RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 ASH1LQ9NR48 2969 aaKnown RBP1.28□□□□□ -2.2
GNPTAB-208ENST00000550718 CCDC168Q8NDH2 2452 aa1.28□□□□□ -2.2
GNPTAB-208ENST00000550718 PRRC2CQ9Y520 2896 aaKnown RBP1.28□□□□□ -2.2
GNPTAB-208ENST00000550718 BDP1A6H8Y1 2624 aa1.27□□□□□ -2.21
GNPTAB-208ENST00000550718 COL6A5A8TX70 2615 aa1.27□□□□□ -2.21
GNPTAB-208ENST00000550718 DEFB135Q30KP9 77 aa1.27□□□□□ -2.21
GNPTAB-208ENST00000550718 TENM2Q9NT68 2774 aa1.27□□□□□ -2.21
GNPTAB-208ENST00000550718 ANKHD1Q8IWZ3 2542 aaKnown RBP1.27□□□□□ -2.21
GNPTAB-208ENST00000550718 OTOGQ6ZRI0 2925 aa1.26□□□□□ -2.21
GNPTAB-208ENST00000550718 CHD8Q9HCK8 2581 aa1.26□□□□□ -2.21
GNPTAB-208ENST00000550718 RP1L1Q8IWN7 2480 aaPredicted RBP1.26□□□□□ -2.21
GNPTAB-208ENST00000550718 WDR87Q6ZQQ6 2873 aa1.26□□□□□ -2.21
GNPTAB-208ENST00000550718 CHD6Q8TD26 2715 aa1.26□□□□□ -2.21
GNPTAB-208ENST00000550718 SONP18583 2426 aaKnown RBP1.25□□□□□ -2.21
GNPTAB-208ENST00000550718 C9orf92A6NGG3 77 aa1.25□□□□□ -2.21
GNPTAB-208ENST00000550718 DEFB133Q30KQ1 61 aa1.25□□□□□ -2.21
GNPTAB-208ENST00000550718 ATRQ13535 2644 aa1.25□□□□□ -2.21
GNPTAB-208ENST00000550718 NCOR2Q9Y618 2525 aa1.25□□□□□ -2.21
GNPTAB-208ENST00000550718 HIVEP3Q5T1R4 2406 aa1.24□□□□□ -2.21
GNPTAB-208ENST00000550718 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
GNPTAB-208ENST00000550718 VWFP04275 2813 aa1.24□□□□□ -2.21
GNPTAB-208ENST00000550718 LRRK2Q5S007 2527 aa1.23□□□□□ -2.21
GNPTAB-208ENST00000550718 ACANP16112 2415 aa1.23□□□□□ -2.21
GNPTAB-208ENST00000550718 AKAP13Q12802 2813 aa1.22□□□□□ -2.21
GNPTAB-208ENST00000550718 POLQO75417 2590 aa1.22□□□□□ -2.21
GNPTAB-208ENST00000550718 M0R2T5 61 aa1.21□□□□□ -2.22
GNPTAB-208ENST00000550718 USP24Q9UPU5 2620 aa1.2□□□□□ -2.22
GNPTAB-208ENST00000550718 CRYBG3Q68DQ2 2970 aa1.2□□□□□ -2.22
GNPTAB-208ENST00000550718 ITPR1Q14643 2758 aa1.2□□□□□ -2.22
GNPTAB-208ENST00000550718 RPS29P62273 56 aaKnown RBP1.2□□□□□ -2.22
GNPTAB-208ENST00000550718 SPG11Q96JI7 2443 aa1.2□□□□□ -2.22
GNPTAB-208ENST00000550718 HTN3P15516 51 aa1.18□□□□□ -2.22
GNPTAB-208ENST00000550718 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
GNPTAB-208ENST00000550718 PTPN13Q12923 2485 aa1.17□□□□□ -2.22
GNPTAB-208ENST00000550718 TNRC18O15417 2968 aaPredicted RBP1.17□□□□□ -2.22
GNPTAB-208ENST00000550718 MTORP42345 2549 aa1.17□□□□□ -2.22
GNPTAB-208ENST00000550718 UTP20O75691 2785 aaKnown RBP1.17□□□□□ -2.22
GNPTAB-208ENST00000550718 CHD9Q3L8U1 2897 aa1.17□□□□□ -2.22
GNPTAB-208ENST00000550718 TENM4Q6N022 2769 aa1.16□□□□□ -2.22
GNPTAB-208ENST00000550718 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
GNPTAB-208ENST00000550718 CACNA1AO00555 2505 aa1.16□□□□□ -2.22
GNPTAB-208ENST00000550718 MAP1AP78559 2803 aaPredicted RBP1.16□□□□□ -2.22
GNPTAB-208ENST00000550718 USP9YO00507 2555 aaPredicted RBP1.15□□□□□ -2.22
GNPTAB-208ENST00000550718 PIEZO1Q92508 2521 aa1.15□□□□□ -2.23
GNPTAB-208ENST00000550718 APCP25054 2843 aa1.14□□□□□ -2.23
GNPTAB-208ENST00000550718 TENM3Q9P273 2699 aa1.13□□□□□ -2.23
GNPTAB-208ENST00000550718 CELSR1Q9NYQ6 3014 aa1.13□□□□□ -2.23
GNPTAB-208ENST00000550718 CFAP46Q8IYW2 2715 aa1.13□□□□□ -2.23
GNPTAB-208ENST00000550718 FLNCQ14315 2725 aa1.13□□□□□ -2.23
GNPTAB-208ENST00000550718 ZFYVE26Q68DK2 2539 aa1.13□□□□□ -2.23
GNPTAB-208ENST00000550718 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
GNPTAB-208ENST00000550718 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
GNPTAB-208ENST00000550718 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
GNPTAB-208ENST00000550718 PRUNE2Q8WUY3 3088 aa1.12□□□□□ -2.23
GNPTAB-208ENST00000550718 NF1P21359 2839 aa1.11□□□□□ -2.23
GNPTAB-208ENST00000550718 FRYLO94915 3013 aa1.11□□□□□ -2.23
GNPTAB-208ENST00000550718 CEP350Q5VT06 3117 aa1.11□□□□□ -2.23
GNPTAB-208ENST00000550718 CSMD3Q7Z407 3707 aa1.11□□□□□ -2.23
GNPTAB-208ENST00000550718 VPS13DQ5THJ4 4388 aa1.11□□□□□ -2.23
GNPTAB-208ENST00000550718 ITPR3Q14573 2671 aa1.1□□□□□ -2.23
GNPTAB-208ENST00000550718 U3KQA8 63 aa1.1□□□□□ -2.23
GNPTAB-208ENST00000550718 DCHS2Q6V1P9 2916 aa1.1□□□□□ -2.23
GNPTAB-208ENST00000550718 SPTAN1Q13813 2472 aaKnown RBP1.1□□□□□ -2.23
GNPTAB-208ENST00000550718 SETXQ7Z333 2677 aaKnown RBP1.1□□□□□ -2.23
GNPTAB-208ENST00000550718 COL6A3P12111 3177 aa1.09□□□□□ -2.24
GNPTAB-208ENST00000550718 DOPEY1Q5JWR5 2465 aa1.09□□□□□ -2.24
GNPTAB-208ENST00000550718 LRBAP50851 2863 aa1.09□□□□□ -2.24
GNPTAB-208ENST00000550718 COL12A1Q99715 3063 aa1.09□□□□□ -2.24
GNPTAB-208ENST00000550718 NBEAQ8NFP9 2946 aa1.09□□□□□ -2.24
GNPTAB-208ENST00000550718 TEX15Q9BXT5 2789 aa1.08□□□□□ -2.24
GNPTAB-208ENST00000550718 FRYQ5TBA9 3013 aa1.08□□□□□ -2.24
GNPTAB-208ENST00000550718 CFAP54Q96N23 3096 aa1.08□□□□□ -2.24
GNPTAB-208ENST00000550718 DEFB4AO15263 64 aa1.08□□□□□ -2.24
GNPTAB-208ENST00000550718 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
GNPTAB-208ENST00000550718 MYO18BQ8IUG5 2567 aa1.07□□□□□ -2.24
GNPTAB-208ENST00000550718 DNAH11Q96DT5 4516 aa1.07□□□□□ -2.24
GNPTAB-208ENST00000550718 CENPEQ02224 2701 aa1.07□□□□□ -2.24
GNPTAB-208ENST00000550718 TLN2Q9Y4G6 2542 aa1.07□□□□□ -2.24
GNPTAB-208ENST00000550718 SMR3AQ99954 134 aa1.07□□□□□ -2.24
GNPTAB-208ENST00000550718 NIPBLQ6KC79 2804 aaeCLIP1.07□□□□□ -2.24
GNPTAB-208ENST00000550718 GCN1Q92616 2671 aaKnown RBP1.07□□□□□ -2.24
GNPTAB-208ENST00000550718 TRIOO75962 3097 aa1.07□□□□□ -2.24
GNPTAB-208ENST00000550718 ACACBO00763 2458 aa1.06□□□□□ -2.24
GNPTAB-208ENST00000550718 TLN1Q9Y490 2541 aaKnown RBP1.06□□□□□ -2.24
GNPTAB-208ENST00000550718 STAB1Q9NY15 2570 aa1.06□□□□□ -2.24
GNPTAB-208ENST00000550718 DNAH12Q6ZR08 3092 aa1.06□□□□□ -2.24
GNPTAB-208ENST00000550718 TGP01266 2768 aa1.05□□□□□ -2.24
GNPTAB-208ENST00000550718 USP9XQ93008 2570 aaPredicted RBP1.05□□□□□ -2.24
GNPTAB-208ENST00000550718 NSD1Q96L73 2696 aaPredicted RBP1.05□□□□□ -2.24
GNPTAB-208ENST00000550718 HTTP42858 3142 aa1.05□□□□□ -2.24
GNPTAB-208ENST00000550718 ZFHX4Q86UP3 3567 aa1.05□□□□□ -2.24
GNPTAB-208ENST00000550718 ATMQ13315 3056 aa1.04□□□□□ -2.24
GNPTAB-208ENST00000550718 ITPR2Q14571 2701 aa1.04□□□□□ -2.24
GNPTAB-208ENST00000550718 AKAP9Q99996 3911 aa1.04□□□□□ -2.24
GNPTAB-208ENST00000550718 COL7A1Q02388 2944 aa1.04□□□□□ -2.24
GNPTAB-208ENST00000550718 NBPF19A0A087WUL8 3843 aa1.04□□□□□ -2.24
GNPTAB-208ENST00000550718 ZZEF1O43149 2961 aa1.04□□□□□ -2.24
GNPTAB-208ENST00000550718 TEP1Q99973 2627 aaKnown RBP1.03□□□□□ -2.24
GNPTAB-208ENST00000550718 BSNQ9UPA5 3926 aa1.02□□□□□ -2.25
GNPTAB-208ENST00000550718 C5orf42Q9H799 3197 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms