RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 NIPBLQ6KC79 2804 aaeCLIP4.76□□□□□ -1.65
SCN8A-203ENST00000545061 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
SCN8A-203ENST00000545061 KRTAP13-2Q52LG2 175 aa4.74□□□□□ -1.65
SCN8A-203ENST00000545061 KRTAP13-1Q8IUC0 172 aa4.74□□□□□ -1.65
SCN8A-203ENST00000545061 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
SCN8A-203ENST00000545061 CELSR2Q9HCU4 2923 aa4.72□□□□□ -1.65
SCN8A-203ENST00000545061 DMXL2Q8TDJ6 3036 aa4.71□□□□□ -1.66
SCN8A-203ENST00000545061 KRTAP1-3Q8IUG1 177 aa4.68□□□□□ -1.66
SCN8A-203ENST00000545061 WDFY4Q6ZS81 3184 aa4.68□□□□□ -1.66
SCN8A-203ENST00000545061 FLNCQ14315 2725 aa4.68□□□□□ -1.66
SCN8A-203ENST00000545061 TENM2Q9NT68 2774 aa4.67□□□□□ -1.66
SCN8A-203ENST00000545061 PRUNE2Q8WUY3 3088 aa4.67□□□□□ -1.66
SCN8A-203ENST00000545061 KRTAP1-1Q07627 177 aa4.66□□□□□ -1.66
SCN8A-203ENST00000545061 NBEAQ8NFP9 2946 aa4.62□□□□□ -1.67
SCN8A-203ENST00000545061 ZFHX3Q15911 3703 aa4.62□□□□□ -1.67
SCN8A-203ENST00000545061 RANBP2P49792 3224 aaKnown RBP4.61□□□□□ -1.67
SCN8A-203ENST00000545061 DCHS2Q6V1P9 2916 aa4.61□□□□□ -1.67
SCN8A-203ENST00000545061 TNRC18O15417 2968 aaPredicted RBP4.61□□□□□ -1.67
SCN8A-203ENST00000545061 VPS13AQ96RL7 3174 aa4.6□□□□□ -1.67
SCN8A-203ENST00000545061 LAMA1P25391 3075 aa4.6□□□□□ -1.67
SCN8A-203ENST00000545061 XP32Q5T750 250 aa4.58□□□□□ -1.68
SCN8A-203ENST00000545061 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
SCN8A-203ENST00000545061 TPRXLQ17RH7 258 aa4.58□□□□□ -1.68
SCN8A-203ENST00000545061 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
SCN8A-203ENST00000545061 UNC80Q8N2C7 3258 aa4.56□□□□□ -1.68
SCN8A-203ENST00000545061 TACC2O95359 2948 aa4.55□□□□□ -1.68
SCN8A-203ENST00000545061 CELSR1Q9NYQ6 3014 aa4.53□□□□□ -1.68
SCN8A-203ENST00000545061 TENM4Q6N022 2769 aa4.53□□□□□ -1.68
SCN8A-203ENST00000545061 ADGRG4Q8IZF6 3080 aa4.53□□□□□ -1.68
SCN8A-203ENST00000545061 KRTAP7-1Q8IUC3 87 aa4.52□□□□□ -1.69
SCN8A-203ENST00000545061 XIRP2A4UGR9 3374 aa4.52□□□□□ -1.69
SCN8A-203ENST00000545061 ZZEF1O43149 2961 aa4.49□□□□□ -1.69
SCN8A-203ENST00000545061 KRTAP12-1P59990 96 aa4.48□□□□□ -1.69
SCN8A-203ENST00000545061 BOD1L1Q8NFC6 3051 aa4.47□□□□□ -1.69
SCN8A-203ENST00000545061 DMXL1Q9Y485 3027 aa4.46□□□□□ -1.7
SCN8A-203ENST00000545061 A0A1B0GVY2 172 aa4.45□□□□□ -1.7
SCN8A-203ENST00000545061 OTOGQ6ZRI0 2925 aa4.45□□□□□ -1.7
SCN8A-203ENST00000545061 ZANQ9Y493 2812 aa4.42□□□□□ -1.7
SCN8A-203ENST00000545061 ATMQ13315 3056 aa4.41□□□□□ -1.7
SCN8A-203ENST00000545061 HTTP42858 3142 aa4.4□□□□□ -1.7
SCN8A-203ENST00000545061 CELSR3Q9NYQ7 3312 aa4.38□□□□□ -1.71
SCN8A-203ENST00000545061 COL7A1Q02388 2944 aa4.37□□□□□ -1.71
SCN8A-203ENST00000545061 VWFP04275 2813 aa4.37□□□□□ -1.71
SCN8A-203ENST00000545061 HRNRQ86YZ3 2850 aaPredicted RBP4.37□□□□□ -1.71
SCN8A-203ENST00000545061 DNAH14Q0VDD8 3507 aa4.35□□□□□ -1.71
SCN8A-203ENST00000545061 KRTAP13-3Q3SY46 172 aa4.35□□□□□ -1.71
SCN8A-203ENST00000545061 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.72
SCN8A-203ENST00000545061 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
SCN8A-203ENST00000545061 USP34Q70CQ2 3546 aa4.31□□□□□ -1.72
SCN8A-203ENST00000545061 MXRA5Q9NR99 2828 aa4.31□□□□□ -1.72
SCN8A-203ENST00000545061 MEGF8Q7Z7M0 2845 aa4.3□□□□□ -1.72
SCN8A-203ENST00000545061 COL6A3P12111 3177 aa4.25□□□□□ -1.73
SCN8A-203ENST00000545061 MKI67P46013 3256 aaKnown RBP4.25□□□□□ -1.73
SCN8A-203ENST00000545061 ZFHX4Q86UP3 3567 aa4.24□□□□□ -1.73
SCN8A-203ENST00000545061 SZT2Q5T011 3432 aa4.24□□□□□ -1.73
SCN8A-203ENST00000545061 FBN2P35556 2912 aa4.22□□□□□ -1.73
SCN8A-203ENST00000545061 BRCA2P51587 3418 aa4.22□□□□□ -1.73
SCN8A-203ENST00000545061 LAMA3Q16787 3333 aa4.22□□□□□ -1.73
SCN8A-203ENST00000545061 CFAP47Q6ZTR5 3102 aa4.21□□□□□ -1.74
SCN8A-203ENST00000545061 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
SCN8A-203ENST00000545061 VCANP13611 3396 aa4.15□□□□□ -1.75
SCN8A-203ENST00000545061 SPEGQ15772 3267 aa4.14□□□□□ -1.75
SCN8A-203ENST00000545061 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
SCN8A-203ENST00000545061 SPTBN5Q9NRC6 3674 aaKnown RBP4.1□□□□□ -1.75
SCN8A-203ENST00000545061 CDH23Q9H251 3354 aa4.09□□□□□ -1.75
SCN8A-203ENST00000545061 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
SCN8A-203ENST00000545061 NBPF19A0A087WUL8 3843 aa4.04□□□□□ -1.76
SCN8A-203ENST00000545061 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
SCN8A-203ENST00000545061 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
SCN8A-203ENST00000545061 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
SCN8A-203ENST00000545061 FBN3Q75N90 2809 aa3.99□□□□□ -1.77
SCN8A-203ENST00000545061 KRTAP21-3Q3LHN1 58 aa3.98□□□□□ -1.77
SCN8A-203ENST00000545061 LOC400499M0QZD8 3231 aa3.96□□□□□ -1.78
SCN8A-203ENST00000545061 MT3P25713 68 aa3.93□□□□□ -1.78
SCN8A-203ENST00000545061 DMDP11532 3685 aa3.9□□□□□ -1.78
SCN8A-203ENST00000545061 ASPMQ8IZT6 3477 aa3.9□□□□□ -1.78
SCN8A-203ENST00000545061 WDFY3Q8IZQ1 3526 aa3.87□□□□□ -1.79
SCN8A-203ENST00000545061 SPENQ96T58 3664 aaKnown RBP3.87□□□□□ -1.79
SCN8A-203ENST00000545061 SMG1Q96Q15 3661 aaKnown RBP3.86□□□□□ -1.79
SCN8A-203ENST00000545061 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
SCN8A-203ENST00000545061 MYO15AQ9UKN7 3530 aa3.84□□□□□ -1.79
SCN8A-203ENST00000545061 FBN1P35555 2871 aaKnown RBP3.83□□□□□ -1.8
SCN8A-203ENST00000545061 LAMA5O15230 3695 aa3.83□□□□□ -1.8
SCN8A-203ENST00000545061 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
SCN8A-203ENST00000545061 KRTAP3-2Q9BYR7 98 aa3.82□□□□□ -1.8
SCN8A-203ENST00000545061 DCHS1Q96JQ0 3298 aa3.81□□□□□ -1.8
SCN8A-203ENST00000545061 EYSQ5T1H1 3165 aa3.81□□□□□ -1.8
SCN8A-203ENST00000545061 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
SCN8A-203ENST00000545061 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
SCN8A-203ENST00000545061 RELNP78509 3460 aa3.79□□□□□ -1.8
SCN8A-203ENST00000545061 AKAP9Q99996 3911 aa3.76□□□□□ -1.81
SCN8A-203ENST00000545061 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
SCN8A-203ENST00000545061 CSMD1Q96PZ7 3565 aa3.68□□□□□ -1.82
SCN8A-203ENST00000545061 VPS13CQ709C8 3753 aa3.66□□□□□ -1.82
SCN8A-203ENST00000545061 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
SCN8A-203ENST00000545061 CSMD3Q7Z407 3707 aa3.6□□□□□ -1.83
SCN8A-203ENST00000545061 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
SCN8A-203ENST00000545061 TRRAPQ9Y4A5 3859 aa3.56□□□□□ -1.84
SCN8A-203ENST00000545061 CMYA5Q8N3K9 4069 aa3.55□□□□□ -1.84
SCN8A-203ENST00000545061 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms