RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 A8MWP4 228 aa10.25□□□□□ -0.77
RBFOX1-207ENST00000547338 ATP5EP56381 51 aaPredicted RBP10.25□□□□□ -0.77
RBFOX1-207ENST00000547338 H7BZZ5 65 aa10.24□□□□□ -0.77
RBFOX1-207ENST00000547338 PRR15Q8IV56 129 aa10.24□□□□□ -0.77
RBFOX1-207ENST00000547338 C5orf47Q569G3 176 aa10.23□□□□□ -0.77
RBFOX1-207ENST00000547338 KRTAP10-8P60410 259 aa10.23□□□□□ -0.77
RBFOX1-207ENST00000547338 A0A0U1RQV1 116 aa10.22□□□□□ -0.77
RBFOX1-207ENST00000547338 NDUFB1O75438 58 aa10.22□□□□□ -0.77
RBFOX1-207ENST00000547338 IGLV9-49A0A0B4J1Y8 123 aa10.21□□□□□ -0.78
RBFOX1-207ENST00000547338 FAM236DA0A1B0GTK5 79 aa10.19□□□□□ -0.78
RBFOX1-207ENST00000547338 FAM236CP0DP71 79 aa10.19□□□□□ -0.78
RBFOX1-207ENST00000547338 CD164Q04900 197 aa10.19□□□□□ -0.78
RBFOX1-207ENST00000547338 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
RBFOX1-207ENST00000547338 SNURFQ9Y675 71 aa10.18□□□□□ -0.78
RBFOX1-207ENST00000547338 DEFB116Q30KQ4 102 aa10.16□□□□□ -0.78
RBFOX1-207ENST00000547338 H3BPC8 53 aa10.14□□□□□ -0.79
RBFOX1-207ENST00000547338 KRTAP1-4P0C5Y4 121 aa10.14□□□□□ -0.79
RBFOX1-207ENST00000547338 MOBPQ13875 183 aa10.14□□□□□ -0.79
RBFOX1-207ENST00000547338 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
RBFOX1-207ENST00000547338 SERP1Q9Y6X1 66 aa10.12□□□□□ -0.79
RBFOX1-207ENST00000547338 Q96NJ1 140 aa10.11□□□□□ -0.79
RBFOX1-207ENST00000547338 UBR4Q5T4S7 5183 aa10.11□□□□□ -0.79
RBFOX1-207ENST00000547338 MP68P56378 58 aa10.1□□□□□ -0.79
RBFOX1-207ENST00000547338 FAM229BQ4G0N7 80 aa10.1□□□□□ -0.79
RBFOX1-207ENST00000547338 PRR26Q8N8Z3 221 aa10.1□□□□□ -0.79
RBFOX1-207ENST00000547338 WFDC13Q8IUB5 93 aa10.09□□□□□ -0.79
RBFOX1-207ENST00000547338 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
RBFOX1-207ENST00000547338 ZCCHC13Q8WW36 166 aaKnown RBP10.08□□□□□ -0.8
RBFOX1-207ENST00000547338 TP53AIP1Q9HCN2 124 aa10.07□□□□□ -0.8
RBFOX1-207ENST00000547338 MMP24-AS1A0A0U1RRL7 71 aa10.06□□□□□ -0.8
RBFOX1-207ENST00000547338 hDV103S1A0JD37 113 aa10.04□□□□□ -0.8
RBFOX1-207ENST00000547338 LRP2P98164 4655 aa10.04□□□□□ -0.8
RBFOX1-207ENST00000547338 A0A1B0GVX0 72 aa10.03□□□□□ -0.8
RBFOX1-207ENST00000547338 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.8
RBFOX1-207ENST00000547338 Q5XG85 94 aa10.02□□□□□ -0.81
RBFOX1-207ENST00000547338 HRCT1Q6UXD1 115 aa10.02□□□□□ -0.81
RBFOX1-207ENST00000547338 C8orf17Q9NRJ1 99 aa10.01□□□□□ -0.81
RBFOX1-207ENST00000547338 A0A087X002 238 aa9.97□□□□□ -0.81
RBFOX1-207ENST00000547338 H0Y9P7 68 aa9.96□□□□□ -0.82
RBFOX1-207ENST00000547338 C8orf87E5RJ46 101 aa9.94□□□□□ -0.82
RBFOX1-207ENST00000547338 SMIM26A0A096LP01 95 aa9.93□□□□□ -0.82
RBFOX1-207ENST00000547338 TRAV22A0A0B4J277 110 aa9.93□□□□□ -0.82
RBFOX1-207ENST00000547338 IGHV6-1A0A0B4J1U7 121 aa9.92□□□□□ -0.82
RBFOX1-207ENST00000547338 LINC00208Q96KT6 92 aa9.92□□□□□ -0.82
RBFOX1-207ENST00000547338 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
RBFOX1-207ENST00000547338 CYP4F30PQ9H0H9 118 aa9.92□□□□□ -0.82
RBFOX1-207ENST00000547338 SPANXA2-OT1Q8N9U9 137 aa9.92□□□□□ -0.82
RBFOX1-207ENST00000547338 KRTAP13-2Q52LG2 175 aa9.91□□□□□ -0.82
RBFOX1-207ENST00000547338 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
RBFOX1-207ENST00000547338 LPAP08519 4548 aa9.88□□□□□ -0.83
RBFOX1-207ENST00000547338 C1orf64Q8NEQ6 169 aa9.88□□□□□ -0.83
RBFOX1-207ENST00000547338 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
RBFOX1-207ENST00000547338 RNF213Q63HN8 5207 aa9.83□□□□□ -0.84
RBFOX1-207ENST00000547338 TYMSOSQ8TAI1 123 aa9.82□□□□□ -0.84
RBFOX1-207ENST00000547338 SPINK1P00995 79 aa9.82□□□□□ -0.84
RBFOX1-207ENST00000547338 RPS29P62273 56 aaKnown RBP9.82□□□□□ -0.84
RBFOX1-207ENST00000547338 NDUFS5O43920 106 aa9.8□□□□□ -0.84
RBFOX1-207ENST00000547338 C1orf195Q5TG92 126 aa9.79□□□□□ -0.84
RBFOX1-207ENST00000547338 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
RBFOX1-207ENST00000547338 LINC00313P59037 77 aa9.78□□□□□ -0.84
RBFOX1-207ENST00000547338 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
RBFOX1-207ENST00000547338 LOC101927531A0A1B0GV80 90 aa9.75□□□□□ -0.85
RBFOX1-207ENST00000547338 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
RBFOX1-207ENST00000547338 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
RBFOX1-207ENST00000547338 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
RBFOX1-207ENST00000547338 PRR4Q16378 134 aa9.72□□□□□ -0.85
RBFOX1-207ENST00000547338 FP248Q71RG6 208 aaPredicted RBP9.72□□□□□ -0.85
RBFOX1-207ENST00000547338 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
RBFOX1-207ENST00000547338 RETNLBQ9BQ08 111 aa9.67□□□□□ -0.86
RBFOX1-207ENST00000547338 C4orf26Q17RF5 130 aa9.66□□□□□ -0.86
RBFOX1-207ENST00000547338 V9GYY9 64 aa9.66□□□□□ -0.86
RBFOX1-207ENST00000547338 Q1T7F1 81 aa9.64□□□□□ -0.87
RBFOX1-207ENST00000547338 KRTAP16-1A8MUX0 517 aa9.61□□□□□ -0.87
RBFOX1-207ENST00000547338 Q5W150 140 aa9.6□□□□□ -0.87
RBFOX1-207ENST00000547338 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
RBFOX1-207ENST00000547338 MUC2Q02817 5179 aa9.56□□□□□ -0.88
RBFOX1-207ENST00000547338 MPLKIPQ8TAP9 179 aa9.53□□□□□ -0.88
RBFOX1-207ENST00000547338 TPRXLQ17RH7 258 aa9.52□□□□□ -0.88
RBFOX1-207ENST00000547338 COA5Q86WW8 74 aa9.52□□□□□ -0.88
RBFOX1-207ENST00000547338 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
RBFOX1-207ENST00000547338 MUC17Q685J3 4493 aa9.47□□□□□ -0.89
RBFOX1-207ENST00000547338 ACYP2P14621 99 aa9.46□□□□□ -0.89
RBFOX1-207ENST00000547338 HRES1P13985 223 aa9.42□□□□□ -0.9
RBFOX1-207ENST00000547338 DMAC1Q96GE9 116 aa9.41□□□□□ -0.9
RBFOX1-207ENST00000547338 PRO0628Q9UI54 55 aa9.37□□□□□ -0.91
RBFOX1-207ENST00000547338 C20orf166-AS1Q96NR2 134 aa9.36□□□□□ -0.91
RBFOX1-207ENST00000547338 A8MUU9 505 aa9.36□□□□□ -0.91
RBFOX1-207ENST00000547338 LINC01558Q9Y6Z2 57 aa9.35□□□□□ -0.91
RBFOX1-207ENST00000547338 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
RBFOX1-207ENST00000547338 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
RBFOX1-207ENST00000547338 LCE2DQ5TA82 110 aaPredicted RBP9.3□□□□□ -0.92
RBFOX1-207ENST00000547338 A8MUN3 132 aa9.29□□□□□ -0.92
RBFOX1-207ENST00000547338 PSPHP1O15172 72 aa9.29□□□□□ -0.92
RBFOX1-207ENST00000547338 FAT4Q6V0I7 4981 aa9.29□□□□□ -0.92
RBFOX1-207ENST00000547338 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
RBFOX1-207ENST00000547338 Q5VV11 94 aa9.27□□□□□ -0.93
RBFOX1-207ENST00000547338 Q75L30 129 aa9.26□□□□□ -0.93
RBFOX1-207ENST00000547338 BRK1Q8WUW1 75 aa9.26□□□□□ -0.93
RBFOX1-207ENST00000547338 KRTAP4-1Q9BYQ7 146 aa9.26□□□□□ -0.93
RBFOX1-207ENST00000547338 XP32Q5T750 250 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms