RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 EYSQ5T1H1 3165 aa7.64□□□□□ -1.19
SPG11-210ENST00000558319 STAB2Q8WWQ8 2551 aa7.62□□□□□ -1.19
SPG11-210ENST00000558319 FRYLO94915 3013 aa7.6□□□□□ -1.19
SPG11-210ENST00000558319 ASPMQ8IZT6 3477 aa7.59□□□□□ -1.19
SPG11-210ENST00000558319 ASH1LQ9NR48 2969 aaKnown RBP7.59□□□□□ -1.19
SPG11-210ENST00000558319 ATMQ13315 3056 aa7.58□□□□□ -1.2
SPG11-210ENST00000558319 WDFY3Q8IZQ1 3526 aa7.57□□□□□ -1.2
SPG11-210ENST00000558319 NOTCH1P46531 2555 aa7.57□□□□□ -1.2
SPG11-210ENST00000558319 RPS29P62273 56 aaKnown RBP7.57□□□□□ -1.2
SPG11-210ENST00000558319 TACC2O95359 2948 aa7.56□□□□□ -1.2
SPG11-210ENST00000558319 KRTAP13-1Q8IUC0 172 aa7.55□□□□□ -1.2
SPG11-210ENST00000558319 BAHCC1Q9P281 2608 aa7.55□□□□□ -1.2
SPG11-210ENST00000558319 H0YAA0 97 aa7.54□□□□□ -1.2
SPG11-210ENST00000558319 P0C880 135 aa7.49□□□□□ -1.21
SPG11-210ENST00000558319 ZNF292O60281 2723 aa7.49□□□□□ -1.21
SPG11-210ENST00000558319 ITPR2Q14571 2701 aa7.47□□□□□ -1.21
SPG11-210ENST00000558319 DCHS1Q96JQ0 3298 aa7.47□□□□□ -1.21
SPG11-210ENST00000558319 ADGRG4Q8IZF6 3080 aa7.46□□□□□ -1.22
SPG11-210ENST00000558319 APCP25054 2843 aa7.45□□□□□ -1.22
SPG11-210ENST00000558319 COL12A1Q99715 3063 aa7.45□□□□□ -1.22
SPG11-210ENST00000558319 HIVEP1P15822 2718 aa7.44□□□□□ -1.22
SPG11-210ENST00000558319 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
SPG11-210ENST00000558319 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
SPG11-210ENST00000558319 UBR5O95071 2799 aaPredicted RBP7.41□□□□□ -1.22
SPG11-210ENST00000558319 LOC400499M0QZD8 3231 aa7.41□□□□□ -1.22
SPG11-210ENST00000558319 NSD1Q96L73 2696 aaPredicted RBP7.4□□□□□ -1.22
SPG11-210ENST00000558319 KMT2BQ9UMN6 2715 aaPredicted RBP7.39□□□□□ -1.23
SPG11-210ENST00000558319 XP32Q5T750 250 aa7.38□□□□□ -1.23
SPG11-210ENST00000558319 UTP20O75691 2785 aaKnown RBP7.37□□□□□ -1.23
SPG11-210ENST00000558319 IGSF10Q6WRI0 2623 aa7.35□□□□□ -1.23
SPG11-210ENST00000558319 NBEAQ8NFP9 2946 aa7.35□□□□□ -1.23
SPG11-210ENST00000558319 ZZEF1O43149 2961 aa7.32□□□□□ -1.24
SPG11-210ENST00000558319 ZFHX4Q86UP3 3567 aa7.3□□□□□ -1.24
SPG11-210ENST00000558319 ITPR1Q14643 2758 aa7.27□□□□□ -1.24
SPG11-210ENST00000558319 CSMD1Q96PZ7 3565 aa7.26□□□□□ -1.25
SPG11-210ENST00000558319 LAMA5O15230 3695 aa7.25□□□□□ -1.25
SPG11-210ENST00000558319 NBPF19A0A087WUL8 3843 aa7.24□□□□□ -1.25
SPG11-210ENST00000558319 KRTAP1-4P0C5Y4 121 aa7.22□□□□□ -1.25
SPG11-210ENST00000558319 RELNP78509 3460 aa7.19□□□□□ -1.26
SPG11-210ENST00000558319 TNRC18O15417 2968 aaPredicted RBP7.18□□□□□ -1.26
SPG11-210ENST00000558319 CELSR2Q9HCU4 2923 aa7.18□□□□□ -1.26
SPG11-210ENST00000558319 DMXL1Q9Y485 3027 aa7.15□□□□□ -1.27
SPG11-210ENST00000558319 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
SPG11-210ENST00000558319 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
SPG11-210ENST00000558319 DCHS2Q6V1P9 2916 aa7.04□□□□□ -1.28
SPG11-210ENST00000558319 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
SPG11-210ENST00000558319 TENM4Q6N022 2769 aa7□□□□□ -1.29
SPG11-210ENST00000558319 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
SPG11-210ENST00000558319 CELSR1Q9NYQ6 3014 aa6.98□□□□□ -1.29
SPG11-210ENST00000558319 TENM2Q9NT68 2774 aa6.93□□□□□ -1.3
SPG11-210ENST00000558319 KRTAP21-3Q3LHN1 58 aa6.93□□□□□ -1.3
SPG11-210ENST00000558319 SMG1Q96Q15 3661 aaKnown RBP6.91□□□□□ -1.3
SPG11-210ENST00000558319 DMDP11532 3685 aa6.91□□□□□ -1.3
SPG11-210ENST00000558319 FLNCQ14315 2725 aa6.9□□□□□ -1.31
SPG11-210ENST00000558319 CUBNO60494 3623 aa6.9□□□□□ -1.31
SPG11-210ENST00000558319 FBN2P35556 2912 aa6.89□□□□□ -1.31
SPG11-210ENST00000558319 SVEP1Q4LDE5 3571 aa6.89□□□□□ -1.31
SPG11-210ENST00000558319 SPENQ96T58 3664 aaKnown RBP6.89□□□□□ -1.31
SPG11-210ENST00000558319 TENM1Q9UKZ4 2725 aa6.88□□□□□ -1.31
SPG11-210ENST00000558319 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
SPG11-210ENST00000558319 KRTAP13-4Q3LI77 160 aa6.85□□□□□ -1.31
SPG11-210ENST00000558319 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
SPG11-210ENST00000558319 ZANQ9Y493 2812 aa6.8□□□□□ -1.32
SPG11-210ENST00000558319 NF1P21359 2839 aa6.79□□□□□ -1.32
SPG11-210ENST00000558319 HRNRQ86YZ3 2850 aaPredicted RBP6.78□□□□□ -1.32
SPG11-210ENST00000558319 TGP01266 2768 aa6.78□□□□□ -1.32
SPG11-210ENST00000558319 ZFHX3Q15911 3703 aa6.74□□□□□ -1.33
SPG11-210ENST00000558319 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
SPG11-210ENST00000558319 VWFP04275 2813 aa6.73□□□□□ -1.33
SPG11-210ENST00000558319 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
SPG11-210ENST00000558319 NIPBLQ6KC79 2804 aaeCLIP6.71□□□□□ -1.34
SPG11-210ENST00000558319 CSMD2Q7Z408 3487 aa6.69□□□□□ -1.34
SPG11-210ENST00000558319 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
SPG11-210ENST00000558319 TENM3Q9P273 2699 aa6.59□□□□□ -1.35
SPG11-210ENST00000558319 MXRA5Q9NR99 2828 aa6.56□□□□□ -1.36
SPG11-210ENST00000558319 MUC3AQ02505 3323 aa6.51□□□□□ -1.37
SPG11-210ENST00000558319 PDZD2O15018 2839 aa6.5□□□□□ -1.37
SPG11-210ENST00000558319 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
SPG11-210ENST00000558319 INE1O15225 51 aa6.49□□□□□ -1.37
SPG11-210ENST00000558319 ANK3Q12955 4377 aaKnown RBP6.42□□□□□ -1.38
SPG11-210ENST00000558319 CSMD3Q7Z407 3707 aa6.39□□□□□ -1.39
SPG11-210ENST00000558319 TRRAPQ9Y4A5 3859 aa6.37□□□□□ -1.39
SPG11-210ENST00000558319 VPS13CQ709C8 3753 aa6.37□□□□□ -1.39
SPG11-210ENST00000558319 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
SPG11-210ENST00000558319 BSNQ9UPA5 3926 aa6.25□□□□□ -1.41
SPG11-210ENST00000558319 FBN1P35555 2871 aaKnown RBP6.25□□□□□ -1.41
SPG11-210ENST00000558319 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
SPG11-210ENST00000558319 HUWE1Q7Z6Z7 4374 aaKnown RBP6.22□□□□□ -1.41
SPG11-210ENST00000558319 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
SPG11-210ENST00000558319 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
SPG11-210ENST00000558319 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
SPG11-210ENST00000558319 MEGF8Q7Z7M0 2845 aa6.16□□□□□ -1.42
SPG11-210ENST00000558319 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
SPG11-210ENST00000558319 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
SPG11-210ENST00000558319 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
SPG11-210ENST00000558319 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
SPG11-210ENST00000558319 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
SPG11-210ENST00000558319 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
SPG11-210ENST00000558319 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
SPG11-210ENST00000558319 AKAP9Q99996 3911 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms