RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 FCGBPQ9Y6R7 5405 aaPredicted RBP10.95□□□□□ -0.66
GABRB3-206ENST00000554556 COX6CP09669 75 aa10.93□□□□□ -0.66
GABRB3-206ENST00000554556 A0A1B0GVX0 72 aa10.91□□□□□ -0.66
GABRB3-206ENST00000554556 UBE2V1Q13404 147 aa10.91□□□□□ -0.66
GABRB3-206ENST00000554556 LINC00846Q9NV44 126 aa10.91□□□□□ -0.66
GABRB3-206ENST00000554556 ZCCHC13Q8WW36 166 aaKnown RBP10.88□□□□□ -0.67
GABRB3-206ENST00000554556 VPS25Q9BRG1 176 aa10.87□□□□□ -0.67
GABRB3-206ENST00000554556 SPINK7P58062 85 aa10.85□□□□□ -0.67
GABRB3-206ENST00000554556 J3KT08 172 aa10.83□□□□□ -0.68
GABRB3-206ENST00000554556 RBM3P98179 157 aaKnown RBP10.83□□□□□ -0.68
GABRB3-206ENST00000554556 HSD52Q0P140 79 aa10.83□□□□□ -0.68
GABRB3-206ENST00000554556 C21orf62-AS1Q17RA5 79 aa10.82□□□□□ -0.68
GABRB3-206ENST00000554556 DSCR8Q96T75 97 aa10.82□□□□□ -0.68
GABRB3-206ENST00000554556 K7ERJ3 54 aa10.81□□□□□ -0.68
GABRB3-206ENST00000554556 A8MWP4 228 aa10.77□□□□□ -0.69
GABRB3-206ENST00000554556 NDUFB1O75438 58 aa10.77□□□□□ -0.69
GABRB3-206ENST00000554556 Q8N9P0 234 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-206ENST00000554556 SCGB1C2P0DMR2 95 aa10.74□□□□□ -0.69
GABRB3-206ENST00000554556 KRTAP19-6Q3LI70 58 aa10.74□□□□□ -0.69
GABRB3-206ENST00000554556 C9JAW5 83 aa10.73□□□□□ -0.69
GABRB3-206ENST00000554556 LYRM7Q5U5X0 104 aa10.73□□□□□ -0.69
GABRB3-206ENST00000554556 MACF1Q9UPN3 7388 aaKnown RBP10.71□□□□□ -0.7
GABRB3-206ENST00000554556 Q6ZQT0 140 aa10.7□□□□□ -0.7
GABRB3-206ENST00000554556 WFDC13Q8IUB5 93 aa10.7□□□□□ -0.7
GABRB3-206ENST00000554556 BAALC-AS2P0C853 105 aa10.67□□□□□ -0.7
GABRB3-206ENST00000554556 C8orf17Q9NRJ1 99 aa10.66□□□□□ -0.7
GABRB3-206ENST00000554556 PYY3Q5JQD4 70 aa10.62□□□□□ -0.71
GABRB3-206ENST00000554556 A0A1B0GW54 56 aa10.61□□□□□ -0.71
GABRB3-206ENST00000554556 UQCR10Q9UDW1 63 aa10.61□□□□□ -0.71
GABRB3-206ENST00000554556 SYNE2Q8WXH0 6885 aaKnown RBP10.6□□□□□ -0.71
GABRB3-206ENST00000554556 Q6ZVQ6 151 aa10.58□□□□□ -0.72
GABRB3-206ENST00000554556 IGKV3D-7A0A0C4DH55 119 aa10.57□□□□□ -0.72
GABRB3-206ENST00000554556 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
GABRB3-206ENST00000554556 PDE6GP18545 87 aa10.53□□□□□ -0.72
GABRB3-206ENST00000554556 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.73
GABRB3-206ENST00000554556 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
GABRB3-206ENST00000554556 PRR15Q8IV56 129 aa10.5□□□□□ -0.73
GABRB3-206ENST00000554556 ATXN8Q156A1 80 aa10.49□□□□□ -0.73
GABRB3-206ENST00000554556 MRPL34Q9BQ48 92 aaKnown RBP10.48□□□□□ -0.73
GABRB3-206ENST00000554556 KRTAP6-3Q3LI67 103 aa10.47□□□□□ -0.73
GABRB3-206ENST00000554556 TMEM254Q8TBM7 123 aa10.47□□□□□ -0.73
GABRB3-206ENST00000554556 NREPQ16612 68 aa10.46□□□□□ -0.73
GABRB3-206ENST00000554556 MMP24-AS1A0A0U1RRL7 71 aa10.42□□□□□ -0.74
GABRB3-206ENST00000554556 C14orf132Q9NPU4 83 aa10.42□□□□□ -0.74
GABRB3-206ENST00000554556 NDUFS5O43920 106 aa10.41□□□□□ -0.74
GABRB3-206ENST00000554556 hDV103S1A0JD37 113 aa10.39□□□□□ -0.75
GABRB3-206ENST00000554556 NAA38Q9BRA0 125 aaKnown RBP10.36□□□□□ -0.75
GABRB3-206ENST00000554556 IGKV2D-30A0A075B6S6 120 aa10.34□□□□□ -0.75
GABRB3-206ENST00000554556 M0R143 59 aa10.34□□□□□ -0.75
GABRB3-206ENST00000554556 IGKV2-30P06310 120 aa10.34□□□□□ -0.75
GABRB3-206ENST00000554556 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
GABRB3-206ENST00000554556 K7EQZ3 153 aa10.31□□□□□ -0.76
GABRB3-206ENST00000554556 Q5W150 140 aa10.24□□□□□ -0.77
GABRB3-206ENST00000554556 BPY2O14599 106 aa10.23□□□□□ -0.77
GABRB3-206ENST00000554556 TMA7Q9Y2S6 64 aaKnown RBP10.22□□□□□ -0.77
GABRB3-206ENST00000554556 C4orf26Q17RF5 130 aa10.19□□□□□ -0.78
GABRB3-206ENST00000554556 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
GABRB3-206ENST00000554556 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
GABRB3-206ENST00000554556 A6NN06 94 aa10.15□□□□□ -0.78
GABRB3-206ENST00000554556 HCG22E2RYF7 251 aa10.15□□□□□ -0.78
GABRB3-206ENST00000554556 CASC2Q6XLA1 102 aa10.15□□□□□ -0.78
GABRB3-206ENST00000554556 C5orf47Q569G3 176 aa10.14□□□□□ -0.79
GABRB3-206ENST00000554556 H3BT86 120 aa10.12□□□□□ -0.79
GABRB3-206ENST00000554556 CXCL6P80162 114 aa10.1□□□□□ -0.79
GABRB3-206ENST00000554556 Q5VV11 94 aa10.09□□□□□ -0.79
GABRB3-206ENST00000554556 Q8N9L7 120 aa10.07□□□□□ -0.8
GABRB3-206ENST00000554556 TSTD3H0UI37 97 aa10.06□□□□□ -0.8
GABRB3-206ENST00000554556 MT1BP07438 61 aa10.05□□□□□ -0.8
GABRB3-206ENST00000554556 CSAG1Q6PB30 78 aa10.05□□□□□ -0.8
GABRB3-206ENST00000554556 S4R3F8 94 aa10.05□□□□□ -0.8
GABRB3-206ENST00000554556 BATFQ16520 125 aa10.02□□□□□ -0.81
GABRB3-206ENST00000554556 KRTAP19-8Q3LI54 63 aa10.01□□□□□ -0.81
GABRB3-206ENST00000554556 SPRR2GQ9BYE4 73 aa10.01□□□□□ -0.81
GABRB3-206ENST00000554556 NEBP20929 6669 aa10□□□□□ -0.81
GABRB3-206ENST00000554556 KRTAP3-1Q9BYR8 98 aa9.99□□□□□ -0.81
GABRB3-206ENST00000554556 C9orf118A6NHY6 69 aa9.98□□□□□ -0.81
GABRB3-206ENST00000554556 C1orf64Q8NEQ6 169 aa9.98□□□□□ -0.81
GABRB3-206ENST00000554556 A0A1W2PPM0 123 aa9.94□□□□□ -0.82
GABRB3-206ENST00000554556 LCA10Q71F78 164 aa9.94□□□□□ -0.82
GABRB3-206ENST00000554556 KRTAP10-5P60370 271 aa9.93□□□□□ -0.82
GABRB3-206ENST00000554556 SMIM6P0DI80 62 aa9.92□□□□□ -0.82
GABRB3-206ENST00000554556 KLKP1Q107X0 134 aa9.9□□□□□ -0.82
GABRB3-206ENST00000554556 TAX1BP3O14907 124 aa9.88□□□□□ -0.83
GABRB3-206ENST00000554556 UBL5Q9BZL1 73 aa9.88□□□□□ -0.83
GABRB3-206ENST00000554556 KRTAP20-1Q3LI63 56 aa9.87□□□□□ -0.83
GABRB3-206ENST00000554556 MUC12Q9UKN1 5478 aa9.85□□□□□ -0.83
GABRB3-206ENST00000554556 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
GABRB3-206ENST00000554556 KRTAP5-9P26371 169 aa9.81□□□□□ -0.84
GABRB3-206ENST00000554556 IMUPQ9GZP8 106 aa9.78□□□□□ -0.84
GABRB3-206ENST00000554556 SPCS1Q9Y6A9 102 aa9.78□□□□□ -0.84
GABRB3-206ENST00000554556 CRIPTQ9P021 101 aa9.76□□□□□ -0.85
GABRB3-206ENST00000554556 SMCPP49901 116 aaPredicted RBP9.75□□□□□ -0.85
GABRB3-206ENST00000554556 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
GABRB3-206ENST00000554556 CYP4F30PQ9H0H9 118 aa9.66□□□□□ -0.86
GABRB3-206ENST00000554556 PRO0461Q9UI25 63 aa9.61□□□□□ -0.87
GABRB3-206ENST00000554556 A0A087WVE0 104 aa9.58□□□□□ -0.88
GABRB3-206ENST00000554556 KMT2DO14686 5537 aa9.58□□□□□ -0.88
GABRB3-206ENST00000554556 LOC101927531A0A1B0GV80 90 aa9.54□□□□□ -0.88
GABRB3-206ENST00000554556 KRTAP2-3P0C7H8 128 aa9.54□□□□□ -0.88
GABRB3-206ENST00000554556 KRTAP2-4Q9BYR9 128 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms