RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 J3QR89 54 aa9.84□□□□□ -0.83
PSEN1-208ENST00000553719 DSCR10P59022 87 aa9.83□□□□□ -0.84
PSEN1-208ENST00000553719 A8MWP4 228 aa9.82□□□□□ -0.84
PSEN1-208ENST00000553719 ACYP1P07311 99 aa9.82□□□□□ -0.84
PSEN1-208ENST00000553719 A0A1B0GVX0 72 aa9.81□□□□□ -0.84
PSEN1-208ENST00000553719 IGKV3D-7A0A0C4DH55 119 aa9.8□□□□□ -0.84
PSEN1-208ENST00000553719 BPY2O14599 106 aa9.79□□□□□ -0.84
PSEN1-208ENST00000553719 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
PSEN1-208ENST00000553719 NDUFB1O75438 58 aa9.78□□□□□ -0.84
PSEN1-208ENST00000553719 IGHV6-1A0A0B4J1U7 121 aa9.77□□□□□ -0.85
PSEN1-208ENST00000553719 KRTAP16-1A8MUX0 517 aa9.76□□□□□ -0.85
PSEN1-208ENST00000553719 PRR15Q8IV56 129 aa9.76□□□□□ -0.85
PSEN1-208ENST00000553719 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
PSEN1-208ENST00000553719 K7EQZ3 153 aa9.75□□□□□ -0.85
PSEN1-208ENST00000553719 LINC00313P59037 77 aa9.74□□□□□ -0.85
PSEN1-208ENST00000553719 RNF213Q63HN8 5207 aa9.73□□□□□ -0.85
PSEN1-208ENST00000553719 C20orf166-AS1Q96NR2 134 aa9.71□□□□□ -0.86
PSEN1-208ENST00000553719 C8orf17Q9NRJ1 99 aa9.71□□□□□ -0.86
PSEN1-208ENST00000553719 K7ERU9 68 aa9.7□□□□□ -0.86
PSEN1-208ENST00000553719 RPL37P61927 97 aaKnown RBP9.7□□□□□ -0.86
PSEN1-208ENST00000553719 CXCL6P80162 114 aa9.7□□□□□ -0.86
PSEN1-208ENST00000553719 A8MUU9 505 aa9.69□□□□□ -0.86
PSEN1-208ENST00000553719 Q75L30 129 aa9.69□□□□□ -0.86
PSEN1-208ENST00000553719 Q8N9L7 120 aa9.69□□□□□ -0.86
PSEN1-208ENST00000553719 MMP24-AS1A0A0U1RRL7 71 aa9.68□□□□□ -0.86
PSEN1-208ENST00000553719 ATP5EP2Q5VTU8 51 aa9.64□□□□□ -0.87
PSEN1-208ENST00000553719 SEC61BP60468 96 aaKnown RBP9.63□□□□□ -0.87
PSEN1-208ENST00000553719 LINC00643Q86TS7 51 aa9.63□□□□□ -0.87
PSEN1-208ENST00000553719 MUC2Q02817 5179 aa9.62□□□□□ -0.87
PSEN1-208ENST00000553719 Q8N9P0 234 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-208ENST00000553719 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
PSEN1-208ENST00000553719 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
PSEN1-208ENST00000553719 hDV103S1A0JD37 113 aa9.58□□□□□ -0.88
PSEN1-208ENST00000553719 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
PSEN1-208ENST00000553719 WFDC13Q8IUB5 93 aa9.56□□□□□ -0.88
PSEN1-208ENST00000553719 MRPL34Q9BQ48 92 aaKnown RBP9.56□□□□□ -0.88
PSEN1-208ENST00000553719 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
PSEN1-208ENST00000553719 HCG22E2RYF7 251 aa9.54□□□□□ -0.88
PSEN1-208ENST00000553719 CASC2Q6XLA1 102 aa9.53□□□□□ -0.88
PSEN1-208ENST00000553719 ATP11AUNQ6ZP68 121 aa9.52□□□□□ -0.89
PSEN1-208ENST00000553719 NDUFS5O43920 106 aa9.5□□□□□ -0.89
PSEN1-208ENST00000553719 ZCCHC13Q8WW36 166 aaKnown RBP9.46□□□□□ -0.9
PSEN1-208ENST00000553719 A0A087WVE0 104 aa9.44□□□□□ -0.9
PSEN1-208ENST00000553719 MT-ATP8P03928 68 aa9.42□□□□□ -0.9
PSEN1-208ENST00000553719 FAT4Q6V0I7 4981 aa9.39□□□□□ -0.91
PSEN1-208ENST00000553719 Q5W150 140 aa9.36□□□□□ -0.91
PSEN1-208ENST00000553719 IMUPQ9GZP8 106 aa9.36□□□□□ -0.91
PSEN1-208ENST00000553719 TP53AIP1Q9HCN2 124 aa9.33□□□□□ -0.92
PSEN1-208ENST00000553719 SCGB1A1P11684 91 aa9.3□□□□□ -0.92
PSEN1-208ENST00000553719 KRTAP19-2Q3LHN2 52 aa9.3□□□□□ -0.92
PSEN1-208ENST00000553719 SPINK7P58062 85 aa9.26□□□□□ -0.93
PSEN1-208ENST00000553719 HRES1P13985 223 aa9.25□□□□□ -0.93
PSEN1-208ENST00000553719 OCR1Q9BZK8 76 aa9.24□□□□□ -0.93
PSEN1-208ENST00000553719 MPLKIPQ8TAP9 179 aa9.23□□□□□ -0.93
PSEN1-208ENST00000553719 FAM236AA0A1B0GUQ0 79 aa9.22□□□□□ -0.93
PSEN1-208ENST00000553719 FAM236BA0A1B0GV22 79 aa9.22□□□□□ -0.93
PSEN1-208ENST00000553719 LCE2CQ5TA81 110 aa9.22□□□□□ -0.93
PSEN1-208ENST00000553719 UQCRQO14949 82 aa9.21□□□□□ -0.94
PSEN1-208ENST00000553719 TRAV22A0A0B4J277 110 aa9.19□□□□□ -0.94
PSEN1-208ENST00000553719 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
PSEN1-208ENST00000553719 A0A0U1RQV1 116 aa9.18□□□□□ -0.94
PSEN1-208ENST00000553719 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
PSEN1-208ENST00000553719 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
PSEN1-208ENST00000553719 FLGP20930 4061 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-208ENST00000553719 H0Y9P7 68 aa9.13□□□□□ -0.95
PSEN1-208ENST00000553719 MP68P56378 58 aa9.1□□□□□ -0.95
PSEN1-208ENST00000553719 ATOX1O00244 68 aa9.09□□□□□ -0.95
PSEN1-208ENST00000553719 SMIM20Q8N5G0 67 aa9.09□□□□□ -0.95
PSEN1-208ENST00000553719 LOC101927531A0A1B0GV80 90 aa9.08□□□□□ -0.96
PSEN1-208ENST00000553719 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
PSEN1-208ENST00000553719 CYP4F30PQ9H0H9 118 aa9.07□□□□□ -0.96
PSEN1-208ENST00000553719 RBM12B-AS1Q9P1G2 102 aa9.07□□□□□ -0.96
PSEN1-208ENST00000553719 C5orf47Q569G3 176 aa9.06□□□□□ -0.96
PSEN1-208ENST00000553719 COX6B2Q6YFQ2 88 aa9.05□□□□□ -0.96
PSEN1-208ENST00000553719 TRAV7A0A075B6U4 112 aa9.04□□□□□ -0.96
PSEN1-208ENST00000553719 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
PSEN1-208ENST00000553719 FAM236DA0A1B0GTK5 79 aa9.03□□□□□ -0.96
PSEN1-208ENST00000553719 FAM236CP0DP71 79 aa9.03□□□□□ -0.96
PSEN1-208ENST00000553719 MT1HP80294 61 aa9.03□□□□□ -0.96
PSEN1-208ENST00000553719 C1orf64Q8NEQ6 169 aa9.02□□□□□ -0.97
PSEN1-208ENST00000553719 H3BPC8 53 aa8.99□□□□□ -0.97
PSEN1-208ENST00000553719 C4orf26Q17RF5 130 aa8.97□□□□□ -0.97
PSEN1-208ENST00000553719 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
PSEN1-208ENST00000553719 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
PSEN1-208ENST00000553719 KLKP1Q107X0 134 aa8.92□□□□□ -0.98
PSEN1-208ENST00000553719 ANAPC13Q9BS18 74 aa8.88□□□□□ -0.99
PSEN1-208ENST00000553719 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
PSEN1-208ENST00000553719 C20orf197Q8N268 126 aa8.86□□□□□ -0.99
PSEN1-208ENST00000553719 SNURFQ9Y675 71 aa8.86□□□□□ -0.99
PSEN1-208ENST00000553719 COX7CP15954 63 aa8.83□□□□□ -1
PSEN1-208ENST00000553719 M0R2T5 61 aa8.77□□□□□ -1.01
PSEN1-208ENST00000553719 KRTAP10-6P60371 365 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-208ENST00000553719 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-208ENST00000553719 A8MUN3 132 aa8.73□□□□□ -1.01
PSEN1-208ENST00000553719 DMAC1Q96GE9 116 aa8.69□□□□□ -1.02
PSEN1-208ENST00000553719 S4R3F8 94 aa8.68□□□□□ -1.02
PSEN1-208ENST00000553719 LCA10Q71F78 164 aa8.67□□□□□ -1.02
PSEN1-208ENST00000553719 CCDC179H3BU77 68 aa8.65□□□□□ -1.02
PSEN1-208ENST00000553719 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
PSEN1-208ENST00000553719 KRTAP9-8Q9BYQ0 159 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms