RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 DMXL2Q8TDJ6 3036 aa4.47□□□□□ -1.69
ABCA13-207ENST00000544596 FREM2Q5SZK8 3169 aa4.47□□□□□ -1.69
ABCA13-207ENST00000544596 BOD1L1Q8NFC6 3051 aa4.47□□□□□ -1.69
ABCA13-207ENST00000544596 IGSF10Q6WRI0 2623 aa4.47□□□□□ -1.69
ABCA13-207ENST00000544596 Q6ZRN7 208 aaPredicted RBP4.45□□□□□ -1.7
ABCA13-207ENST00000544596 FRYQ5TBA9 3013 aa4.44□□□□□ -1.7
ABCA13-207ENST00000544596 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
ABCA13-207ENST00000544596 DMDP11532 3685 aa4.41□□□□□ -1.7
ABCA13-207ENST00000544596 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
ABCA13-207ENST00000544596 GCN1Q92616 2671 aaKnown RBP4.4□□□□□ -1.71
ABCA13-207ENST00000544596 MAP1AP78559 2803 aaPredicted RBP4.38□□□□□ -1.71
ABCA13-207ENST00000544596 LRBAP50851 2863 aa4.38□□□□□ -1.71
ABCA13-207ENST00000544596 LOC400499M0QZD8 3231 aa4.37□□□□□ -1.71
ABCA13-207ENST00000544596 WDFY3Q8IZQ1 3526 aa4.36□□□□□ -1.71
ABCA13-207ENST00000544596 FLNCQ14315 2725 aa4.36□□□□□ -1.71
ABCA13-207ENST00000544596 ATMQ13315 3056 aa4.36□□□□□ -1.71
ABCA13-207ENST00000544596 ITPR2Q14571 2701 aa4.34□□□□□ -1.71
ABCA13-207ENST00000544596 NSD1Q96L73 2696 aaPredicted RBP4.34□□□□□ -1.72
ABCA13-207ENST00000544596 KRTAP7-1Q8IUC3 87 aa4.34□□□□□ -1.72
ABCA13-207ENST00000544596 XP32Q5T750 250 aa4.33□□□□□ -1.72
ABCA13-207ENST00000544596 MUC3AQ02505 3323 aa4.33□□□□□ -1.72
ABCA13-207ENST00000544596 ADGRG4Q8IZF6 3080 aa4.33□□□□□ -1.72
ABCA13-207ENST00000544596 ASPMQ8IZT6 3477 aa4.33□□□□□ -1.72
ABCA13-207ENST00000544596 COL12A1Q99715 3063 aa4.32□□□□□ -1.72
ABCA13-207ENST00000544596 LAMA5O15230 3695 aa4.32□□□□□ -1.72
ABCA13-207ENST00000544596 NBEAL2Q6ZNJ1 2754 aa4.31□□□□□ -1.72
ABCA13-207ENST00000544596 KRTAP21-3Q3LHN1 58 aa4.31□□□□□ -1.72
ABCA13-207ENST00000544596 UTP20O75691 2785 aaKnown RBP4.31□□□□□ -1.72
ABCA13-207ENST00000544596 NBEAQ8NFP9 2946 aa4.3□□□□□ -1.72
ABCA13-207ENST00000544596 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
ABCA13-207ENST00000544596 CFAP47Q6ZTR5 3102 aa4.28□□□□□ -1.72
ABCA13-207ENST00000544596 KALRNO60229 2985 aa4.26□□□□□ -1.73
ABCA13-207ENST00000544596 CRYBG3Q68DQ2 2970 aa4.22□□□□□ -1.73
ABCA13-207ENST00000544596 RELNP78509 3460 aa4.21□□□□□ -1.73
ABCA13-207ENST00000544596 H0YAA0 97 aa4.21□□□□□ -1.73
ABCA13-207ENST00000544596 DCHS1Q96JQ0 3298 aa4.21□□□□□ -1.73
ABCA13-207ENST00000544596 ZZEF1O43149 2961 aa4.21□□□□□ -1.73
ABCA13-207ENST00000544596 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
ABCA13-207ENST00000544596 NBPF19A0A087WUL8 3843 aa4.21□□□□□ -1.74
ABCA13-207ENST00000544596 UBR5O95071 2799 aaPredicted RBP4.21□□□□□ -1.74
ABCA13-207ENST00000544596 APCP25054 2843 aa4.19□□□□□ -1.74
ABCA13-207ENST00000544596 ZFHX4Q86UP3 3567 aa4.18□□□□□ -1.74
ABCA13-207ENST00000544596 TACC2O95359 2948 aa4.18□□□□□ -1.74
ABCA13-207ENST00000544596 ITPR1Q14643 2758 aa4.18□□□□□ -1.74
ABCA13-207ENST00000544596 KRTAP1-4P0C5Y4 121 aa4.15□□□□□ -1.75
ABCA13-207ENST00000544596 HRNRQ86YZ3 2850 aaPredicted RBP4.15□□□□□ -1.75
ABCA13-207ENST00000544596 HIVEP1P15822 2718 aa4.14□□□□□ -1.75
ABCA13-207ENST00000544596 CELSR2Q9HCU4 2923 aa4.14□□□□□ -1.75
ABCA13-207ENST00000544596 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
ABCA13-207ENST00000544596 BSNQ9UPA5 3926 aa4.12□□□□□ -1.75
ABCA13-207ENST00000544596 SPENQ96T58 3664 aaKnown RBP4.12□□□□□ -1.75
ABCA13-207ENST00000544596 KRTAP13-3Q3SY46 172 aa4.09□□□□□ -1.75
ABCA13-207ENST00000544596 SMG1Q96Q15 3661 aaKnown RBP4.09□□□□□ -1.75
ABCA13-207ENST00000544596 ZANQ9Y493 2812 aa4.08□□□□□ -1.76
ABCA13-207ENST00000544596 ASH1LQ9NR48 2969 aaKnown RBP4.08□□□□□ -1.76
ABCA13-207ENST00000544596 TENM4Q6N022 2769 aa4.08□□□□□ -1.76
ABCA13-207ENST00000544596 DCHS2Q6V1P9 2916 aa4.07□□□□□ -1.76
ABCA13-207ENST00000544596 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
ABCA13-207ENST00000544596 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
ABCA13-207ENST00000544596 NIPBLQ6KC79 2804 aaeCLIP4□□□□□ -1.77
ABCA13-207ENST00000544596 CSMD1Q96PZ7 3565 aa4□□□□□ -1.77
ABCA13-207ENST00000544596 FBN2P35556 2912 aa3.99□□□□□ -1.77
ABCA13-207ENST00000544596 NF1P21359 2839 aa3.98□□□□□ -1.77
ABCA13-207ENST00000544596 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
ABCA13-207ENST00000544596 ZFHX3Q15911 3703 aa3.97□□□□□ -1.77
ABCA13-207ENST00000544596 TENM1Q9UKZ4 2725 aa3.96□□□□□ -1.78
ABCA13-207ENST00000544596 TENM3Q9P273 2699 aa3.96□□□□□ -1.78
ABCA13-207ENST00000544596 SVEP1Q4LDE5 3571 aa3.95□□□□□ -1.78
ABCA13-207ENST00000544596 PDZD2O15018 2839 aa3.93□□□□□ -1.78
ABCA13-207ENST00000544596 MXRA5Q9NR99 2828 aa3.92□□□□□ -1.78
ABCA13-207ENST00000544596 CELSR1Q9NYQ6 3014 aa3.9□□□□□ -1.79
ABCA13-207ENST00000544596 CSMD2Q7Z408 3487 aa3.89□□□□□ -1.79
ABCA13-207ENST00000544596 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
ABCA13-207ENST00000544596 VPS13CQ709C8 3753 aa3.88□□□□□ -1.79
ABCA13-207ENST00000544596 TENM2Q9NT68 2774 aa3.88□□□□□ -1.79
ABCA13-207ENST00000544596 ANK3Q12955 4377 aaKnown RBP3.85□□□□□ -1.79
ABCA13-207ENST00000544596 TGP01266 2768 aa3.85□□□□□ -1.79
ABCA13-207ENST00000544596 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
ABCA13-207ENST00000544596 INE1O15225 51 aa3.79□□□□□ -1.8
ABCA13-207ENST00000544596 TRRAPQ9Y4A5 3859 aa3.79□□□□□ -1.8
ABCA13-207ENST00000544596 ZNF469Q96JG9 3925 aaPredicted RBP3.79□□□□□ -1.8
ABCA13-207ENST00000544596 AKAP9Q99996 3911 aa3.78□□□□□ -1.8
ABCA13-207ENST00000544596 PKD1L1Q8TDX9 2849 aa3.77□□□□□ -1.81
ABCA13-207ENST00000544596 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
ABCA13-207ENST00000544596 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
ABCA13-207ENST00000544596 VWFP04275 2813 aa3.74□□□□□ -1.81
ABCA13-207ENST00000544596 CUBNO60494 3623 aa3.74□□□□□ -1.81
ABCA13-207ENST00000544596 FBN1P35555 2871 aaKnown RBP3.71□□□□□ -1.82
ABCA13-207ENST00000544596 KRTAP3-1Q9BYR8 98 aa3.68□□□□□ -1.82
ABCA13-207ENST00000544596 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
ABCA13-207ENST00000544596 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.82
ABCA13-207ENST00000544596 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
ABCA13-207ENST00000544596 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
ABCA13-207ENST00000544596 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
ABCA13-207ENST00000544596 FBN3Q75N90 2809 aa3.58□□□□□ -1.84
ABCA13-207ENST00000544596 HUWE1Q7Z6Z7 4374 aaKnown RBP3.57□□□□□ -1.84
ABCA13-207ENST00000544596 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
ABCA13-207ENST00000544596 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
ABCA13-207ENST00000544596 COL7A1Q02388 2944 aa3.49□□□□□ -1.85
ABCA13-207ENST00000544596 CMYA5Q8N3K9 4069 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms