RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 KRTAP12-3P60328 96 aa0.67□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP10-5P60370 271 aa0.67□□□□□ -2.3
CFTR-207ENST00000546407 VWFP04275 2813 aa0.67□□□□□ -2.3
CFTR-207ENST00000546407 MYCBP2O75592 4640 aa0.67□□□□□ -2.3
CFTR-207ENST00000546407 TNRC18O15417 2968 aaPredicted RBP0.66□□□□□ -2.3
CFTR-207ENST00000546407 NF1P21359 2839 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 TENM4Q6N022 2769 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 WDR87Q6ZQQ6 2873 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 COL6A5A8TX70 2615 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 ATRQ13535 2644 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP5-9P26371 169 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP10-4P60372 401 aaPredicted RBP0.66□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP5-11Q6L8G4 156 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 CHD6Q8TD26 2715 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 RP1L1Q8IWN7 2480 aaPredicted RBP0.66□□□□□ -2.3
CFTR-207ENST00000546407 POLQO75417 2590 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 USP24Q9UPU5 2620 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 ZNF292O60281 2723 aa0.66□□□□□ -2.3
CFTR-207ENST00000546407 PTPN13Q12923 2485 aa0.65□□□□□ -2.3
CFTR-207ENST00000546407 UTP20O75691 2785 aaKnown RBP0.65□□□□□ -2.3
CFTR-207ENST00000546407 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
CFTR-207ENST00000546407 PIEZO1Q92508 2521 aa0.65□□□□□ -2.31
CFTR-207ENST00000546407 KRTAP5-4Q6L8H1 288 aa0.65□□□□□ -2.31
CFTR-207ENST00000546407 NBPF19A0A087WUL8 3843 aa0.65□□□□□ -2.31
CFTR-207ENST00000546407 CACNA1AO00555 2505 aa0.65□□□□□ -2.31
CFTR-207ENST00000546407 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.31
CFTR-207ENST00000546407 AKAP9Q99996 3911 aa0.64□□□□□ -2.31
CFTR-207ENST00000546407 SPG11Q96JI7 2443 aa0.64□□□□□ -2.31
CFTR-207ENST00000546407 CEP350Q5VT06 3117 aa0.64□□□□□ -2.31
CFTR-207ENST00000546407 DEFB4AO15263 64 aa0.64□□□□□ -2.31
CFTR-207ENST00000546407 NOTCH2Q04721 2471 aa0.64□□□□□ -2.31
CFTR-207ENST00000546407 NIPBLQ6KC79 2804 aaeCLIP0.64□□□□□ -2.31
CFTR-207ENST00000546407 TEX15Q9BXT5 2789 aa0.63□□□□□ -2.31
CFTR-207ENST00000546407 USP9YO00507 2555 aaPredicted RBP0.63□□□□□ -2.31
CFTR-207ENST00000546407 NBEAQ8NFP9 2946 aa0.63□□□□□ -2.31
CFTR-207ENST00000546407 LCE3EQ5T5B0 92 aa0.63□□□□□ -2.31
CFTR-207ENST00000546407 CHD9Q3L8U1 2897 aa0.63□□□□□ -2.31
CFTR-207ENST00000546407 FRYLO94915 3013 aa0.63□□□□□ -2.31
CFTR-207ENST00000546407 MTORP42345 2549 aa0.63□□□□□ -2.31
CFTR-207ENST00000546407 FLNCQ14315 2725 aa0.62□□□□□ -2.31
CFTR-207ENST00000546407 SRCAPQ6ZRS2 3230 aa0.62□□□□□ -2.31
CFTR-207ENST00000546407 KRTAP5-1Q6L8H4 278 aa0.62□□□□□ -2.31
CFTR-207ENST00000546407 SACSQ9NZJ4 4579 aa0.62□□□□□ -2.31
CFTR-207ENST00000546407 APCP25054 2843 aa0.62□□□□□ -2.31
CFTR-207ENST00000546407 DNAH8Q96JB1 4490 aa0.62□□□□□ -2.31
CFTR-207ENST00000546407 SPTAN1Q13813 2472 aaKnown RBP0.62□□□□□ -2.31
CFTR-207ENST00000546407 TRIOO75962 3097 aa0.61□□□□□ -2.31
CFTR-207ENST00000546407 CFAP46Q8IYW2 2715 aa0.61□□□□□ -2.31
CFTR-207ENST00000546407 ANK2Q01484 3957 aa0.61□□□□□ -2.31
CFTR-207ENST00000546407 CELSR1Q9NYQ6 3014 aa0.61□□□□□ -2.31
CFTR-207ENST00000546407 NSD1Q96L73 2696 aaPredicted RBP0.61□□□□□ -2.31
CFTR-207ENST00000546407 KRTAP4-4Q9BYR3 166 aa0.61□□□□□ -2.31
CFTR-207ENST00000546407 PRUNE2Q8WUY3 3088 aa0.61□□□□□ -2.31
CFTR-207ENST00000546407 TEP1Q99973 2627 aaKnown RBP0.61□□□□□ -2.31
CFTR-207ENST00000546407 DNAH2Q9P225 4427 aa0.61□□□□□ -2.31
CFTR-207ENST00000546407 ZZEF1O43149 2961 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 PRKDCP78527 4128 aaKnown RBP0.6□□□□□ -2.31
CFTR-207ENST00000546407 DOPEY1Q5JWR5 2465 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 COL6A3P12111 3177 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 LCE3AQ5TA76 89 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 LCE3DQ9BYE3 92 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 HTTP42858 3142 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 DNAH3Q8TD57 4116 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 STAB1Q9NY15 2570 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 DYNC2H1Q8NCM8 4307 aaKnown RBP0.6□□□□□ -2.31
CFTR-207ENST00000546407 CMYA5Q8N3K9 4069 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 ANK3Q12955 4377 aaKnown RBP0.6□□□□□ -2.31
CFTR-207ENST00000546407 TGP01266 2768 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 KMT2AQ03164 3969 aa0.6□□□□□ -2.31
CFTR-207ENST00000546407 TLN1Q9Y490 2541 aaKnown RBP0.6□□□□□ -2.31
CFTR-207ENST00000546407 MKI67P46013 3256 aaKnown RBP0.59□□□□□ -2.31
CFTR-207ENST00000546407 TLN2Q9Y4G6 2542 aa0.59□□□□□ -2.31
CFTR-207ENST00000546407 SMR3BP02814 79 aaPredicted RBP0.59□□□□□ -2.31
CFTR-207ENST00000546407 LRBAP50851 2863 aa0.59□□□□□ -2.32
CFTR-207ENST00000546407 ITPR2Q14571 2701 aa0.59□□□□□ -2.32
CFTR-207ENST00000546407 VPS13BQ7Z7G8 4022 aa0.59□□□□□ -2.32
CFTR-207ENST00000546407 CFAP54Q96N23 3096 aa0.59□□□□□ -2.32
CFTR-207ENST00000546407 ITPR3Q14573 2671 aa0.59□□□□□ -2.32
CFTR-207ENST00000546407 FRYQ5TBA9 3013 aa0.59□□□□□ -2.32
CFTR-207ENST00000546407 MYO9AB2RTY4 2548 aa0.59□□□□□ -2.32
CFTR-207ENST00000546407 APOBP04114 4563 aaKnown RBP0.59□□□□□ -2.32
CFTR-207ENST00000546407 BSNQ9UPA5 3926 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 DNAH12Q6ZR08 3092 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 COL12A1Q99715 3063 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 MYO18BQ8IUG5 2567 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 STAB2Q8WWQ8 2551 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 DNAH10Q8IVF4 4471 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 DMDP11532 3685 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 TNXBP22105 4242 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 ATMQ13315 3056 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 HIVEP1P15822 2718 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 CFAP47Q6ZTR5 3102 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 DNAH9Q9NYC9 4486 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 GCN1Q92616 2671 aaKnown RBP0.58□□□□□ -2.32
CFTR-207ENST00000546407 LYSTQ99698 3801 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 CENPEQ02224 2701 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 DCHS2Q6V1P9 2916 aa0.58□□□□□ -2.32
CFTR-207ENST00000546407 DNAH7Q8WXX0 4024 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms