6ZTY9 151 aa6.21□□□□□ -1.42
CLPX-204ENST00000559152 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
CLPX-204ENST00000559152 PRR15LQ9BU68 103 aa6.21□□□□□ -1.42
CLPX-204ENST00000559152 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
CLPX-204ENST00000559152 A8MUU9 505 aa6.2□□□□□ -1.42
CLPX-204ENST00000559152 Q5VSD8 79 aa6.19□□□□□ -1.42
CLPX-204ENST00000559152 Q5VV11 94 aa6.19□□□□□ -1.42
CLPX-204ENST00000559152 BIRC6Q9NR09 4857 aa6.19□□□□□ -1.42
CLPX-204ENST00000559152 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
CLPX-204ENST00000559152 Q75L30 129 aa6.17□□□□□ -1.42
CLPX-204ENST00000559152 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
CLPX-204ENST00000559152 KRTAP17-1Q9BYP8 105 aa6.16□□□□□ -1.42
CLPX-204ENST00000559152 Q8N1X5 172 aa6.14□□□□□ -1.43
CLPX-204ENST00000559152 FLG2Q5D862 2391 aaPredicted RBP6.11□□□□□ -1.43
CLPX-204ENST00000559152 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
CLPX-204ENST00000559152 A6NED7 52 aa6.09□□□□□ -1.43
CLPX-204ENST00000559152 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
CLPX-204ENST00000559152 SPINK7P58062 85 aa6.06□□□□□ -1.44
CLPX-204ENST00000559152 ABCA13Q86UQ4 5058 aa6.05□□□□□ -1.44
CLPX-204ENST00000559152 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
CLPX-204ENST00000559152 A0A1B0GU69 56 aa6.05□□□□□ -1.44
CLPX-204ENST00000559152 LCE2DQ5TA82 110 aaPredicted RBP6.05□□□□□ -1.44
CLPX-204ENST00000559152 SPTSSBQ8NFR3 76 aa6.05□□□□□ -1.44
CLPX-204ENST00000559152 TNXBP22105 4242 aa6.04□□□□□ -1.44
CLPX-204ENST00000559152 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
CLPX-204ENST00000559152 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
CLPX-204ENST00000559152 HERC2O95714 4834 aa6.02□□□□□ -1.45
CLPX-204ENST00000559152 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
CLPX-204ENST00000559152 LCA10Q71F78 164 aa5.99□□□□□ -1.45
CLPX-204ENST00000559152 RPL37P61927 97 aaKnown RBP5.99□□□□□ -1.45
CLPX-204ENST00000559152 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
CLPX-204ENST00000559152 MT1HL1P0DM35 61 aa5.97□□□□□ -1.45
CLPX-204ENST00000559152 SEC61GP60059 68 aa5.96□□□□□ -1.46
CLPX-204ENST00000559152 COX6B2Q6YFQ2 88 aa5.96□□□□□ -1.46
CLPX-204ENST00000559152 XP32Q5T750 250 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms