RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 H0YAA0 97 aa6.12□□□□□ -1.43
NEK9-210ENST00000557026 CHD7Q9P2D1 2997 aa6.12□□□□□ -1.43
NEK9-210ENST00000557026 XIRP2A4UGR9 3374 aa6.1□□□□□ -1.43
NEK9-210ENST00000557026 ITPR1Q14643 2758 aa6.09□□□□□ -1.44
NEK9-210ENST00000557026 NIPBLQ6KC79 2804 aaeCLIP6.06□□□□□ -1.44
NEK9-210ENST00000557026 NBEAL2Q6ZNJ1 2754 aa6.05□□□□□ -1.44
NEK9-210ENST00000557026 P0C880 135 aa6.02□□□□□ -1.45
NEK9-210ENST00000557026 MGAQ8IWI9 3026 aa6.02□□□□□ -1.45
NEK9-210ENST00000557026 TRIOO75962 3097 aa6□□□□□ -1.45
NEK9-210ENST00000557026 DSPP15924 2871 aaKnown RBP5.99□□□□□ -1.45
NEK9-210ENST00000557026 NDUFAF8A1L188 74 aa5.95□□□□□ -1.46
NEK9-210ENST00000557026 FLNCQ14315 2725 aa5.92□□□□□ -1.46
NEK9-210ENST00000557026 C5orf42Q9H799 3197 aa5.92□□□□□ -1.46
NEK9-210ENST00000557026 APCP25054 2843 aa5.9□□□□□ -1.46
NEK9-210ENST00000557026 DMDP11532 3685 aa5.9□□□□□ -1.47
NEK9-210ENST00000557026 WDFY4Q6ZS81 3184 aa5.88□□□□□ -1.47
NEK9-210ENST00000557026 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
NEK9-210ENST00000557026 UTP20O75691 2785 aaKnown RBP5.85□□□□□ -1.47
NEK9-210ENST00000557026 MYO15AQ9UKN7 3530 aa5.84□□□□□ -1.48
NEK9-210ENST00000557026 VPS13AQ96RL7 3174 aa5.82□□□□□ -1.48
NEK9-210ENST00000557026 FRYLO94915 3013 aa5.82□□□□□ -1.48
NEK9-210ENST00000557026 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
NEK9-210ENST00000557026 LAMA1P25391 3075 aa5.79□□□□□ -1.48
NEK9-210ENST00000557026 DCHS1Q96JQ0 3298 aa5.77□□□□□ -1.49
NEK9-210ENST00000557026 FRYQ5TBA9 3013 aa5.74□□□□□ -1.49
NEK9-210ENST00000557026 DNAH14Q0VDD8 3507 aa5.73□□□□□ -1.49
NEK9-210ENST00000557026 WDFY3Q8IZQ1 3526 aa5.72□□□□□ -1.49
NEK9-210ENST00000557026 TENM3Q9P273 2699 aa5.72□□□□□ -1.49
NEK9-210ENST00000557026 TENM1Q9UKZ4 2725 aa5.69□□□□□ -1.5
NEK9-210ENST00000557026 LRBAP50851 2863 aa5.68□□□□□ -1.5
NEK9-210ENST00000557026 DMXL1Q9Y485 3027 aa5.67□□□□□ -1.5
NEK9-210ENST00000557026 TENM2Q9NT68 2774 aa5.67□□□□□ -1.5
NEK9-210ENST00000557026 CFAP54Q96N23 3096 aa5.65□□□□□ -1.5
NEK9-210ENST00000557026 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
NEK9-210ENST00000557026 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
NEK9-210ENST00000557026 SPEGQ15772 3267 aa5.6□□□□□ -1.51
NEK9-210ENST00000557026 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
NEK9-210ENST00000557026 ASPMQ8IZT6 3477 aa5.58□□□□□ -1.52
NEK9-210ENST00000557026 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
NEK9-210ENST00000557026 TACC2O95359 2948 aa5.54□□□□□ -1.52
NEK9-210ENST00000557026 ZZEF1O43149 2961 aa5.52□□□□□ -1.53
NEK9-210ENST00000557026 ZFHX4Q86UP3 3567 aa5.52□□□□□ -1.53
NEK9-210ENST00000557026 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
NEK9-210ENST00000557026 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
NEK9-210ENST00000557026 CFAP47Q6ZTR5 3102 aa5.5□□□□□ -1.53
NEK9-210ENST00000557026 DCHS2Q6V1P9 2916 aa5.48□□□□□ -1.53
NEK9-210ENST00000557026 FREM2Q5SZK8 3169 aa5.47□□□□□ -1.53
NEK9-210ENST00000557026 CELSR2Q9HCU4 2923 aa5.47□□□□□ -1.53
NEK9-210ENST00000557026 LAMA5O15230 3695 aa5.47□□□□□ -1.53
NEK9-210ENST00000557026 COL12A1Q99715 3063 aa5.47□□□□□ -1.53
NEK9-210ENST00000557026 CELSR3Q9NYQ7 3312 aa5.47□□□□□ -1.53
NEK9-210ENST00000557026 NF1P21359 2839 aa5.47□□□□□ -1.53
NEK9-210ENST00000557026 KALRNO60229 2985 aa5.46□□□□□ -1.53
NEK9-210ENST00000557026 MXRA5Q9NR99 2828 aa5.46□□□□□ -1.54
NEK9-210ENST00000557026 ATMQ13315 3056 aa5.45□□□□□ -1.54
NEK9-210ENST00000557026 CRYBG3Q68DQ2 2970 aa5.45□□□□□ -1.54
NEK9-210ENST00000557026 LOC400499M0QZD8 3231 aa5.45□□□□□ -1.54
NEK9-210ENST00000557026 NBEAQ8NFP9 2946 aa5.42□□□□□ -1.54
NEK9-210ENST00000557026 TGP01266 2768 aa5.42□□□□□ -1.54
NEK9-210ENST00000557026 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
NEK9-210ENST00000557026 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
NEK9-210ENST00000557026 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
NEK9-210ENST00000557026 DMXL2Q8TDJ6 3036 aa5.39□□□□□ -1.55
NEK9-210ENST00000557026 KRTAP10-4P60372 401 aaPredicted RBP5.39□□□□□ -1.55
NEK9-210ENST00000557026 SMG1Q96Q15 3661 aaKnown RBP5.38□□□□□ -1.55
NEK9-210ENST00000557026 SPENQ96T58 3664 aaKnown RBP5.35□□□□□ -1.55
NEK9-210ENST00000557026 INE1O15225 51 aa5.35□□□□□ -1.55
NEK9-210ENST00000557026 BSNQ9UPA5 3926 aa5.32□□□□□ -1.56
NEK9-210ENST00000557026 ZANQ9Y493 2812 aa5.32□□□□□ -1.56
NEK9-210ENST00000557026 HRNRQ86YZ3 2850 aaPredicted RBP5.3□□□□□ -1.56
NEK9-210ENST00000557026 PDZD2O15018 2839 aa5.29□□□□□ -1.56
NEK9-210ENST00000557026 FBN3Q75N90 2809 aa5.26□□□□□ -1.57
NEK9-210ENST00000557026 KRTAP12-3P60328 96 aa5.21□□□□□ -1.58
NEK9-210ENST00000557026 KRTAP3-2Q9BYR7 98 aa5.21□□□□□ -1.58
NEK9-210ENST00000557026 BOD1L1Q8NFC6 3051 aa5.2□□□□□ -1.58
NEK9-210ENST00000557026 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
NEK9-210ENST00000557026 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
NEK9-210ENST00000557026 CELSR1Q9NYQ6 3014 aa5.16□□□□□ -1.58
NEK9-210ENST00000557026 HUWE1Q7Z6Z7 4374 aaKnown RBP5.16□□□□□ -1.58
NEK9-210ENST00000557026 ADGRG4Q8IZF6 3080 aa5.15□□□□□ -1.58
NEK9-210ENST00000557026 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.59
NEK9-210ENST00000557026 RELNP78509 3460 aa5.14□□□□□ -1.59
NEK9-210ENST00000557026 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
NEK9-210ENST00000557026 ZFHX3Q15911 3703 aa5.12□□□□□ -1.59
NEK9-210ENST00000557026 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
NEK9-210ENST00000557026 ALMS1Q8TCU4 4167 aa5.07□□□□□ -1.6
NEK9-210ENST00000557026 FBN2P35556 2912 aa5.06□□□□□ -1.6
NEK9-210ENST00000557026 OTOGQ6ZRI0 2925 aa5.03□□□□□ -1.6
NEK9-210ENST00000557026 NBPF19A0A087WUL8 3843 aa5.02□□□□□ -1.61
NEK9-210ENST00000557026 VWFP04275 2813 aa4.98□□□□□ -1.61
NEK9-210ENST00000557026 CSMD1Q96PZ7 3565 aa4.98□□□□□ -1.61
NEK9-210ENST00000557026 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
NEK9-210ENST00000557026 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
NEK9-210ENST00000557026 CSMD2Q7Z408 3487 aa4.94□□□□□ -1.62
NEK9-210ENST00000557026 MT1HP80294 61 aa4.89□□□□□ -1.63
NEK9-210ENST00000557026 SPRR2GQ9BYE4 73 aa4.89□□□□□ -1.63
NEK9-210ENST00000557026 VPS13CQ709C8 3753 aa4.89□□□□□ -1.63
NEK9-210ENST00000557026 ZNF469Q96JG9 3925 aaPredicted RBP4.88□□□□□ -1.63
NEK9-210ENST00000557026 AKAP9Q99996 3911 aa4.87□□□□□ -1.63
NEK9-210ENST00000557026 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms