RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 LRP2P98164 4655 aa9.04□□□□□ -0.96
SPTLC2-203ENST00000554901 NDUFB1O75438 58 aa9.02□□□□□ -0.97
SPTLC2-203ENST00000554901 LPAP08519 4548 aa9.02□□□□□ -0.97
SPTLC2-203ENST00000554901 C9orf92A6NGG3 77 aa9.01□□□□□ -0.97
SPTLC2-203ENST00000554901 A8MWP4 228 aa9□□□□□ -0.97
SPTLC2-203ENST00000554901 BPY2O14599 106 aa9□□□□□ -0.97
SPTLC2-203ENST00000554901 A0A1B0GVX0 72 aa9□□□□□ -0.97
SPTLC2-203ENST00000554901 MT-ATP8P03928 68 aa9□□□□□ -0.97
SPTLC2-203ENST00000554901 XP32Q5T750 250 aa8.99□□□□□ -0.97
SPTLC2-203ENST00000554901 C8orf87E5RJ46 101 aa8.98□□□□□ -0.97
SPTLC2-203ENST00000554901 LINC00313P59037 77 aa8.97□□□□□ -0.97
SPTLC2-203ENST00000554901 IGHV6-1A0A0B4J1U7 121 aa8.96□□□□□ -0.97
SPTLC2-203ENST00000554901 DSCR10P59022 87 aa8.96□□□□□ -0.97
SPTLC2-203ENST00000554901 PRR15Q8IV56 129 aa8.95□□□□□ -0.98
SPTLC2-203ENST00000554901 IGKV3D-7A0A0C4DH55 119 aa8.95□□□□□ -0.98
SPTLC2-203ENST00000554901 ANAPC13Q9BS18 74 aa8.94□□□□□ -0.98
SPTLC2-203ENST00000554901 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
SPTLC2-203ENST00000554901 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
SPTLC2-203ENST00000554901 CXCL6P80162 114 aa8.92□□□□□ -0.98
SPTLC2-203ENST00000554901 K7EQZ3 153 aa8.9□□□□□ -0.99
SPTLC2-203ENST00000554901 NOTCH2NLQ7Z3S9 236 aa8.9□□□□□ -0.99
SPTLC2-203ENST00000554901 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
SPTLC2-203ENST00000554901 Q75L30 129 aa8.89□□□□□ -0.99
SPTLC2-203ENST00000554901 C20orf166-AS1Q96NR2 134 aa8.89□□□□□ -0.99
SPTLC2-203ENST00000554901 C8orf17Q9NRJ1 99 aa8.89□□□□□ -0.99
SPTLC2-203ENST00000554901 KRTAP16-1A8MUX0 517 aa8.88□□□□□ -0.99
SPTLC2-203ENST00000554901 RPL37P61927 97 aaKnown RBP8.88□□□□□ -0.99
SPTLC2-203ENST00000554901 ATP5EP2Q5VTU8 51 aa8.88□□□□□ -0.99
SPTLC2-203ENST00000554901 A8MUU9 505 aa8.85□□□□□ -0.99
SPTLC2-203ENST00000554901 LINC00643Q86TS7 51 aa8.85□□□□□ -0.99
SPTLC2-203ENST00000554901 IMUPQ9GZP8 106 aa8.85□□□□□ -0.99
SPTLC2-203ENST00000554901 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
SPTLC2-203ENST00000554901 Q8N9L7 120 aa8.83□□□□□ -1
SPTLC2-203ENST00000554901 UBR4Q5T4S7 5183 aa8.83□□□□□ -1
SPTLC2-203ENST00000554901 TMEM254Q8TBM7 123 aa8.81□□□□□ -1
SPTLC2-203ENST00000554901 hDV103S1A0JD37 113 aa8.8□□□□□ -1
SPTLC2-203ENST00000554901 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
SPTLC2-203ENST00000554901 ATP11AUNQ6ZP68 121 aa8.79□□□□□ -1
SPTLC2-203ENST00000554901 MRPL34Q9BQ48 92 aaKnown RBP8.78□□□□□ -1
SPTLC2-203ENST00000554901 MUC17Q685J3 4493 aa8.77□□□□□ -1.01
SPTLC2-203ENST00000554901 PCOTHQ58A44 107 aa8.76□□□□□ -1.01
SPTLC2-203ENST00000554901 CASC2Q6XLA1 102 aa8.76□□□□□ -1.01
SPTLC2-203ENST00000554901 HCG22E2RYF7 251 aa8.75□□□□□ -1.01
SPTLC2-203ENST00000554901 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
SPTLC2-203ENST00000554901 HIST1H4AP62805 103 aaKnown RBP8.7□□□□□ -1.02
SPTLC2-203ENST00000554901 ZCCHC13Q8WW36 166 aaKnown RBP8.68□□□□□ -1.02
SPTLC2-203ENST00000554901 CCDC179H3BU77 68 aa8.67□□□□□ -1.02
SPTLC2-203ENST00000554901 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
SPTLC2-203ENST00000554901 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
SPTLC2-203ENST00000554901 NDUFS5O43920 106 aa8.66□□□□□ -1.02
SPTLC2-203ENST00000554901 RNF213Q63HN8 5207 aa8.64□□□□□ -1.03
SPTLC2-203ENST00000554901 ATOX1O00244 68 aa8.63□□□□□ -1.03
SPTLC2-203ENST00000554901 UQCRQO14949 82 aa8.63□□□□□ -1.03
SPTLC2-203ENST00000554901 KRTAP4-1Q9BYQ7 146 aa8.63□□□□□ -1.03
SPTLC2-203ENST00000554901 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
SPTLC2-203ENST00000554901 A0A087WVE0 104 aa8.59□□□□□ -1.03
SPTLC2-203ENST00000554901 SVIPQ8NHG7 77 aa8.59□□□□□ -1.03
SPTLC2-203ENST00000554901 MUC2Q02817 5179 aa8.59□□□□□ -1.03
SPTLC2-203ENST00000554901 COX7CP15954 63 aa8.56□□□□□ -1.04
SPTLC2-203ENST00000554901 A0A0U1RQV1 116 aa8.54□□□□□ -1.04
SPTLC2-203ENST00000554901 Q5W150 140 aa8.53□□□□□ -1.04
SPTLC2-203ENST00000554901 SPINK7P58062 85 aa8.49□□□□□ -1.05
SPTLC2-203ENST00000554901 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
SPTLC2-203ENST00000554901 SMIM20Q8N5G0 67 aa8.47□□□□□ -1.05
SPTLC2-203ENST00000554901 TRAV22A0A0B4J277 110 aa8.44□□□□□ -1.06
SPTLC2-203ENST00000554901 C7orf65Q6ZTY9 151 aa8.44□□□□□ -1.06
SPTLC2-203ENST00000554901 OCR1Q9BZK8 76 aa8.44□□□□□ -1.06
SPTLC2-203ENST00000554901 TMEM258P61165 79 aa8.43□□□□□ -1.06
SPTLC2-203ENST00000554901 HRES1P13985 223 aa8.42□□□□□ -1.06
SPTLC2-203ENST00000554901 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
SPTLC2-203ENST00000554901 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
SPTLC2-203ENST00000554901 RPS28P62857 69 aaKnown RBP8.41□□□□□ -1.06
SPTLC2-203ENST00000554901 KRTAP19-2Q3LHN2 52 aa8.39□□□□□ -1.07
SPTLC2-203ENST00000554901 MPLKIPQ8TAP9 179 aa8.39□□□□□ -1.07
SPTLC2-203ENST00000554901 RBM12B-AS1Q9P1G2 102 aa8.39□□□□□ -1.07
SPTLC2-203ENST00000554901 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
SPTLC2-203ENST00000554901 H0Y9P7 68 aa8.36□□□□□ -1.07
SPTLC2-203ENST00000554901 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
SPTLC2-203ENST00000554901 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
SPTLC2-203ENST00000554901 LCE2CQ5TA81 110 aa8.34□□□□□ -1.07
SPTLC2-203ENST00000554901 FAT4Q6V0I7 4981 aa8.34□□□□□ -1.07
SPTLC2-203ENST00000554901 MP68P56378 58 aa8.34□□□□□ -1.08
SPTLC2-203ENST00000554901 TRAV7A0A075B6U4 112 aa8.32□□□□□ -1.08
SPTLC2-203ENST00000554901 CYP4F30PQ9H0H9 118 aa8.31□□□□□ -1.08
SPTLC2-203ENST00000554901 H3BPC8 53 aa8.3□□□□□ -1.08
SPTLC2-203ENST00000554901 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
SPTLC2-203ENST00000554901 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
SPTLC2-203ENST00000554901 C1orf64Q8NEQ6 169 aa8.29□□□□□ -1.08
SPTLC2-203ENST00000554901 LINC00208Q96KT6 92 aa8.28□□□□□ -1.08
SPTLC2-203ENST00000554901 NDUFC1O43677 76 aa8.24□□□□□ -1.09
SPTLC2-203ENST00000554901 LCE2AQ5TA79 106 aaPredicted RBP8.24□□□□□ -1.09
SPTLC2-203ENST00000554901 C4orf26Q17RF5 130 aa8.22□□□□□ -1.09
SPTLC2-203ENST00000554901 C20orf197Q8N268 126 aa8.22□□□□□ -1.09
SPTLC2-203ENST00000554901 MT1HP80294 61 aa8.21□□□□□ -1.1
SPTLC2-203ENST00000554901 KLKP1Q107X0 134 aa8.21□□□□□ -1.1
SPTLC2-203ENST00000554901 ATP5EP56381 51 aaPredicted RBP8.2□□□□□ -1.1
SPTLC2-203ENST00000554901 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
SPTLC2-203ENST00000554901 FLGP20930 4061 aaPredicted RBP8.17□□□□□ -1.1
SPTLC2-203ENST00000554901 SERP1Q9Y6X1 66 aa8.17□□□□□ -1.1
SPTLC2-203ENST00000554901 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms