RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 PRR15Q8IV56 129 aa6.45□□□□□ -1.38
RORA-207ENST00000558234 C1orf195Q5TG92 126 aa6.44□□□□□ -1.38
RORA-207ENST00000558234 J3KT08 172 aa6.44□□□□□ -1.38
RORA-207ENST00000558234 J3QL48 77 aa6.44□□□□□ -1.38
RORA-207ENST00000558234 DEFB116Q30KQ4 102 aa6.44□□□□□ -1.38
RORA-207ENST00000558234 MMP24-AS1A0A0U1RRL7 71 aa6.43□□□□□ -1.38
RORA-207ENST00000558234 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
RORA-207ENST00000558234 SS18L2Q9UHA2 77 aa6.43□□□□□ -1.38
RORA-207ENST00000558234 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
RORA-207ENST00000558234 PCP4P48539 62 aa6.42□□□□□ -1.38
RORA-207ENST00000558234 DMBT1Q9UGM3 2413 aaPredicted RBP6.41□□□□□ -1.38
RORA-207ENST00000558234 LRP2P98164 4655 aa6.41□□□□□ -1.38
RORA-207ENST00000558234 KRTAP16-1A8MUX0 517 aa6.4□□□□□ -1.38
RORA-207ENST00000558234 NOTCH2NLQ7Z3S9 236 aa6.4□□□□□ -1.39
RORA-207ENST00000558234 UBR4Q5T4S7 5183 aa6.39□□□□□ -1.39
RORA-207ENST00000558234 A0A1B0GVX0 72 aa6.38□□□□□ -1.39
RORA-207ENST00000558234 ATOX1O00244 68 aa6.38□□□□□ -1.39
RORA-207ENST00000558234 FP248Q71RG6 208 aaPredicted RBP6.37□□□□□ -1.39
RORA-207ENST00000558234 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
RORA-207ENST00000558234 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
RORA-207ENST00000558234 TPRXLQ17RH7 258 aa6.34□□□□□ -1.39
RORA-207ENST00000558234 LIMD2Q9BT23 127 aa6.34□□□□□ -1.39
RORA-207ENST00000558234 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.39
RORA-207ENST00000558234 COX7CP15954 63 aa6.33□□□□□ -1.4
RORA-207ENST00000558234 SERP2Q8N6R1 65 aa6.33□□□□□ -1.4
RORA-207ENST00000558234 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
RORA-207ENST00000558234 CYSTM1Q9H1C7 97 aa6.32□□□□□ -1.4
RORA-207ENST00000558234 TRAV7A0A075B6U4 112 aa6.32□□□□□ -1.4
RORA-207ENST00000558234 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
RORA-207ENST00000558234 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
RORA-207ENST00000558234 RNF213Q63HN8 5207 aa6.3□□□□□ -1.4
RORA-207ENST00000558234 SMIM20Q8N5G0 67 aa6.3□□□□□ -1.4
RORA-207ENST00000558234 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
RORA-207ENST00000558234 RETNLBQ9BQ08 111 aa6.3□□□□□ -1.4
RORA-207ENST00000558234 UQCRQO14949 82 aa6.29□□□□□ -1.4
RORA-207ENST00000558234 TMEM254Q8TBM7 123 aa6.29□□□□□ -1.4
RORA-207ENST00000558234 C4orf48Q5BLP8 95 aa6.28□□□□□ -1.4
RORA-207ENST00000558234 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
RORA-207ENST00000558234 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
RORA-207ENST00000558234 CASC2Q6XLA1 102 aa6.27□□□□□ -1.41
RORA-207ENST00000558234 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
RORA-207ENST00000558234 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
RORA-207ENST00000558234 XP32Q5T750 250 aa6.25□□□□□ -1.41
RORA-207ENST00000558234 IGHV6-1A0A0B4J1U7 121 aa6.24□□□□□ -1.41
RORA-207ENST00000558234 NDUFB1O75438 58 aa6.24□□□□□ -1.41
RORA-207ENST00000558234 MRPL34Q9BQ48 92 aaKnown RBP6.24□□□□□ -1.41
RORA-207ENST00000558234 WFDC13Q8IUB5 93 aa6.23□□□□□ -1.41
RORA-207ENST00000558234 IGLV7-46A0A075B6I9 117 aa6.22□□□□□ -1.41
RORA-207ENST00000558234 LINC00313P59037 77 aa6.2□□□□□ -1.42
RORA-207ENST00000558234 C20orf166-AS1Q96NR2 134 aa6.2□□□□□ -1.42
RORA-207ENST00000558234 Q5W150 140 aa6.2□□□□□ -1.42
RORA-207ENST00000558234 A8MUU9 505 aa6.19□□□□□ -1.42
RORA-207ENST00000558234 MUC2Q02817 5179 aa6.19□□□□□ -1.42
RORA-207ENST00000558234 C5orf47Q569G3 176 aa6.18□□□□□ -1.42
RORA-207ENST00000558234 TP53AIP1Q9HCN2 124 aa6.18□□□□□ -1.42
RORA-207ENST00000558234 H7BZZ5 65 aa6.18□□□□□ -1.42
RORA-207ENST00000558234 PRR4Q16378 134 aa6.17□□□□□ -1.42
RORA-207ENST00000558234 H3BPC8 53 aa6.14□□□□□ -1.43
RORA-207ENST00000558234 C20orf197Q8N268 126 aa6.12□□□□□ -1.43
RORA-207ENST00000558234 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
RORA-207ENST00000558234 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
RORA-207ENST00000558234 Q75L30 129 aa6.11□□□□□ -1.43
RORA-207ENST00000558234 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
RORA-207ENST00000558234 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
RORA-207ENST00000558234 H0Y9P7 68 aa6.09□□□□□ -1.43
RORA-207ENST00000558234 FLGP20930 4061 aaPredicted RBP6.07□□□□□ -1.44
RORA-207ENST00000558234 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
RORA-207ENST00000558234 NDUFC1O43677 76 aa6.06□□□□□ -1.44
RORA-207ENST00000558234 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
RORA-207ENST00000558234 KRTAP19-2Q3LHN2 52 aa6.06□□□□□ -1.44
RORA-207ENST00000558234 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
RORA-207ENST00000558234 TMEM258P61165 79 aa6.05□□□□□ -1.44
RORA-207ENST00000558234 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
RORA-207ENST00000558234 C1orf64Q8NEQ6 169 aa6.03□□□□□ -1.44
RORA-207ENST00000558234 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
RORA-207ENST00000558234 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
RORA-207ENST00000558234 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
RORA-207ENST00000558234 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
RORA-207ENST00000558234 MP68P56378 58 aa6□□□□□ -1.45
RORA-207ENST00000558234 NDUFS5O43920 106 aa5.97□□□□□ -1.45
RORA-207ENST00000558234 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
RORA-207ENST00000558234 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
RORA-207ENST00000558234 PCOTHQ58A44 107 aa5.95□□□□□ -1.46
RORA-207ENST00000558234 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
RORA-207ENST00000558234 MPLKIPQ8TAP9 179 aa5.94□□□□□ -1.46
RORA-207ENST00000558234 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
RORA-207ENST00000558234 FAM236DA0A1B0GTK5 79 aa5.92□□□□□ -1.46
RORA-207ENST00000558234 FAM236CP0DP71 79 aa5.92□□□□□ -1.46
RORA-207ENST00000558234 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
RORA-207ENST00000558234 HRES1P13985 223 aa5.9□□□□□ -1.46
RORA-207ENST00000558234 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
RORA-207ENST00000558234 DMAC1Q96GE9 116 aa5.88□□□□□ -1.47
RORA-207ENST00000558234 C7orf65Q6ZTY9 151 aa5.87□□□□□ -1.47
RORA-207ENST00000558234 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
RORA-207ENST00000558234 IGKV2D-30A0A075B6S6 120 aa5.85□□□□□ -1.47
RORA-207ENST00000558234 SPINK7P58062 85 aa5.84□□□□□ -1.47
RORA-207ENST00000558234 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
RORA-207ENST00000558234 MT1HP80294 61 aa5.76□□□□□ -1.49
RORA-207ENST00000558234 A8MUN3 132 aa5.75□□□□□ -1.49
RORA-207ENST00000558234 COA5Q86WW8 74 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms