RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 IGHV6-1A0A0B4J1U7 121 aa13.72□□□□□ -0.21
SMAD6-202ENST00000557916 LINC00313P59037 77 aa13.72□□□□□ -0.21
SMAD6-202ENST00000557916 A0A1B0GVX0 72 aa13.69□□□□□ -0.22
SMAD6-202ENST00000557916 ETDBQ3ZM63 59 aa13.68□□□□□ -0.22
SMAD6-202ENST00000557916 Q75L30 129 aa13.67□□□□□ -0.22
SMAD6-202ENST00000557916 NOTCH2NLQ7Z3S9 236 aa13.66□□□□□ -0.22
SMAD6-202ENST00000557916 NDUFB1O75438 58 aa13.65□□□□□ -0.22
SMAD6-202ENST00000557916 KRTAP4-1Q9BYQ7 146 aa13.64□□□□□ -0.23
SMAD6-202ENST00000557916 C20orf166-AS1Q96NR2 134 aa13.64□□□□□ -0.23
SMAD6-202ENST00000557916 A8MWP4 228 aa13.62□□□□□ -0.23
SMAD6-202ENST00000557916 C8orf87E5RJ46 101 aa13.62□□□□□ -0.23
SMAD6-202ENST00000557916 A8MUU9 505 aa13.61□□□□□ -0.23
SMAD6-202ENST00000557916 A0A1B0GV90 55 aa13.6□□□□□ -0.23
SMAD6-202ENST00000557916 KRTAP16-1A8MUX0 517 aa13.6□□□□□ -0.23
SMAD6-202ENST00000557916 ATP11AUNQ6ZP68 121 aa13.59□□□□□ -0.23
SMAD6-202ENST00000557916 IGKV3D-7A0A0C4DH55 119 aa13.57□□□□□ -0.24
SMAD6-202ENST00000557916 Q6ZVQ6 151 aa13.57□□□□□ -0.24
SMAD6-202ENST00000557916 LINC00846Q9NV44 126 aa13.55□□□□□ -0.24
SMAD6-202ENST00000557916 A0A0U1RQV1 116 aa13.54□□□□□ -0.24
SMAD6-202ENST00000557916 BPY2O14599 106 aa13.54□□□□□ -0.24
SMAD6-202ENST00000557916 PRR15Q8IV56 129 aa13.53□□□□□ -0.24
SMAD6-202ENST00000557916 UBL5Q9BZL1 73 aa13.51□□□□□ -0.25
SMAD6-202ENST00000557916 C8orf17Q9NRJ1 99 aa13.51□□□□□ -0.25
SMAD6-202ENST00000557916 K7EQZ3 153 aa13.46□□□□□ -0.26
SMAD6-202ENST00000557916 FAT4Q6V0I7 4981 aa13.43□□□□□ -0.26
SMAD6-202ENST00000557916 MMP24-AS1A0A0U1RRL7 71 aa13.39□□□□□ -0.27
SMAD6-202ENST00000557916 Q8N9L7 120 aa13.38□□□□□ -0.27
SMAD6-202ENST00000557916 Q8N9P0 234 aaPredicted RBP13.37□□□□□ -0.27
SMAD6-202ENST00000557916 ACYP1P07311 99 aa13.33□□□□□ -0.28
SMAD6-202ENST00000557916 TMEM254Q8TBM7 123 aa13.33□□□□□ -0.28
SMAD6-202ENST00000557916 hDV103S1A0JD37 113 aa13.32□□□□□ -0.28
SMAD6-202ENST00000557916 MRPL34Q9BQ48 92 aaKnown RBP13.3□□□□□ -0.28
SMAD6-202ENST00000557916 FAM240AA0A1B0GVK7 77 aa13.3□□□□□ -0.28
SMAD6-202ENST00000557916 ZCCHC13Q8WW36 166 aaKnown RBP13.27□□□□□ -0.29
SMAD6-202ENST00000557916 CXCL6P80162 114 aa13.25□□□□□ -0.29
SMAD6-202ENST00000557916 WFDC13Q8IUB5 93 aa13.25□□□□□ -0.29
SMAD6-202ENST00000557916 KRTAP19-2Q3LHN2 52 aa13.23□□□□□ -0.29
SMAD6-202ENST00000557916 CASC2Q6XLA1 102 aa13.22□□□□□ -0.29
SMAD6-202ENST00000557916 NDUFS5O43920 106 aa13.2□□□□□ -0.3
SMAD6-202ENST00000557916 LCE2CQ5TA81 110 aa13.18□□□□□ -0.3
SMAD6-202ENST00000557916 LCE2AQ5TA79 106 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-202ENST00000557916 HCG22E2RYF7 251 aa13.16□□□□□ -0.3
SMAD6-202ENST00000557916 COX6B2Q6YFQ2 88 aa13.13□□□□□ -0.31
SMAD6-202ENST00000557916 ATP5EP2Q5VTU8 51 aa13.1□□□□□ -0.31
SMAD6-202ENST00000557916 J3QR89 54 aa13.08□□□□□ -0.32
SMAD6-202ENST00000557916 SPINK7P58062 85 aa13.06□□□□□ -0.32
SMAD6-202ENST00000557916 LINC00643Q86TS7 51 aa13.05□□□□□ -0.32
SMAD6-202ENST00000557916 HRES1P13985 223 aa13.03□□□□□ -0.32
SMAD6-202ENST00000557916 Q5W150 140 aa13□□□□□ -0.33
SMAD6-202ENST00000557916 MT1HP80294 61 aa12.99□□□□□ -0.33
SMAD6-202ENST00000557916 HIST1H4AP62805 103 aaKnown RBP12.97□□□□□ -0.33
SMAD6-202ENST00000557916 MPLKIPQ8TAP9 179 aa12.96□□□□□ -0.33
SMAD6-202ENST00000557916 RBM12B-AS1Q9P1G2 102 aa12.95□□□□□ -0.34
SMAD6-202ENST00000557916 FAM236DA0A1B0GTK5 79 aa12.9□□□□□ -0.34
SMAD6-202ENST00000557916 FAM236CP0DP71 79 aa12.9□□□□□ -0.34
SMAD6-202ENST00000557916 TP53AIP1Q9HCN2 124 aa12.9□□□□□ -0.34
SMAD6-202ENST00000557916 FLGP20930 4061 aaPredicted RBP12.9□□□□□ -0.34
SMAD6-202ENST00000557916 IGKV2D-30A0A075B6S6 120 aa12.88□□□□□ -0.35
SMAD6-202ENST00000557916 IGKV2-30P06310 120 aa12.88□□□□□ -0.35
SMAD6-202ENST00000557916 A0A087WVE0 104 aa12.84□□□□□ -0.35
SMAD6-202ENST00000557916 C7orf65Q6ZTY9 151 aa12.84□□□□□ -0.35
SMAD6-202ENST00000557916 M0R2T5 61 aa12.83□□□□□ -0.36
SMAD6-202ENST00000557916 K7ERU9 68 aa12.81□□□□□ -0.36
SMAD6-202ENST00000557916 TRAV22A0A0B4J277 110 aa12.67□□□□□ -0.38
SMAD6-202ENST00000557916 KRTAP10-6P60371 365 aaPredicted RBP12.67□□□□□ -0.38
SMAD6-202ENST00000557916 UQCRQO14949 82 aa12.66□□□□□ -0.38
SMAD6-202ENST00000557916 LORP23490 312 aaPredicted RBP12.62□□□□□ -0.39
SMAD6-202ENST00000557916 C4orf26Q17RF5 130 aa12.6□□□□□ -0.39
SMAD6-202ENST00000557916 MT-ATP8P03928 68 aa12.59□□□□□ -0.39
SMAD6-202ENST00000557916 H0Y9P7 68 aa12.56□□□□□ -0.4
SMAD6-202ENST00000557916 IMUPQ9GZP8 106 aa12.56□□□□□ -0.4
SMAD6-202ENST00000557916 CYP4F30PQ9H0H9 118 aa12.55□□□□□ -0.4
SMAD6-202ENST00000557916 LOC101927531A0A1B0GV80 90 aa12.54□□□□□ -0.4
SMAD6-202ENST00000557916 H1FX-AS1Q4G0G2 97 aa12.54□□□□□ -0.4
SMAD6-202ENST00000557916 OCR1Q9BZK8 76 aa12.54□□□□□ -0.4
SMAD6-202ENST00000557916 ATOX1O00244 68 aa12.54□□□□□ -0.4
SMAD6-202ENST00000557916 SCGB1A1P11684 91 aa12.5□□□□□ -0.41
SMAD6-202ENST00000557916 C1orf64Q8NEQ6 169 aa12.43□□□□□ -0.42
SMAD6-202ENST00000557916 MP68P56378 58 aa12.42□□□□□ -0.42
SMAD6-202ENST00000557916 LINC00208Q96KT6 92 aa12.41□□□□□ -0.42
SMAD6-202ENST00000557916 C5orf47Q569G3 176 aa12.4□□□□□ -0.42
SMAD6-202ENST00000557916 KRTAP3-1Q9BYR8 98 aa12.4□□□□□ -0.42
SMAD6-202ENST00000557916 KRTAP9-2Q9BYQ4 174 aa12.38□□□□□ -0.43
SMAD6-202ENST00000557916 KRTAP9-8Q9BYQ0 159 aa12.37□□□□□ -0.43
SMAD6-202ENST00000557916 FAM236AA0A1B0GUQ0 79 aa12.35□□□□□ -0.43
SMAD6-202ENST00000557916 FAM236BA0A1B0GV22 79 aa12.35□□□□□ -0.43
SMAD6-202ENST00000557916 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
SMAD6-202ENST00000557916 H3BPC8 53 aa12.29□□□□□ -0.44
SMAD6-202ENST00000557916 SMIM20Q8N5G0 67 aa12.27□□□□□ -0.45
SMAD6-202ENST00000557916 KLKP1Q107X0 134 aa12.26□□□□□ -0.45
SMAD6-202ENST00000557916 MT2AP02795 61 aa12.25□□□□□ -0.45
SMAD6-202ENST00000557916 S4R3F8 94 aa12.23□□□□□ -0.45
SMAD6-202ENST00000557916 TRAV7A0A075B6U4 112 aa12.22□□□□□ -0.45
SMAD6-202ENST00000557916 MT1FP04733 61 aa12.15□□□□□ -0.46
SMAD6-202ENST00000557916 LCA10Q71F78 164 aa12.15□□□□□ -0.46
SMAD6-202ENST00000557916 KRTAP10-10P60014 251 aa12.13□□□□□ -0.47
SMAD6-202ENST00000557916 A8MUN3 132 aa12.09□□□□□ -0.47
SMAD6-202ENST00000557916 CSAG1Q6PB30 78 aa12.08□□□□□ -0.48
SMAD6-202ENST00000557916 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
SMAD6-202ENST00000557916 SERP2Q8N6R1 65 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms