RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 COL6A3P12111 3177 aa0.84□□□□□ -2.27
NPAS3-212ENST00000552696 NCOR2Q9Y618 2525 aa0.84□□□□□ -2.27
NPAS3-212ENST00000552696 ITPR1Q14643 2758 aa0.84□□□□□ -2.27
NPAS3-212ENST00000552696 BDP1A6H8Y1 2624 aa0.84□□□□□ -2.27
NPAS3-212ENST00000552696 PRUNE2Q8WUY3 3088 aa0.84□□□□□ -2.28
NPAS3-212ENST00000552696 SPG11Q96JI7 2443 aa0.84□□□□□ -2.28
NPAS3-212ENST00000552696 FRYLO94915 3013 aa0.83□□□□□ -2.28
NPAS3-212ENST00000552696 PRRC2CQ9Y520 2896 aaKnown RBP0.83□□□□□ -2.28
NPAS3-212ENST00000552696 M0QZ58 72 aa0.83□□□□□ -2.28
NPAS3-212ENST00000552696 SPINK6Q6UWN8 80 aa0.83□□□□□ -2.28
NPAS3-212ENST00000552696 SONP18583 2426 aaKnown RBP0.83□□□□□ -2.28
NPAS3-212ENST00000552696 TTC28Q96AY4 2481 aa0.82□□□□□ -2.28
NPAS3-212ENST00000552696 ZNF292O60281 2723 aa0.82□□□□□ -2.28
NPAS3-212ENST00000552696 SETD2Q9BYW2 2564 aaPredicted RBP0.82□□□□□ -2.28
NPAS3-212ENST00000552696 A0A096LNI7 61 aa0.82□□□□□ -2.28
NPAS3-212ENST00000552696 A0A096LPF7 62 aa0.82□□□□□ -2.28
NPAS3-212ENST00000552696 H3BNG1 76 aa0.82□□□□□ -2.28
NPAS3-212ENST00000552696 VPS13AQ96RL7 3174 aa0.82□□□□□ -2.28
NPAS3-212ENST00000552696 EPG5Q9HCE0 2579 aa0.82□□□□□ -2.28
NPAS3-212ENST00000552696 LRBAP50851 2863 aa0.82□□□□□ -2.28
NPAS3-212ENST00000552696 ZZEF1O43149 2961 aa0.81□□□□□ -2.28
NPAS3-212ENST00000552696 CACNA1AO00555 2505 aa0.81□□□□□ -2.28
NPAS3-212ENST00000552696 COL6A5A8TX70 2615 aa0.81□□□□□ -2.28
NPAS3-212ENST00000552696 LINC01556Q5JQF7 62 aa0.81□□□□□ -2.28
NPAS3-212ENST00000552696 DEFB124Q8NES8 71 aa0.81□□□□□ -2.28
NPAS3-212ENST00000552696 DMBT1Q9UGM3 2413 aaPredicted RBP0.81□□□□□ -2.28
NPAS3-212ENST00000552696 TRIOO75962 3097 aa0.81□□□□□ -2.28
NPAS3-212ENST00000552696 LRRK2Q5S007 2527 aa0.81□□□□□ -2.28
NPAS3-212ENST00000552696 TLN1Q9Y490 2541 aaKnown RBP0.81□□□□□ -2.28
NPAS3-212ENST00000552696 RANBP2P49792 3224 aaKnown RBP0.81□□□□□ -2.28
NPAS3-212ENST00000552696 GOLGB1Q14789 3259 aaKnown RBP0.81□□□□□ -2.28
NPAS3-212ENST00000552696 AKAP13Q12802 2813 aa0.8□□□□□ -2.28
NPAS3-212ENST00000552696 SPART-AS1P0CW21 52 aa0.8□□□□□ -2.28
NPAS3-212ENST00000552696 HTTP42858 3142 aa0.8□□□□□ -2.28
NPAS3-212ENST00000552696 CHD9Q3L8U1 2897 aa0.8□□□□□ -2.28
NPAS3-212ENST00000552696 USP24Q9UPU5 2620 aa0.8□□□□□ -2.28
NPAS3-212ENST00000552696 CFAP54Q96N23 3096 aa0.8□□□□□ -2.28
NPAS3-212ENST00000552696 CFAP46Q8IYW2 2715 aa0.8□□□□□ -2.28
NPAS3-212ENST00000552696 UTP20O75691 2785 aaKnown RBP0.79□□□□□ -2.28
NPAS3-212ENST00000552696 NF1P21359 2839 aa0.79□□□□□ -2.28
NPAS3-212ENST00000552696 HIVEP3Q5T1R4 2406 aa0.79□□□□□ -2.28
NPAS3-212ENST00000552696 SPTAN1Q13813 2472 aaKnown RBP0.79□□□□□ -2.28
NPAS3-212ENST00000552696 CELSR1Q9NYQ6 3014 aa0.79□□□□□ -2.28
NPAS3-212ENST00000552696 AKAP9Q99996 3911 aa0.79□□□□□ -2.28
NPAS3-212ENST00000552696 KALRNO60229 2985 aa0.79□□□□□ -2.28
NPAS3-212ENST00000552696 CFAP47Q6ZTR5 3102 aa0.79□□□□□ -2.28
NPAS3-212ENST00000552696 USP9YO00507 2555 aaPredicted RBP0.79□□□□□ -2.28
NPAS3-212ENST00000552696 POLQO75417 2590 aa0.78□□□□□ -2.28
NPAS3-212ENST00000552696 UTRNP46939 3433 aa0.78□□□□□ -2.28
NPAS3-212ENST00000552696 CENPEQ02224 2701 aa0.78□□□□□ -2.28
NPAS3-212ENST00000552696 MEGF8Q7Z7M0 2845 aa0.78□□□□□ -2.28
NPAS3-212ENST00000552696 HTN3P15516 51 aa0.78□□□□□ -2.28
NPAS3-212ENST00000552696 FRYQ5TBA9 3013 aa0.78□□□□□ -2.28
NPAS3-212ENST00000552696 USP9XQ93008 2570 aaPredicted RBP0.78□□□□□ -2.28
NPAS3-212ENST00000552696 ATRQ13535 2644 aa0.78□□□□□ -2.29
NPAS3-212ENST00000552696 APCP25054 2843 aa0.78□□□□□ -2.29
NPAS3-212ENST00000552696 NIPBLQ6KC79 2804 aaeCLIP0.78□□□□□ -2.29
NPAS3-212ENST00000552696 PTPN13Q12923 2485 aa0.77□□□□□ -2.29
NPAS3-212ENST00000552696 BOD1L1Q8NFC6 3051 aa0.77□□□□□ -2.29
NPAS3-212ENST00000552696 C5orf42Q9H799 3197 aa0.77□□□□□ -2.29
NPAS3-212ENST00000552696 KRTAP10-4P60372 401 aaPredicted RBP0.77□□□□□ -2.29
NPAS3-212ENST00000552696 TLN2Q9Y4G6 2542 aa0.77□□□□□ -2.29
NPAS3-212ENST00000552696 FLNCQ14315 2725 aa0.77□□□□□ -2.29
NPAS3-212ENST00000552696 CENPFP49454 3210 aa0.77□□□□□ -2.29
NPAS3-212ENST00000552696 DMDP11532 3685 aa0.77□□□□□ -2.29
NPAS3-212ENST00000552696 NBPF19A0A087WUL8 3843 aa0.77□□□□□ -2.29
NPAS3-212ENST00000552696 COL12A1Q99715 3063 aa0.76□□□□□ -2.29
NPAS3-212ENST00000552696 ITPR3Q14573 2671 aa0.76□□□□□ -2.29
NPAS3-212ENST00000552696 ACANP16112 2415 aa0.76□□□□□ -2.29
NPAS3-212ENST00000552696 TNP1P09430 55 aa0.76□□□□□ -2.29
NPAS3-212ENST00000552696 U3KQA8 63 aa0.76□□□□□ -2.29
NPAS3-212ENST00000552696 WDFY4Q6ZS81 3184 aa0.76□□□□□ -2.29
NPAS3-212ENST00000552696 TACC2O95359 2948 aa0.76□□□□□ -2.29
NPAS3-212ENST00000552696 MTORP42345 2549 aa0.76□□□□□ -2.29
NPAS3-212ENST00000552696 SPTBN5Q9NRC6 3674 aaKnown RBP0.76□□□□□ -2.29
NPAS3-212ENST00000552696 ATMQ13315 3056 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 DNAH12Q6ZR08 3092 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 DCHS2Q6V1P9 2916 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 TEX15Q9BXT5 2789 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 DOPEY1Q5JWR5 2465 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 DMXL1Q9Y485 3027 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 DEFB135Q30KP9 77 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 MYO18BQ8IUG5 2567 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 CHD8Q9HCK8 2581 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 MKI67P46013 3256 aaKnown RBP0.75□□□□□ -2.29
NPAS3-212ENST00000552696 LAMA1P25391 3075 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 ZFHX4Q86UP3 3567 aa0.75□□□□□ -2.29
NPAS3-212ENST00000552696 PCNTO95613 3336 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 CELSR3Q9NYQ7 3312 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 VPS13DQ5THJ4 4388 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 PIEZO1Q92508 2521 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 DMXL2Q8TDJ6 3036 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 RPS29P62273 56 aaKnown RBP0.74□□□□□ -2.29
NPAS3-212ENST00000552696 TGP01266 2768 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 ITPR2Q14571 2701 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 NBEAL1Q6ZS30 2694 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 SETXQ7Z333 2677 aaKnown RBP0.74□□□□□ -2.29
NPAS3-212ENST00000552696 LAMA2P24043 3122 aaKnown RBP0.74□□□□□ -2.29
NPAS3-212ENST00000552696 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms