RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
NPAS3-212ENST00000552696 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
NPAS3-212ENST00000552696 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
NPAS3-212ENST00000552696 SENP3Q9H4L4 574 aaPredicted RBP14.46□□□□□ -0.09
NPAS3-212ENST00000552696 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
NPAS3-212ENST00000552696 FOXD1Q16676 465 aa13.42□□□□□ -0.26
NPAS3-212ENST00000552696 ADRA2BP18089 450 aa12.91□□□□□ -0.34
NPAS3-212ENST00000552696 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
NPAS3-212ENST00000552696 PIAS4Q8N2W9 510 aaPredicted RBP12.67□□□□□ -0.38
NPAS3-212ENST00000552696 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
NPAS3-212ENST00000552696 MSH5O43196 834 aa12.37□□□□□ -0.43
NPAS3-212ENST00000552696 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
NPAS3-212ENST00000552696 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
NPAS3-212ENST00000552696 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.53
NPAS3-212ENST00000552696 KCNA4P22459 653 aa11.63□□□□□ -0.55
NPAS3-212ENST00000552696 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
NPAS3-212ENST00000552696 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
NPAS3-212ENST00000552696 DMRT2Q9Y5R5 561 aa11.54□□□□□ -0.56
NPAS3-212ENST00000552696 NPM3O75607 178 aaKnown RBP11.42□□□□□ -0.58
NPAS3-212ENST00000552696 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-212ENST00000552696 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
NPAS3-212ENST00000552696 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
NPAS3-212ENST00000552696 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
NPAS3-212ENST00000552696 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
NPAS3-212ENST00000552696 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
NPAS3-212ENST00000552696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.77□□□□□ -0.69
NPAS3-212ENST00000552696 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
NPAS3-212ENST00000552696 ZBTB22O15209 634 aa10.72□□□□□ -0.69
NPAS3-212ENST00000552696 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
NPAS3-212ENST00000552696 CACNB1Q02641 598 aaPredicted RBP10.68□□□□□ -0.7
NPAS3-212ENST00000552696 CSRNP3Q8WYN3 585 aa10.62□□□□□ -0.71
NPAS3-212ENST00000552696 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
NPAS3-212ENST00000552696 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
NPAS3-212ENST00000552696 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
NPAS3-212ENST00000552696 C1QBPQ07021 282 aaKnown RBP10.46□□□□□ -0.73
NPAS3-212ENST00000552696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.44□□□□□ -0.74
NPAS3-212ENST00000552696 HNRNPUL2Q1KMD3 747 aaKnown RBP10.44□□□□□ -0.74
NPAS3-212ENST00000552696 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
NPAS3-212ENST00000552696 APLP2Q06481 763 aa10.33□□□□□ -0.76
NPAS3-212ENST00000552696 SPINK5Q9NQ38 1064 aaPredicted RBP10.32□□□□□ -0.76
NPAS3-212ENST00000552696 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
NPAS3-212ENST00000552696 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
NPAS3-212ENST00000552696 CAPN15O75808 1086 aa10.27□□□□□ -0.77
NPAS3-212ENST00000552696 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
NPAS3-212ENST00000552696 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.77
NPAS3-212ENST00000552696 ABCB7O75027 752 aa10.09□□□□□ -0.79
NPAS3-212ENST00000552696 DSG3P32926 999 aa10.09□□□□□ -0.79
NPAS3-212ENST00000552696 POLA2Q14181 598 aa10.03□□□□□ -0.8
NPAS3-212ENST00000552696 ZBTB12Q9Y330 459 aaPredicted RBP9.86□□□□□ -0.83
NPAS3-212ENST00000552696 MKRN4PQ13434 485 aaPredicted RBP9.84□□□□□ -0.83
NPAS3-212ENST00000552696 POTEHQ6S545 545 aa9.84□□□□□ -0.83
NPAS3-212ENST00000552696 FBLN2P98095 1184 aa9.83□□□□□ -0.84
NPAS3-212ENST00000552696 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
NPAS3-212ENST00000552696 FKBP8Q14318 412 aa9.62□□□□□ -0.87
NPAS3-212ENST00000552696 SPDYE2BA6NHP3 402 aa9.61□□□□□ -0.87
NPAS3-212ENST00000552696 SPDYE6P0CI01 402 aa9.61□□□□□ -0.87
NPAS3-212ENST00000552696 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
NPAS3-212ENST00000552696 RBM42Q9BTD8 480 aaKnown RBP9.61□□□□□ -0.87
NPAS3-212ENST00000552696 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
NPAS3-212ENST00000552696 ZNF692Q9BU19 519 aaPredicted RBP9.56□□□□□ -0.88
NPAS3-212ENST00000552696 SSUH2Q9Y2M2 353 aa9.54□□□□□ -0.88
NPAS3-212ENST00000552696 AKT1S1Q96B36 256 aa9.49□□□□□ -0.89
NPAS3-212ENST00000552696 PABPN1Q86U42 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPAS3-212ENST00000552696 PROM2Q8N271 834 aa9.43□□□□□ -0.9
NPAS3-212ENST00000552696 REM2Q8IYK8 340 aaPredicted RBP9.4□□□□□ -0.9
NPAS3-212ENST00000552696 SPDYE1Q8NFV5 336 aaPredicted RBP9.32□□□□□ -0.92
NPAS3-212ENST00000552696 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
NPAS3-212ENST00000552696 CLEC11AQ9Y240 323 aa9.29□□□□□ -0.92
NPAS3-212ENST00000552696 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
NPAS3-212ENST00000552696 FBXO3Q9UK99 471 aa9.24□□□□□ -0.93
NPAS3-212ENST00000552696 CHRDL2Q6WN34 429 aa9.23□□□□□ -0.93
NPAS3-212ENST00000552696 PRR29P0C7W0 189 aa9.19□□□□□ -0.94
NPAS3-212ENST00000552696 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
NPAS3-212ENST00000552696 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
NPAS3-212ENST00000552696 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
NPAS3-212ENST00000552696 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
NPAS3-212ENST00000552696 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
NPAS3-212ENST00000552696 CHADLQ6NUI6 762 aa9.08□□□□□ -0.96
NPAS3-212ENST00000552696 MIER1Q8N108 512 aa9.08□□□□□ -0.96
NPAS3-212ENST00000552696 PRKAR2AP13861 404 aaKnown RBP9.07□□□□□ -0.96
NPAS3-212ENST00000552696 PLEKHG5O94827 1062 aa9.04□□□□□ -0.96
NPAS3-212ENST00000552696 IFNLR1Q8IU57 520 aaPredicted RBP9.01□□□□□ -0.97
NPAS3-212ENST00000552696 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
NPAS3-212ENST00000552696 SP7Q8TDD2 431 aaPredicted RBP9□□□□□ -0.97
NPAS3-212ENST00000552696 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
NPAS3-212ENST00000552696 FARP1Q9Y4F1 1045 aaPredicted RBP8.98□□□□□ -0.97
NPAS3-212ENST00000552696 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
NPAS3-212ENST00000552696 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
NPAS3-212ENST00000552696 SPOCK2Q92563 424 aa8.9□□□□□ -0.98
NPAS3-212ENST00000552696 NUBP1P53384 320 aa8.87□□□□□ -0.99
NPAS3-212ENST00000552696 RASEFQ8IZ41 740 aa8.85□□□□□ -0.99
NPAS3-212ENST00000552696 CD44P16070 742 aaKnown RBP8.82□□□□□ -1
NPAS3-212ENST00000552696 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
NPAS3-212ENST00000552696 FAM212AQ96EL1 285 aa8.81□□□□□ -1
NPAS3-212ENST00000552696 HAX1O00165 279 aa8.8□□□□□ -1
NPAS3-212ENST00000552696 TSPYL2Q9H2G4 693 aaPredicted RBP8.8□□□□□ -1
NPAS3-212ENST00000552696 PAK3O75914 559 aaPredicted RBP8.78□□□□□ -1
NPAS3-212ENST00000552696 CIZ1Q9ULV3 898 aaPredicted RBP8.78□□□□□ -1
NPAS3-212ENST00000552696 DCAF8Q5TAQ9 597 aa8.77□□□□□ -1.01
NPAS3-212ENST00000552696 ZRANB1Q9UGI0 708 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms