RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 VPS25Q9BRG1 176 aa13.52□□□□□ -0.25
PDCD2-211ENST00000544336 A0A1B0GVX0 72 aa13.48□□□□□ -0.25
PDCD2-211ENST00000544336 COX6CP09669 75 aa13.48□□□□□ -0.25
PDCD2-211ENST00000544336 C8orf87E5RJ46 101 aa13.47□□□□□ -0.25
PDCD2-211ENST00000544336 MTURNQ8N3F0 131 aa13.46□□□□□ -0.25
PDCD2-211ENST00000544336 HSD52Q0P140 79 aa13.45□□□□□ -0.26
PDCD2-211ENST00000544336 UBE2V1Q13404 147 aa13.45□□□□□ -0.26
PDCD2-211ENST00000544336 ZCCHC13Q8WW36 166 aaKnown RBP13.42□□□□□ -0.26
PDCD2-211ENST00000544336 SPINK7P58062 85 aa13.39□□□□□ -0.27
PDCD2-211ENST00000544336 RBM3P98179 157 aaKnown RBP13.38□□□□□ -0.27
PDCD2-211ENST00000544336 DSCR8Q96T75 97 aa13.36□□□□□ -0.27
PDCD2-211ENST00000544336 SCGB1C2P0DMR2 95 aa13.31□□□□□ -0.28
PDCD2-211ENST00000544336 J3KT08 172 aa13.3□□□□□ -0.28
PDCD2-211ENST00000544336 PYY3Q5JQD4 70 aa13.28□□□□□ -0.28
PDCD2-211ENST00000544336 C9JAW5 83 aa13.26□□□□□ -0.29
PDCD2-211ENST00000544336 NDUFB1O75438 58 aa13.24□□□□□ -0.29
PDCD2-211ENST00000544336 LYRM7Q5U5X0 104 aa13.24□□□□□ -0.29
PDCD2-211ENST00000544336 WFDC13Q8IUB5 93 aa13.24□□□□□ -0.29
PDCD2-211ENST00000544336 Q8N9P0 234 aaPredicted RBP13.24□□□□□ -0.29
PDCD2-211ENST00000544336 BAALC-AS2P0C853 105 aa13.23□□□□□ -0.29
PDCD2-211ENST00000544336 Q6ZQT0 140 aa13.23□□□□□ -0.29
PDCD2-211ENST00000544336 LINC00846Q9NV44 126 aa13.22□□□□□ -0.29
PDCD2-211ENST00000544336 C21orf62-AS1Q17RA5 79 aa13.21□□□□□ -0.29
PDCD2-211ENST00000544336 A8MWP4 228 aa13.2□□□□□ -0.3
PDCD2-211ENST00000544336 KRTAP19-6Q3LI70 58 aa13.19□□□□□ -0.3
PDCD2-211ENST00000544336 C8orf17Q9NRJ1 99 aa13.19□□□□□ -0.3
PDCD2-211ENST00000544336 UQCR10Q9UDW1 63 aa13.18□□□□□ -0.3
PDCD2-211ENST00000544336 MACF1Q9UPN3 7388 aaKnown RBP13.17□□□□□ -0.3
PDCD2-211ENST00000544336 SYNE2Q8WXH0 6885 aaKnown RBP13.1□□□□□ -0.31
PDCD2-211ENST00000544336 IGKV3D-7A0A0C4DH55 119 aa13.1□□□□□ -0.31
PDCD2-211ENST00000544336 Q6ZVQ6 151 aa13.08□□□□□ -0.32
PDCD2-211ENST00000544336 JMJD7-PLA2G4BH0Y9G9 81 aa13.02□□□□□ -0.33
PDCD2-211ENST00000544336 LOC110117498A0A087WWA1 95 aa13.01□□□□□ -0.33
PDCD2-211ENST00000544336 NAA38Q9BRA0 125 aaKnown RBP13.01□□□□□ -0.33
PDCD2-211ENST00000544336 ATXN8Q156A1 80 aa13□□□□□ -0.33
PDCD2-211ENST00000544336 A0A1B0GW54 56 aa12.98□□□□□ -0.33
PDCD2-211ENST00000544336 PRR15Q8IV56 129 aa12.98□□□□□ -0.33
PDCD2-211ENST00000544336 C14orf132Q9NPU4 83 aa12.98□□□□□ -0.33
PDCD2-211ENST00000544336 H1FX-AS1Q4G0G2 97 aa12.95□□□□□ -0.34
PDCD2-211ENST00000544336 MRPL34Q9BQ48 92 aaKnown RBP12.94□□□□□ -0.34
PDCD2-211ENST00000544336 MMP24-AS1A0A0U1RRL7 71 aa12.93□□□□□ -0.34
PDCD2-211ENST00000544336 PDE6GP18545 87 aa12.93□□□□□ -0.34
PDCD2-211ENST00000544336 TMEM254Q8TBM7 123 aa12.93□□□□□ -0.34
PDCD2-211ENST00000544336 NREPQ16612 68 aa12.92□□□□□ -0.34
PDCD2-211ENST00000544336 TMA7Q9Y2S6 64 aaKnown RBP12.9□□□□□ -0.34
PDCD2-211ENST00000544336 NDUFS5O43920 106 aa12.89□□□□□ -0.35
PDCD2-211ENST00000544336 hDV103S1A0JD37 113 aa12.84□□□□□ -0.35
PDCD2-211ENST00000544336 IGKV2D-30A0A075B6S6 120 aa12.82□□□□□ -0.36
PDCD2-211ENST00000544336 K7EQZ3 153 aa12.82□□□□□ -0.36
PDCD2-211ENST00000544336 M0R143 59 aa12.82□□□□□ -0.36
PDCD2-211ENST00000544336 IGKV2-30P06310 120 aa12.82□□□□□ -0.36
PDCD2-211ENST00000544336 KRTAP6-3Q3LI67 103 aa12.81□□□□□ -0.36
PDCD2-211ENST00000544336 Q5W150 140 aa12.73□□□□□ -0.37
PDCD2-211ENST00000544336 C7orf65Q6ZTY9 151 aa12.73□□□□□ -0.37
PDCD2-211ENST00000544336 BPY2O14599 106 aa12.65□□□□□ -0.38
PDCD2-211ENST00000544336 C4orf26Q17RF5 130 aa12.63□□□□□ -0.39
PDCD2-211ENST00000544336 HCG22E2RYF7 251 aa12.58□□□□□ -0.4
PDCD2-211ENST00000544336 Q8N9L7 120 aa12.58□□□□□ -0.4
PDCD2-211ENST00000544336 BATFQ16520 125 aa12.57□□□□□ -0.4
PDCD2-211ENST00000544336 CASC2Q6XLA1 102 aa12.57□□□□□ -0.4
PDCD2-211ENST00000544336 C5orf47Q569G3 176 aa12.56□□□□□ -0.4
PDCD2-211ENST00000544336 FAM236AA0A1B0GUQ0 79 aa12.55□□□□□ -0.4
PDCD2-211ENST00000544336 FAM236BA0A1B0GV22 79 aa12.55□□□□□ -0.4
PDCD2-211ENST00000544336 H3BT86 120 aa12.53□□□□□ -0.4
PDCD2-211ENST00000544336 TSTD3H0UI37 97 aa12.49□□□□□ -0.41
PDCD2-211ENST00000544336 A6NN06 94 aa12.48□□□□□ -0.41
PDCD2-211ENST00000544336 CXCL6P80162 114 aa12.45□□□□□ -0.42
PDCD2-211ENST00000544336 MT1BP07438 61 aa12.43□□□□□ -0.42
PDCD2-211ENST00000544336 S4R3F8 94 aa12.42□□□□□ -0.42
PDCD2-211ENST00000544336 C9orf118A6NHY6 69 aa12.41□□□□□ -0.42
PDCD2-211ENST00000544336 Q5VV11 94 aa12.4□□□□□ -0.42
PDCD2-211ENST00000544336 KRTAP3-1Q9BYR8 98 aa12.4□□□□□ -0.42
PDCD2-211ENST00000544336 A0A1W2PPM0 123 aa12.39□□□□□ -0.43
PDCD2-211ENST00000544336 SMIM6P0DI80 62 aa12.38□□□□□ -0.43
PDCD2-211ENST00000544336 TAX1BP3O14907 124 aa12.35□□□□□ -0.43
PDCD2-211ENST00000544336 CSAG1Q6PB30 78 aa12.34□□□□□ -0.43
PDCD2-211ENST00000544336 NEBP20929 6669 aa12.33□□□□□ -0.44
PDCD2-211ENST00000544336 LOC105371267A0A1B0GV96 52 aa12.32□□□□□ -0.44
PDCD2-211ENST00000544336 LCA10Q71F78 164 aa12.32□□□□□ -0.44
PDCD2-211ENST00000544336 C1orf64Q8NEQ6 169 aa12.32□□□□□ -0.44
PDCD2-211ENST00000544336 KRTAP19-8Q3LI54 63 aa12.31□□□□□ -0.44
PDCD2-211ENST00000544336 SPRR2GQ9BYE4 73 aa12.31□□□□□ -0.44
PDCD2-211ENST00000544336 MUC12Q9UKN1 5478 aa12.24□□□□□ -0.45
PDCD2-211ENST00000544336 KRTAP10-5P60370 271 aa12.22□□□□□ -0.45
PDCD2-211ENST00000544336 UBL5Q9BZL1 73 aa12.21□□□□□ -0.45
PDCD2-211ENST00000544336 SMCPP49901 116 aaPredicted RBP12.2□□□□□ -0.46
PDCD2-211ENST00000544336 SPCS1Q9Y6A9 102 aa12.2□□□□□ -0.46
PDCD2-211ENST00000544336 KLKP1Q107X0 134 aa12.18□□□□□ -0.46
PDCD2-211ENST00000544336 KRTAP20-1Q3LI63 56 aa12.11□□□□□ -0.47
PDCD2-211ENST00000544336 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
PDCD2-211ENST00000544336 TP53AIP1Q9HCN2 124 aa12.07□□□□□ -0.48
PDCD2-211ENST00000544336 IMUPQ9GZP8 106 aa12.04□□□□□ -0.48
PDCD2-211ENST00000544336 KRTAP5-9P26371 169 aa12.03□□□□□ -0.48
PDCD2-211ENST00000544336 PRO0461Q9UI25 63 aa12□□□□□ -0.49
PDCD2-211ENST00000544336 A0A087WVE0 104 aa11.98□□□□□ -0.49
PDCD2-211ENST00000544336 CYP4F30PQ9H0H9 118 aa11.94□□□□□ -0.5
PDCD2-211ENST00000544336 CRIPTQ9P021 101 aa11.93□□□□□ -0.5
PDCD2-211ENST00000544336 KMT2DO14686 5537 aa11.9□□□□□ -0.51
PDCD2-211ENST00000544336 K7EP34 96 aa11.88□□□□□ -0.51
PDCD2-211ENST00000544336 COL5A1-AS1Q5SY13 56 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms