RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
GTF2H3-209ENST00000542279 HECTD1Q9ULT8 2610 aa0.54□□□□□ -2.32
GTF2H3-209ENST00000542279 LYSTQ99698 3801 aa0.53□□□□□ -2.32
GTF2H3-209ENST00000542279 APC2O95996 2303 aa0.53□□□□□ -2.32
GTF2H3-209ENST00000542279 DEFB131AP59861 70 aa0.53□□□□□ -2.32
GTF2H3-209ENST00000542279 PRCDQ00LT1 54 aa0.53□□□□□ -2.32
GTF2H3-209ENST00000542279 TOMM7Q9P0U1 55 aa0.53□□□□□ -2.32
GTF2H3-209ENST00000542279 MGAQ8IWI9 3026 aa0.52□□□□□ -2.33
GTF2H3-209ENST00000542279 FRAS1Q86XX4 4008 aa0.51□□□□□ -2.33
GTF2H3-209ENST00000542279 DEFB109BQ30KR1 87 aa0.51□□□□□ -2.33
GTF2H3-209ENST00000542279 CHD8Q9HCK8 2581 aa0.51□□□□□ -2.33
GTF2H3-209ENST00000542279 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
GTF2H3-209ENST00000542279 MAP1BP46821 2468 aaKnown RBP0.5□□□□□ -2.33
GTF2H3-209ENST00000542279 VPS13DQ5THJ4 4388 aa0.5□□□□□ -2.33
GTF2H3-209ENST00000542279 H3BUA1 57 aa0.5□□□□□ -2.33
GTF2H3-209ENST00000542279 PRM1P04553 51 aa0.5□□□□□ -2.33
GTF2H3-209ENST00000542279 SMR3AQ99954 134 aa0.5□□□□□ -2.33
GTF2H3-209ENST00000542279 GCN1Q92616 2671 aaKnown RBP0.49□□□□□ -2.33
GTF2H3-209ENST00000542279 SPG11Q96JI7 2443 aa0.49□□□□□ -2.33
GTF2H3-209ENST00000542279 RIF1Q5UIP0 2472 aaKnown RBP0.48□□□□□ -2.33
GTF2H3-209ENST00000542279 HIVEP3Q5T1R4 2406 aa0.48□□□□□ -2.33
GTF2H3-209ENST00000542279 TENM4Q6N022 2769 aa0.48□□□□□ -2.33
GTF2H3-209ENST00000542279 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
GTF2H3-209ENST00000542279 RPL39P5Q59GN2 51 aa0.48□□□□□ -2.33
GTF2H3-209ENST00000542279 CRYBG3Q68DQ2 2970 aa0.48□□□□□ -2.33
GTF2H3-209ENST00000542279 KMT2DO14686 5537 aa0.48□□□□□ -2.33
GTF2H3-209ENST00000542279 VPS13BQ7Z7G8 4022 aa0.48□□□□□ -2.33
GTF2H3-209ENST00000542279 DNAH11Q96DT5 4516 aa0.47□□□□□ -2.33
GTF2H3-209ENST00000542279 ACANP16112 2415 aa0.47□□□□□ -2.33
GTF2H3-209ENST00000542279 KMT2AQ03164 3969 aa0.47□□□□□ -2.33
GTF2H3-209ENST00000542279 USP9YO00507 2555 aaPredicted RBP0.47□□□□□ -2.33
GTF2H3-209ENST00000542279 NBEAL2Q6ZNJ1 2754 aa0.47□□□□□ -2.33
GTF2H3-209ENST00000542279 ANK2Q01484 3957 aa0.47□□□□□ -2.33
GTF2H3-209ENST00000542279 FAT2Q9NYQ8 4349 aa0.47□□□□□ -2.33
GTF2H3-209ENST00000542279 NBPF19A0A087WUL8 3843 aa0.46□□□□□ -2.34
GTF2H3-209ENST00000542279 DEFB135Q30KP9 77 aa0.46□□□□□ -2.34
GTF2H3-209ENST00000542279 PRKDCP78527 4128 aaKnown RBP0.46□□□□□ -2.34
GTF2H3-209ENST00000542279 LRRK2Q5S007 2527 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 PTPN13Q12923 2485 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 DCHS2Q6V1P9 2916 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 ZFHX4Q86UP3 3567 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 CEP250Q9BV73 2442 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 FAM186AA6NE01 2351 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 DEFB108AA8MXU0 73 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 K7EIM0 57 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 DEFB1P60022 68 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 TMEM167AQ8TBQ9 72 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 RELNP78509 3460 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 ZZEF1O43149 2961 aa0.45□□□□□ -2.34
GTF2H3-209ENST00000542279 SPENQ96T58 3664 aaKnown RBP0.44□□□□□ -2.34
GTF2H3-209ENST00000542279 NF1P21359 2839 aa0.44□□□□□ -2.34
GTF2H3-209ENST00000542279 SPINK6Q6UWN8 80 aa0.44□□□□□ -2.34
GTF2H3-209ENST00000542279 NOP10Q9NPE3 64 aaKnown RBP0.44□□□□□ -2.34
GTF2H3-209ENST00000542279 ANKHD1Q8IWZ3 2542 aaKnown RBP0.44□□□□□ -2.34
GTF2H3-209ENST00000542279 FLNCQ14315 2725 aa0.44□□□□□ -2.34
GTF2H3-209ENST00000542279 ANKRD11Q6UB99 2663 aaPredicted RBP0.43□□□□□ -2.34
GTF2H3-209ENST00000542279 COL12A1Q99715 3063 aa0.43□□□□□ -2.34
GTF2H3-209ENST00000542279 EPG5Q9HCE0 2579 aa0.43□□□□□ -2.34
GTF2H3-209ENST00000542279 M0R2T5 61 aa0.43□□□□□ -2.34
GTF2H3-209ENST00000542279 ZFYVE26Q68DK2 2539 aa0.43□□□□□ -2.34
GTF2H3-209ENST00000542279 CUBNO60494 3623 aa0.43□□□□□ -2.34
GTF2H3-209ENST00000542279 ACACBO00763 2458 aa0.43□□□□□ -2.34
GTF2H3-209ENST00000542279 PKD1L1Q8TDX9 2849 aa0.42□□□□□ -2.34
GTF2H3-209ENST00000542279 SETXQ7Z333 2677 aaKnown RBP0.42□□□□□ -2.34
GTF2H3-209ENST00000542279 NSD1Q96L73 2696 aaPredicted RBP0.42□□□□□ -2.34
GTF2H3-209ENST00000542279 SACSQ9NZJ4 4579 aa0.42□□□□□ -2.34
GTF2H3-209ENST00000542279 ITPR3Q14573 2671 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 TLN2Q9Y4G6 2542 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 FRYQ5TBA9 3013 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 DMXL1Q9Y485 3027 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 CELSR3Q9NYQ7 3312 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 APELAP0DMC3 54 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 MTORP42345 2549 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 NCOR2Q9Y618 2525 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 TACC2O95359 2948 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 MYCBP2O75592 4640 aa0.41□□□□□ -2.34
GTF2H3-209ENST00000542279 SONP18583 2426 aaKnown RBP0.4□□□□□ -2.34
GTF2H3-209ENST00000542279 HRNRQ86YZ3 2850 aaPredicted RBP0.4□□□□□ -2.34
GTF2H3-209ENST00000542279 HIVEP1P15822 2718 aa0.4□□□□□ -2.35
GTF2H3-209ENST00000542279 MYO18BQ8IUG5 2567 aa0.4□□□□□ -2.35
GTF2H3-209ENST00000542279 CACNA1AO00555 2505 aa0.4□□□□□ -2.35
GTF2H3-209ENST00000542279 COL7A1Q02388 2944 aa0.4□□□□□ -2.35
GTF2H3-209ENST00000542279 M0QZ58 72 aa0.39□□□□□ -2.35
GTF2H3-209ENST00000542279 DEFB136Q30KP8 78 aa0.39□□□□□ -2.35
GTF2H3-209ENST00000542279 PKHD1L1Q86WI1 4243 aa0.39□□□□□ -2.35
GTF2H3-209ENST00000542279 UNC79Q9P2D8 2635 aa0.39□□□□□ -2.35
GTF2H3-209ENST00000542279 ZANQ9Y493 2812 aa0.39□□□□□ -2.35
GTF2H3-209ENST00000542279 RANBP2P49792 3224 aaKnown RBP0.39□□□□□ -2.35
GTF2H3-209ENST00000542279 DNAH7Q8WXX0 4024 aa0.39□□□□□ -2.35
GTF2H3-209ENST00000542279 HSPG2P98160 4391 aa0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 H0YGG7 62 aa0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 H3BNG1 76 aa0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 STATHP02808 62 aa0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 SYNE1Q8NF91 8797 aaKnown RBP0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 DNAH8Q96JB1 4490 aa0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 TEP1Q99973 2627 aaKnown RBP0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 COL6A3P12111 3177 aa0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 C5orf42Q9H799 3197 aa0.38□□□□□ -2.35
GTF2H3-209ENST00000542279 DOPEY1Q5JWR5 2465 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms