RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 LINC00313P59037 77 aa6.61□□□□□ -1.35
NPAS3-209ENST00000551008 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
NPAS3-209ENST00000551008 KRTAP9-8Q9BYQ0 159 aa6.59□□□□□ -1.35
NPAS3-209ENST00000551008 MPLKIPQ8TAP9 179 aa6.58□□□□□ -1.36
NPAS3-209ENST00000551008 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
NPAS3-209ENST00000551008 BAALC-AS2P0C853 105 aa6.57□□□□□ -1.36
NPAS3-209ENST00000551008 SCGB1C2P0DMR2 95 aa6.57□□□□□ -1.36
NPAS3-209ENST00000551008 HRES1P13985 223 aa6.57□□□□□ -1.36
NPAS3-209ENST00000551008 RBM3P98179 157 aaKnown RBP6.57□□□□□ -1.36
NPAS3-209ENST00000551008 IGHV6-1A0A0B4J1U7 121 aa6.56□□□□□ -1.36
NPAS3-209ENST00000551008 VPS25Q9BRG1 176 aa6.56□□□□□ -1.36
NPAS3-209ENST00000551008 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
NPAS3-209ENST00000551008 DSCR8Q96T75 97 aa6.53□□□□□ -1.36
NPAS3-209ENST00000551008 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
NPAS3-209ENST00000551008 Q6ZQT0 140 aa6.52□□□□□ -1.37
NPAS3-209ENST00000551008 TRBV20-1A0A075B6N2 111 aa6.51□□□□□ -1.37
NPAS3-209ENST00000551008 C8orf87E5RJ46 101 aa6.51□□□□□ -1.37
NPAS3-209ENST00000551008 LCE1DQ5T752 114 aa6.51□□□□□ -1.37
NPAS3-209ENST00000551008 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
NPAS3-209ENST00000551008 C9JAW5 83 aa6.5□□□□□ -1.37
NPAS3-209ENST00000551008 M0R143 59 aa6.5□□□□□ -1.37
NPAS3-209ENST00000551008 SMIM6P0DI80 62 aa6.49□□□□□ -1.37
NPAS3-209ENST00000551008 ATXN8Q156A1 80 aa6.49□□□□□ -1.37
NPAS3-209ENST00000551008 LOC110117498A0A087WWA1 95 aa6.48□□□□□ -1.37
NPAS3-209ENST00000551008 MT2AP02795 61 aa6.47□□□□□ -1.37
NPAS3-209ENST00000551008 J3KT08 172 aa6.46□□□□□ -1.38
NPAS3-209ENST00000551008 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.38
NPAS3-209ENST00000551008 ZCCHC13Q8WW36 166 aaKnown RBP6.46□□□□□ -1.38
NPAS3-209ENST00000551008 C14orf132Q9NPU4 83 aa6.45□□□□□ -1.38
NPAS3-209ENST00000551008 IGKV3D-7A0A0C4DH55 119 aa6.44□□□□□ -1.38
NPAS3-209ENST00000551008 JMJD7-PLA2G4BH0Y9G9 81 aa6.44□□□□□ -1.38
NPAS3-209ENST00000551008 FAM236DA0A1B0GTK5 79 aa6.43□□□□□ -1.38
NPAS3-209ENST00000551008 A8MWP4 228 aa6.43□□□□□ -1.38
NPAS3-209ENST00000551008 MT1FP04733 61 aa6.43□□□□□ -1.38
NPAS3-209ENST00000551008 FAM236CP0DP71 79 aa6.43□□□□□ -1.38
NPAS3-209ENST00000551008 C21orf62-AS1Q17RA5 79 aa6.43□□□□□ -1.38
NPAS3-209ENST00000551008 C8orf17Q9NRJ1 99 aa6.43□□□□□ -1.38
NPAS3-209ENST00000551008 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
NPAS3-209ENST00000551008 A0A1B0GW54 56 aa6.41□□□□□ -1.38
NPAS3-209ENST00000551008 RBM12B-AS1Q9P1G2 102 aa6.41□□□□□ -1.38
NPAS3-209ENST00000551008 SPINK7P58062 85 aa6.4□□□□□ -1.38
NPAS3-209ENST00000551008 LOC105371267A0A1B0GV96 52 aa6.39□□□□□ -1.39
NPAS3-209ENST00000551008 PDE6GP18545 87 aa6.39□□□□□ -1.39
NPAS3-209ENST00000551008 USH2AO75445 5202 aa6.38□□□□□ -1.39
NPAS3-209ENST00000551008 BATFQ16520 125 aa6.38□□□□□ -1.39
NPAS3-209ENST00000551008 TAX1BP3O14907 124 aa6.37□□□□□ -1.39
NPAS3-209ENST00000551008 NDUFB1O75438 58 aa6.37□□□□□ -1.39
NPAS3-209ENST00000551008 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
NPAS3-209ENST00000551008 MTURNQ8N3F0 131 aa6.37□□□□□ -1.39
NPAS3-209ENST00000551008 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
NPAS3-209ENST00000551008 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
NPAS3-209ENST00000551008 TSTD3H0UI37 97 aa6.36□□□□□ -1.39
NPAS3-209ENST00000551008 LYRM7Q5U5X0 104 aa6.36□□□□□ -1.39
NPAS3-209ENST00000551008 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
NPAS3-209ENST00000551008 SSPOA2VEC9 5147 aa6.36□□□□□ -1.39
NPAS3-209ENST00000551008 Q6ZVQ6 151 aa6.35□□□□□ -1.39
NPAS3-209ENST00000551008 A0A1W2PPM0 123 aa6.33□□□□□ -1.4
NPAS3-209ENST00000551008 H3BT86 120 aa6.32□□□□□ -1.4
NPAS3-209ENST00000551008 K7EQZ3 153 aa6.32□□□□□ -1.4
NPAS3-209ENST00000551008 NREPQ16612 68 aa6.32□□□□□ -1.4
NPAS3-209ENST00000551008 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
NPAS3-209ENST00000551008 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
NPAS3-209ENST00000551008 TMEM254Q8TBM7 123 aa6.3□□□□□ -1.4
NPAS3-209ENST00000551008 MRPL34Q9BQ48 92 aaKnown RBP6.3□□□□□ -1.4
NPAS3-209ENST00000551008 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
NPAS3-209ENST00000551008 hDV103S1A0JD37 113 aa6.25□□□□□ -1.41
NPAS3-209ENST00000551008 Q5W150 140 aa6.24□□□□□ -1.41
NPAS3-209ENST00000551008 Q8N9L7 120 aa6.23□□□□□ -1.41
NPAS3-209ENST00000551008 FCGBPQ9Y6R7 5405 aaPredicted RBP6.22□□□□□ -1.41
NPAS3-209ENST00000551008 BPY2O14599 106 aa6.21□□□□□ -1.42
NPAS3-209ENST00000551008 PRO0461Q9UI25 63 aa6.21□□□□□ -1.42
NPAS3-209ENST00000551008 SPCS1Q9Y6A9 102 aa6.21□□□□□ -1.42
NPAS3-209ENST00000551008 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
NPAS3-209ENST00000551008 NDUFS5O43920 106 aa6.18□□□□□ -1.42
NPAS3-209ENST00000551008 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
NPAS3-209ENST00000551008 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
NPAS3-209ENST00000551008 IGKV2D-30A0A075B6S6 120 aa6.16□□□□□ -1.42
NPAS3-209ENST00000551008 IGKV2-30P06310 120 aa6.16□□□□□ -1.42
NPAS3-209ENST00000551008 LINC00846Q9NV44 126 aa6.16□□□□□ -1.42
NPAS3-209ENST00000551008 CASC2Q6XLA1 102 aa6.15□□□□□ -1.42
NPAS3-209ENST00000551008 HCG22E2RYF7 251 aa6.14□□□□□ -1.43
NPAS3-209ENST00000551008 C7orf65Q6ZTY9 151 aa6.14□□□□□ -1.43
NPAS3-209ENST00000551008 K7EP34 96 aa6.12□□□□□ -1.43
NPAS3-209ENST00000551008 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
NPAS3-209ENST00000551008 COL5A1-AS1Q5SY13 56 aa6.12□□□□□ -1.43
NPAS3-209ENST00000551008 C4orf26Q17RF5 130 aa6.09□□□□□ -1.43
NPAS3-209ENST00000551008 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
NPAS3-209ENST00000551008 CXCL6P80162 114 aa6.07□□□□□ -1.44
NPAS3-209ENST00000551008 UBL5Q9BZL1 73 aa6.06□□□□□ -1.44
NPAS3-209ENST00000551008 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
NPAS3-209ENST00000551008 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
NPAS3-209ENST00000551008 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
NPAS3-209ENST00000551008 ETDBQ3ZM63 59 aa5.99□□□□□ -1.45
NPAS3-209ENST00000551008 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
NPAS3-209ENST00000551008 GTF2H5Q6ZYL4 71 aa5.96□□□□□ -1.46
NPAS3-209ENST00000551008 F8W1H4 67 aa5.95□□□□□ -1.46
NPAS3-209ENST00000551008 PCP4L1A6NKN8 68 aa5.94□□□□□ -1.46
NPAS3-209ENST00000551008 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
NPAS3-209ENST00000551008 LCA10Q71F78 164 aa5.93□□□□□ -1.46
NPAS3-209ENST00000551008 TP53AIP1Q9HCN2 124 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms