RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 C1orf64Q8NEQ6 169 aa12.47□□□□□ -0.41
ARHGEF40-204ENST00000555038 MRPL34Q9BQ48 92 aaKnown RBP12.47□□□□□ -0.41
ARHGEF40-204ENST00000555038 FP248Q71RG6 208 aaPredicted RBP12.46□□□□□ -0.42
ARHGEF40-204ENST00000555038 C4orf26Q17RF5 130 aa12.44□□□□□ -0.42
ARHGEF40-204ENST00000555038 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
ARHGEF40-204ENST00000555038 C8orf87E5RJ46 101 aa12.41□□□□□ -0.42
ARHGEF40-204ENST00000555038 A0A087X002 238 aa12.39□□□□□ -0.43
ARHGEF40-204ENST00000555038 KRTAP13-2Q52LG2 175 aa12.39□□□□□ -0.43
ARHGEF40-204ENST00000555038 SPINK6Q6UWN8 80 aa12.38□□□□□ -0.43
ARHGEF40-204ENST00000555038 NDUFS5O43920 106 aa12.37□□□□□ -0.43
ARHGEF40-204ENST00000555038 LINC00336Q6ZUF6 198 aa12.35□□□□□ -0.43
ARHGEF40-204ENST00000555038 KRTAP1-4P0C5Y4 121 aa12.35□□□□□ -0.43
ARHGEF40-204ENST00000555038 NOTCH2NLQ7Z3S9 236 aa12.34□□□□□ -0.43
ARHGEF40-204ENST00000555038 SACSQ9NZJ4 4579 aa12.34□□□□□ -0.43
ARHGEF40-204ENST00000555038 LIMD2Q9BT23 127 aa12.32□□□□□ -0.44
ARHGEF40-204ENST00000555038 PRR4Q16378 134 aa12.3□□□□□ -0.44
ARHGEF40-204ENST00000555038 IGLV7-46A0A075B6I9 117 aa12.29□□□□□ -0.44
ARHGEF40-204ENST00000555038 C1orf195Q5TG92 126 aa12.27□□□□□ -0.45
ARHGEF40-204ENST00000555038 KMT2CQ8NEZ4 4911 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-204ENST00000555038 VPS13BQ7Z7G8 4022 aa12.26□□□□□ -0.45
ARHGEF40-204ENST00000555038 LOC101927531A0A1B0GV80 90 aa12.24□□□□□ -0.45
ARHGEF40-204ENST00000555038 LINC00313P59037 77 aa12.23□□□□□ -0.45
ARHGEF40-204ENST00000555038 PLA2G1BP04054 148 aaKnown RBP12.23□□□□□ -0.45
ARHGEF40-204ENST00000555038 MPLKIPQ8TAP9 179 aa12.23□□□□□ -0.45
ARHGEF40-204ENST00000555038 Q1T7F1 81 aa12.22□□□□□ -0.45
ARHGEF40-204ENST00000555038 KRTAP13-3Q3SY46 172 aa12.2□□□□□ -0.46
ARHGEF40-204ENST00000555038 C4orf48Q5BLP8 95 aa12.2□□□□□ -0.46
ARHGEF40-204ENST00000555038 TYMSOSQ8TAI1 123 aa12.19□□□□□ -0.46
ARHGEF40-204ENST00000555038 SPINK1P00995 79 aa12.18□□□□□ -0.46
ARHGEF40-204ENST00000555038 PCOTHQ58A44 107 aa12.18□□□□□ -0.46
ARHGEF40-204ENST00000555038 RYR2Q92736 4967 aa12.18□□□□□ -0.46
ARHGEF40-204ENST00000555038 Q8N9P0 234 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF40-204ENST00000555038 V9GYY9 64 aa12.15□□□□□ -0.46
ARHGEF40-204ENST00000555038 A0A1B0GVY2 172 aa12.14□□□□□ -0.47
ARHGEF40-204ENST00000555038 FAM229AH3BQW9 127 aa12.14□□□□□ -0.47
ARHGEF40-204ENST00000555038 RPS29P62273 56 aaKnown RBP12.14□□□□□ -0.47
ARHGEF40-204ENST00000555038 Q5W150 140 aa12.14□□□□□ -0.47
ARHGEF40-204ENST00000555038 DYNC1H1Q14204 4646 aaKnown RBP12.13□□□□□ -0.47
ARHGEF40-204ENST00000555038 PKHD1P08F94 4074 aa12.11□□□□□ -0.47
ARHGEF40-204ENST00000555038 SPAG11AQ6PDA7 123 aa12.1□□□□□ -0.47
ARHGEF40-204ENST00000555038 KRTAP16-1A8MUX0 517 aa12.08□□□□□ -0.48
ARHGEF40-204ENST00000555038 COA5Q86WW8 74 aa12.08□□□□□ -0.48
ARHGEF40-204ENST00000555038 RYR3Q15413 4870 aa12.08□□□□□ -0.48
ARHGEF40-204ENST00000555038 LINC00304Q8N9R0 145 aa12.05□□□□□ -0.48
ARHGEF40-204ENST00000555038 PRR26Q8N8Z3 221 aa12.01□□□□□ -0.49
ARHGEF40-204ENST00000555038 PRO0628Q9UI54 55 aa12□□□□□ -0.49
ARHGEF40-204ENST00000555038 APOBP04114 4563 aaKnown RBP12□□□□□ -0.49
ARHGEF40-204ENST00000555038 SMR3BP02814 79 aaPredicted RBP11.97□□□□□ -0.49
ARHGEF40-204ENST00000555038 IGKV2-30P06310 120 aa11.97□□□□□ -0.49
ARHGEF40-204ENST00000555038 KRTAP10-4P60372 401 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF40-204ENST00000555038 HRES1P13985 223 aa11.94□□□□□ -0.5
ARHGEF40-204ENST00000555038 PSPHP1O15172 72 aa11.9□□□□□ -0.5
ARHGEF40-204ENST00000555038 BRK1Q8WUW1 75 aa11.9□□□□□ -0.5
ARHGEF40-204ENST00000555038 PKHD1L1Q86WI1 4243 aa11.89□□□□□ -0.51
ARHGEF40-204ENST00000555038 ACYP2P14621 99 aa11.88□□□□□ -0.51
ARHGEF40-204ENST00000555038 A8MUN3 132 aa11.87□□□□□ -0.51
ARHGEF40-204ENST00000555038 DMAC1Q96GE9 116 aa11.87□□□□□ -0.51
ARHGEF40-204ENST00000555038 FAT1Q14517 4588 aa11.86□□□□□ -0.51
ARHGEF40-204ENST00000555038 RETNLBQ9BQ08 111 aa11.85□□□□□ -0.51
ARHGEF40-204ENST00000555038 Q5VV11 94 aa11.84□□□□□ -0.51
ARHGEF40-204ENST00000555038 LINC01558Q9Y6Z2 57 aa11.82□□□□□ -0.52
ARHGEF40-204ENST00000555038 PRR15LQ9BU68 103 aa11.8□□□□□ -0.52
ARHGEF40-204ENST00000555038 Q75L30 129 aa11.77□□□□□ -0.53
ARHGEF40-204ENST00000555038 IGKV2D-30A0A075B6S6 120 aa11.74□□□□□ -0.53
ARHGEF40-204ENST00000555038 CHKB-CPT1BH3BT56 60 aa11.71□□□□□ -0.54
ARHGEF40-204ENST00000555038 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
ARHGEF40-204ENST00000555038 C20orf166-AS1Q96NR2 134 aa11.69□□□□□ -0.54
ARHGEF40-204ENST00000555038 A8MUU9 505 aa11.68□□□□□ -0.54
ARHGEF40-204ENST00000555038 EPPK1P58107 5090 aaKnown RBP11.66□□□□□ -0.54
ARHGEF40-204ENST00000555038 C9orf92A6NGG3 77 aa11.59□□□□□ -0.55
ARHGEF40-204ENST00000555038 A6NED7 52 aa11.56□□□□□ -0.56
ARHGEF40-204ENST00000555038 KRTAP10-8P60410 259 aa11.54□□□□□ -0.56
ARHGEF40-204ENST00000555038 Q5VSD8 79 aa11.54□□□□□ -0.56
ARHGEF40-204ENST00000555038 HSPG2P98160 4391 aa11.51□□□□□ -0.57
ARHGEF40-204ENST00000555038 Q8N1X5 172 aa11.49□□□□□ -0.57
ARHGEF40-204ENST00000555038 CDC42SE1Q9NRR8 79 aa11.49□□□□□ -0.57
ARHGEF40-204ENST00000555038 FLG2Q5D862 2391 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF40-204ENST00000555038 TNXBP22105 4242 aa11.47□□□□□ -0.57
ARHGEF40-204ENST00000555038 FAT3Q8TDW7 4589 aa11.47□□□□□ -0.57
ARHGEF40-204ENST00000555038 LCA10Q71F78 164 aa11.45□□□□□ -0.58
ARHGEF40-204ENST00000555038 RYR1P21817 5038 aa11.45□□□□□ -0.58
ARHGEF40-204ENST00000555038 A0A1B0GU69 56 aa11.42□□□□□ -0.58
ARHGEF40-204ENST00000555038 BIRC6Q9NR09 4857 aa11.42□□□□□ -0.58
ARHGEF40-204ENST00000555038 ATP11AUNQ6ZP68 121 aa11.41□□□□□ -0.58
ARHGEF40-204ENST00000555038 SPINK7P58062 85 aa11.4□□□□□ -0.58
ARHGEF40-204ENST00000555038 A8MU10 97 aa11.39□□□□□ -0.59
ARHGEF40-204ENST00000555038 KIAA1109Q2LD37 5005 aa11.38□□□□□ -0.59
ARHGEF40-204ENST00000555038 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
ARHGEF40-204ENST00000555038 LRP1Q07954 4544 aaKnown RBP11.35□□□□□ -0.59
ARHGEF40-204ENST00000555038 PMAIP1Q13794 54 aa11.28□□□□□ -0.6
ARHGEF40-204ENST00000555038 RPL37P61927 97 aaKnown RBP11.24□□□□□ -0.61
ARHGEF40-204ENST00000555038 KRTAP3-1Q9BYR8 98 aa11.24□□□□□ -0.61
ARHGEF40-204ENST00000555038 COX6B2Q6YFQ2 88 aa11.22□□□□□ -0.61
ARHGEF40-204ENST00000555038 UQCR11O14957 56 aa11.21□□□□□ -0.61
ARHGEF40-204ENST00000555038 SEC61GP60059 68 aa11.2□□□□□ -0.62
ARHGEF40-204ENST00000555038 SPATA8Q6RVD6 105 aa11.19□□□□□ -0.62
ARHGEF40-204ENST00000555038 KRTAP17-1Q9BYP8 105 aa11.19□□□□□ -0.62
ARHGEF40-204ENST00000555038 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
ARHGEF40-204ENST00000555038 HERC2O95714 4834 aa11.16□□□□□ -0.62
ARHGEF40-204ENST00000555038 XP32Q5T750 250 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms