RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 UBL5Q9BZL1 73 aa8.28□□□□□ -1.08
NEDD1-213ENST00000557644 A8MWP4 228 aa8.28□□□□□ -1.08
NEDD1-213ENST00000557644 IGKV3D-7A0A0C4DH55 119 aa8.27□□□□□ -1.09
NEDD1-213ENST00000557644 BPY2O14599 106 aa8.27□□□□□ -1.09
NEDD1-213ENST00000557644 LINC00313P59037 77 aa8.26□□□□□ -1.09
NEDD1-213ENST00000557644 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
NEDD1-213ENST00000557644 NDUFB1O75438 58 aa8.25□□□□□ -1.09
NEDD1-213ENST00000557644 MUC2Q02817 5179 aa8.24□□□□□ -1.09
NEDD1-213ENST00000557644 K7EQZ3 153 aa8.24□□□□□ -1.09
NEDD1-213ENST00000557644 MUC17Q685J3 4493 aa8.23□□□□□ -1.09
NEDD1-213ENST00000557644 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
NEDD1-213ENST00000557644 FAM240AA0A1B0GVK7 77 aa8.22□□□□□ -1.09
NEDD1-213ENST00000557644 Q8N9L7 120 aa8.22□□□□□ -1.09
NEDD1-213ENST00000557644 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
NEDD1-213ENST00000557644 ACYP1P07311 99 aa8.22□□□□□ -1.09
NEDD1-213ENST00000557644 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.1
NEDD1-213ENST00000557644 C8orf87E5RJ46 101 aa8.2□□□□□ -1.1
NEDD1-213ENST00000557644 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
NEDD1-213ENST00000557644 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
NEDD1-213ENST00000557644 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
NEDD1-213ENST00000557644 PCOTHQ58A44 107 aa8.18□□□□□ -1.1
NEDD1-213ENST00000557644 Q75L30 129 aa8.18□□□□□ -1.1
NEDD1-213ENST00000557644 A8MUU9 505 aa8.17□□□□□ -1.1
NEDD1-213ENST00000557644 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.1
NEDD1-213ENST00000557644 J3QR89 54 aa8.13□□□□□ -1.11
NEDD1-213ENST00000557644 CXCL6P80162 114 aa8.13□□□□□ -1.11
NEDD1-213ENST00000557644 KRTAP4-1Q9BYQ7 146 aa8.12□□□□□ -1.11
NEDD1-213ENST00000557644 hDV103S1A0JD37 113 aa8.1□□□□□ -1.11
NEDD1-213ENST00000557644 ATP11AUNQ6ZP68 121 aa8.1□□□□□ -1.11
NEDD1-213ENST00000557644 WFDC13Q8IUB5 93 aa8.09□□□□□ -1.11
NEDD1-213ENST00000557644 Q8N9P0 234 aaPredicted RBP8.08□□□□□ -1.12
NEDD1-213ENST00000557644 LINC00643Q86TS7 51 aa8.07□□□□□ -1.12
NEDD1-213ENST00000557644 TMEM254Q8TBM7 123 aa8.07□□□□□ -1.12
NEDD1-213ENST00000557644 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
NEDD1-213ENST00000557644 CASC2Q6XLA1 102 aa8.06□□□□□ -1.12
NEDD1-213ENST00000557644 ATP5EP2Q5VTU8 51 aa8.05□□□□□ -1.12
NEDD1-213ENST00000557644 HCG22E2RYF7 251 aa8.04□□□□□ -1.12
NEDD1-213ENST00000557644 K7ERU9 68 aa8.04□□□□□ -1.12
NEDD1-213ENST00000557644 NDUFS5O43920 106 aa8.02□□□□□ -1.13
NEDD1-213ENST00000557644 HIST1H4AP62805 103 aaKnown RBP8.02□□□□□ -1.13
NEDD1-213ENST00000557644 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
NEDD1-213ENST00000557644 A0A087WVE0 104 aa7.97□□□□□ -1.13
NEDD1-213ENST00000557644 Q5W150 140 aa7.92□□□□□ -1.14
NEDD1-213ENST00000557644 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.14
NEDD1-213ENST00000557644 MT-ATP8P03928 68 aa7.9□□□□□ -1.15
NEDD1-213ENST00000557644 SPINK7P58062 85 aa7.86□□□□□ -1.15
NEDD1-213ENST00000557644 KRTAP19-2Q3LHN2 52 aa7.86□□□□□ -1.15
NEDD1-213ENST00000557644 TP53AIP1Q9HCN2 124 aa7.83□□□□□ -1.16
NEDD1-213ENST00000557644 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
NEDD1-213ENST00000557644 HRES1P13985 223 aa7.81□□□□□ -1.16
NEDD1-213ENST00000557644 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
NEDD1-213ENST00000557644 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
NEDD1-213ENST00000557644 IGKV2-30P06310 120 aa7.8□□□□□ -1.16
NEDD1-213ENST00000557644 IMUPQ9GZP8 106 aa7.8□□□□□ -1.16
NEDD1-213ENST00000557644 COX6B2Q6YFQ2 88 aa7.76□□□□□ -1.17
NEDD1-213ENST00000557644 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
NEDD1-213ENST00000557644 C7orf65Q6ZTY9 151 aa7.75□□□□□ -1.17
NEDD1-213ENST00000557644 TRAV22A0A0B4J277 110 aa7.74□□□□□ -1.17
NEDD1-213ENST00000557644 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
NEDD1-213ENST00000557644 UQCRQO14949 82 aa7.74□□□□□ -1.17
NEDD1-213ENST00000557644 SCGB1A1P11684 91 aa7.73□□□□□ -1.17
NEDD1-213ENST00000557644 FAM236AA0A1B0GUQ0 79 aa7.71□□□□□ -1.18
NEDD1-213ENST00000557644 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
NEDD1-213ENST00000557644 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.18
NEDD1-213ENST00000557644 H0Y9P7 68 aa7.69□□□□□ -1.18
NEDD1-213ENST00000557644 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
NEDD1-213ENST00000557644 FLGP20930 4061 aaPredicted RBP7.68□□□□□ -1.18
NEDD1-213ENST00000557644 FAM236DA0A1B0GTK5 79 aa7.68□□□□□ -1.18
NEDD1-213ENST00000557644 FAM236CP0DP71 79 aa7.68□□□□□ -1.18
NEDD1-213ENST00000557644 MT1HP80294 61 aa7.67□□□□□ -1.18
NEDD1-213ENST00000557644 CYP4F30PQ9H0H9 118 aa7.65□□□□□ -1.18
NEDD1-213ENST00000557644 ATOX1O00244 68 aa7.63□□□□□ -1.19
NEDD1-213ENST00000557644 C4orf26Q17RF5 130 aa7.63□□□□□ -1.19
NEDD1-213ENST00000557644 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
NEDD1-213ENST00000557644 LINC00208Q96KT6 92 aa7.62□□□□□ -1.19
NEDD1-213ENST00000557644 C1orf64Q8NEQ6 169 aa7.61□□□□□ -1.19
NEDD1-213ENST00000557644 C5orf47Q569G3 176 aa7.61□□□□□ -1.19
NEDD1-213ENST00000557644 MP68P56378 58 aa7.6□□□□□ -1.19
NEDD1-213ENST00000557644 TRAV7A0A075B6U4 112 aa7.56□□□□□ -1.2
NEDD1-213ENST00000557644 M0R2T5 61 aa7.56□□□□□ -1.2
NEDD1-213ENST00000557644 SMIM20Q8N5G0 67 aa7.56□□□□□ -1.2
NEDD1-213ENST00000557644 KLKP1Q107X0 134 aa7.54□□□□□ -1.2
NEDD1-213ENST00000557644 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
NEDD1-213ENST00000557644 H3BPC8 53 aa7.52□□□□□ -1.21
NEDD1-213ENST00000557644 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
NEDD1-213ENST00000557644 SERP2Q8N6R1 65 aa7.47□□□□□ -1.21
NEDD1-213ENST00000557644 KRTAP10-6P60371 365 aaPredicted RBP7.45□□□□□ -1.22
NEDD1-213ENST00000557644 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
NEDD1-213ENST00000557644 SNURFQ9Y675 71 aa7.43□□□□□ -1.22
NEDD1-213ENST00000557644 C20orf197Q8N268 126 aa7.41□□□□□ -1.22
NEDD1-213ENST00000557644 COX7CP15954 63 aa7.36□□□□□ -1.23
NEDD1-213ENST00000557644 S4R3F8 94 aa7.36□□□□□ -1.23
NEDD1-213ENST00000557644 LCA10Q71F78 164 aa7.35□□□□□ -1.23
NEDD1-213ENST00000557644 ANAPC13Q9BS18 74 aa7.33□□□□□ -1.24
NEDD1-213ENST00000557644 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
NEDD1-213ENST00000557644 A8MUN3 132 aa7.32□□□□□ -1.24
NEDD1-213ENST00000557644 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
NEDD1-213ENST00000557644 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
NEDD1-213ENST00000557644 MT2AP02795 61 aa7.26□□□□□ -1.25
NEDD1-213ENST00000557644 CYSTM1Q9H1C7 97 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms