RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 A0A087X002 238 aa4.31□□□□□ -1.72
SMARCD1-210ENST00000551352 KRTAP13-2Q52LG2 175 aa4.31□□□□□ -1.72
SMARCD1-210ENST00000551352 HRCT1Q6UXD1 115 aa4.31□□□□□ -1.72
SMARCD1-210ENST00000551352 LINC00472Q9H8W2 130 aa4.31□□□□□ -1.72
SMARCD1-210ENST00000551352 CD164Q04900 197 aa4.3□□□□□ -1.72
SMARCD1-210ENST00000551352 SS18L2Q9UHA2 77 aa4.3□□□□□ -1.72
SMARCD1-210ENST00000551352 K7EQZ3 153 aa4.29□□□□□ -1.72
SMARCD1-210ENST00000551352 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
SMARCD1-210ENST00000551352 PRR26Q8N8Z3 221 aa4.29□□□□□ -1.72
SMARCD1-210ENST00000551352 Q96NJ1 140 aa4.29□□□□□ -1.72
SMARCD1-210ENST00000551352 MUC2Q02817 5179 aa4.29□□□□□ -1.72
SMARCD1-210ENST00000551352 J3KT08 172 aa4.28□□□□□ -1.72
SMARCD1-210ENST00000551352 A8MWP4 228 aa4.27□□□□□ -1.73
SMARCD1-210ENST00000551352 FAT4Q6V0I7 4981 aa4.27□□□□□ -1.73
SMARCD1-210ENST00000551352 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
SMARCD1-210ENST00000551352 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
SMARCD1-210ENST00000551352 COX7CP15954 63 aa4.25□□□□□ -1.73
SMARCD1-210ENST00000551352 ASB16-AS1Q495Z4 193 aa4.25□□□□□ -1.73
SMARCD1-210ENST00000551352 PRR15Q8IV56 129 aa4.25□□□□□ -1.73
SMARCD1-210ENST00000551352 SMIM20Q8N5G0 67 aa4.25□□□□□ -1.73
SMARCD1-210ENST00000551352 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
SMARCD1-210ENST00000551352 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
SMARCD1-210ENST00000551352 UQCRQO14949 82 aa4.24□□□□□ -1.73
SMARCD1-210ENST00000551352 Q5XG85 94 aa4.24□□□□□ -1.73
SMARCD1-210ENST00000551352 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
SMARCD1-210ENST00000551352 NDUFB1O75438 58 aa4.23□□□□□ -1.73
SMARCD1-210ENST00000551352 LIMD2Q9BT23 127 aa4.22□□□□□ -1.73
SMARCD1-210ENST00000551352 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
SMARCD1-210ENST00000551352 MMP24-AS1A0A0U1RRL7 71 aa4.21□□□□□ -1.74
SMARCD1-210ENST00000551352 A0A1B0GVX0 72 aa4.21□□□□□ -1.74
SMARCD1-210ENST00000551352 C4orf48Q5BLP8 95 aa4.21□□□□□ -1.74
SMARCD1-210ENST00000551352 WFDC13Q8IUB5 93 aa4.21□□□□□ -1.74
SMARCD1-210ENST00000551352 SPINK1P00995 79 aa4.2□□□□□ -1.74
SMARCD1-210ENST00000551352 CASC2Q6XLA1 102 aa4.2□□□□□ -1.74
SMARCD1-210ENST00000551352 LINC00304Q8N9R0 145 aa4.2□□□□□ -1.74
SMARCD1-210ENST00000551352 C8orf17Q9NRJ1 99 aa4.2□□□□□ -1.74
SMARCD1-210ENST00000551352 RPS29P62273 56 aaKnown RBP4.19□□□□□ -1.74
SMARCD1-210ENST00000551352 C1orf195Q5TG92 126 aa4.19□□□□□ -1.74
SMARCD1-210ENST00000551352 SPAG11AQ6PDA7 123 aa4.19□□□□□ -1.74
SMARCD1-210ENST00000551352 KRTAP9-2Q9BYQ4 174 aa4.19□□□□□ -1.74
SMARCD1-210ENST00000551352 IGHV6-1A0A0B4J1U7 121 aa4.18□□□□□ -1.74
SMARCD1-210ENST00000551352 hDV103S1A0JD37 113 aa4.17□□□□□ -1.74
SMARCD1-210ENST00000551352 PRR4Q16378 134 aa4.17□□□□□ -1.74
SMARCD1-210ENST00000551352 C20orf197Q8N268 126 aa4.17□□□□□ -1.74
SMARCD1-210ENST00000551352 CYSTM1Q9H1C7 97 aa4.16□□□□□ -1.74
SMARCD1-210ENST00000551352 C8orf87E5RJ46 101 aa4.15□□□□□ -1.75
SMARCD1-210ENST00000551352 KLKP1Q107X0 134 aa4.15□□□□□ -1.75
SMARCD1-210ENST00000551352 NOTCH2NLQ7Z3S9 236 aa4.15□□□□□ -1.75
SMARCD1-210ENST00000551352 TMEM254Q8TBM7 123 aa4.15□□□□□ -1.75
SMARCD1-210ENST00000551352 MRPL34Q9BQ48 92 aaKnown RBP4.14□□□□□ -1.75
SMARCD1-210ENST00000551352 A0A0U1RQV1 116 aa4.13□□□□□ -1.75
SMARCD1-210ENST00000551352 C5orf47Q569G3 176 aa4.13□□□□□ -1.75
SMARCD1-210ENST00000551352 SNURFQ9Y675 71 aa4.13□□□□□ -1.75
SMARCD1-210ENST00000551352 RETNLBQ9BQ08 111 aa4.12□□□□□ -1.75
SMARCD1-210ENST00000551352 LINC00313P59037 77 aa4.11□□□□□ -1.75
SMARCD1-210ENST00000551352 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
SMARCD1-210ENST00000551352 H0Y9P7 68 aa4.1□□□□□ -1.75
SMARCD1-210ENST00000551352 H7BZZ5 65 aa4.1□□□□□ -1.75
SMARCD1-210ENST00000551352 NDUFC1O43677 76 aa4.1□□□□□ -1.75
SMARCD1-210ENST00000551352 NDUFS5O43920 106 aa4.1□□□□□ -1.75
SMARCD1-210ENST00000551352 MP68P56378 58 aa4.1□□□□□ -1.75
SMARCD1-210ENST00000551352 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
SMARCD1-210ENST00000551352 ZCCHC13Q8WW36 166 aaKnown RBP4.1□□□□□ -1.75
SMARCD1-210ENST00000551352 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
SMARCD1-210ENST00000551352 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
SMARCD1-210ENST00000551352 TMEM258P61165 79 aa4.09□□□□□ -1.75
SMARCD1-210ENST00000551352 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
SMARCD1-210ENST00000551352 H3BPC8 53 aa4.08□□□□□ -1.76
SMARCD1-210ENST00000551352 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
SMARCD1-210ENST00000551352 XP32Q5T750 250 aa4.07□□□□□ -1.76
SMARCD1-210ENST00000551352 LINC00208Q96KT6 92 aa4.07□□□□□ -1.76
SMARCD1-210ENST00000551352 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
SMARCD1-210ENST00000551352 FAM236DA0A1B0GTK5 79 aa4.05□□□□□ -1.76
SMARCD1-210ENST00000551352 FAM236CP0DP71 79 aa4.05□□□□□ -1.76
SMARCD1-210ENST00000551352 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
SMARCD1-210ENST00000551352 KRTAP13-3Q3SY46 172 aa4.05□□□□□ -1.76
SMARCD1-210ENST00000551352 C1orf64Q8NEQ6 169 aa4.05□□□□□ -1.76
SMARCD1-210ENST00000551352 Q5W150 140 aa4.04□□□□□ -1.76
SMARCD1-210ENST00000551352 LORP23490 312 aaPredicted RBP4.03□□□□□ -1.76
SMARCD1-210ENST00000551352 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.76
SMARCD1-210ENST00000551352 IGLV7-46A0A075B6I9 117 aa4.02□□□□□ -1.77
SMARCD1-210ENST00000551352 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
SMARCD1-210ENST00000551352 FP248Q71RG6 208 aaPredicted RBP4.02□□□□□ -1.77
SMARCD1-210ENST00000551352 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
SMARCD1-210ENST00000551352 LOC101927531A0A1B0GV80 90 aa4.01□□□□□ -1.77
SMARCD1-210ENST00000551352 A8MUU9 505 aa4□□□□□ -1.77
SMARCD1-210ENST00000551352 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
SMARCD1-210ENST00000551352 KRTAP19-2Q3LHN2 52 aa3.98□□□□□ -1.77
SMARCD1-210ENST00000551352 SPANXA2-OT1Q8N9U9 137 aa3.98□□□□□ -1.77
SMARCD1-210ENST00000551352 CYP4F30PQ9H0H9 118 aa3.98□□□□□ -1.77
SMARCD1-210ENST00000551352 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
SMARCD1-210ENST00000551352 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
SMARCD1-210ENST00000551352 PCOTHQ58A44 107 aa3.97□□□□□ -1.77
SMARCD1-210ENST00000551352 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
SMARCD1-210ENST00000551352 Q75L30 129 aa3.96□□□□□ -1.78
SMARCD1-210ENST00000551352 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
SMARCD1-210ENST00000551352 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
SMARCD1-210ENST00000551352 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
SMARCD1-210ENST00000551352 C7orf65Q6ZTY9 151 aa3.92□□□□□ -1.78
SMARCD1-210ENST00000551352 HRES1P13985 223 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms