RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 SPRR1AP35321 89 aa3.58□□□□□ -1.84
DMD-228ENST00000541735 DCHS1Q96JQ0 3298 aa3.58□□□□□ -1.84
DMD-228ENST00000541735 ZZEF1O43149 2961 aa3.57□□□□□ -1.84
DMD-228ENST00000541735 IGSF10Q6WRI0 2623 aa3.57□□□□□ -1.84
DMD-228ENST00000541735 LCE2DQ5TA82 110 aaPredicted RBP3.57□□□□□ -1.84
DMD-228ENST00000541735 Q5VV11 94 aa3.56□□□□□ -1.84
DMD-228ENST00000541735 ZNF292O60281 2723 aa3.56□□□□□ -1.84
DMD-228ENST00000541735 P0C880 135 aa3.56□□□□□ -1.84
DMD-228ENST00000541735 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
DMD-228ENST00000541735 KRTAP11-1Q8IUC1 163 aa3.55□□□□□ -1.84
DMD-228ENST00000541735 TACC2O95359 2948 aa3.55□□□□□ -1.84
DMD-228ENST00000541735 LRBAP50851 2863 aa3.54□□□□□ -1.84
DMD-228ENST00000541735 KALRNO60229 2985 aa3.54□□□□□ -1.84
DMD-228ENST00000541735 Q5XG85 94 aa3.52□□□□□ -1.85
DMD-228ENST00000541735 NBEAQ8NFP9 2946 aa3.52□□□□□ -1.85
DMD-228ENST00000541735 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
DMD-228ENST00000541735 RELNP78509 3460 aa3.52□□□□□ -1.85
DMD-228ENST00000541735 NBEAL2Q6ZNJ1 2754 aa3.51□□□□□ -1.85
DMD-228ENST00000541735 KRTAP13-2Q52LG2 175 aa3.5□□□□□ -1.85
DMD-228ENST00000541735 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
DMD-228ENST00000541735 GCN1Q92616 2671 aaKnown RBP3.5□□□□□ -1.85
DMD-228ENST00000541735 NSD1Q96L73 2696 aaPredicted RBP3.49□□□□□ -1.85
DMD-228ENST00000541735 ZFHX4Q86UP3 3567 aa3.49□□□□□ -1.85
DMD-228ENST00000541735 ITPR2Q14571 2701 aa3.49□□□□□ -1.85
DMD-228ENST00000541735 Q6ZRN7 208 aaPredicted RBP3.45□□□□□ -1.86
DMD-228ENST00000541735 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
DMD-228ENST00000541735 ASH1LQ9NR48 2969 aaKnown RBP3.43□□□□□ -1.86
DMD-228ENST00000541735 FLNCQ14315 2725 aa3.43□□□□□ -1.86
DMD-228ENST00000541735 UBR5O95071 2799 aaPredicted RBP3.43□□□□□ -1.86
DMD-228ENST00000541735 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
DMD-228ENST00000541735 UTP20O75691 2785 aaKnown RBP3.42□□□□□ -1.86
DMD-228ENST00000541735 XP32Q5T750 250 aa3.41□□□□□ -1.86
DMD-228ENST00000541735 KRTAP4-16G5E9R7 235 aaPredicted RBP3.4□□□□□ -1.87
DMD-228ENST00000541735 ITPR1Q14643 2758 aa3.39□□□□□ -1.87
DMD-228ENST00000541735 HIVEP1P15822 2718 aa3.38□□□□□ -1.87
DMD-228ENST00000541735 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
DMD-228ENST00000541735 SMG1Q96Q15 3661 aaKnown RBP3.38□□□□□ -1.87
DMD-228ENST00000541735 CUBNO60494 3623 aa3.37□□□□□ -1.87
DMD-228ENST00000541735 APCP25054 2843 aa3.37□□□□□ -1.87
DMD-228ENST00000541735 KRTAP21-3Q3LHN1 58 aa3.37□□□□□ -1.87
DMD-228ENST00000541735 TENM4Q6N022 2769 aa3.37□□□□□ -1.87
DMD-228ENST00000541735 KRTAP29-1A8MX34 341 aaPredicted RBP3.37□□□□□ -1.87
DMD-228ENST00000541735 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
DMD-228ENST00000541735 KRTAP7-1Q8IUC3 87 aa3.35□□□□□ -1.87
DMD-228ENST00000541735 NBPF19A0A087WUL8 3843 aa3.35□□□□□ -1.87
DMD-228ENST00000541735 CSMD1Q96PZ7 3565 aa3.34□□□□□ -1.87
DMD-228ENST00000541735 CELSR2Q9HCU4 2923 aa3.33□□□□□ -1.88
DMD-228ENST00000541735 SVEP1Q4LDE5 3571 aa3.32□□□□□ -1.88
DMD-228ENST00000541735 A6NN06 94 aa3.31□□□□□ -1.88
DMD-228ENST00000541735 ZFHX3Q15911 3703 aa3.3□□□□□ -1.88
DMD-228ENST00000541735 NIPBLQ6KC79 2804 aaeCLIP3.29□□□□□ -1.88
DMD-228ENST00000541735 TENM1Q9UKZ4 2725 aa3.29□□□□□ -1.88
DMD-228ENST00000541735 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
DMD-228ENST00000541735 DCHS2Q6V1P9 2916 aa3.28□□□□□ -1.88
DMD-228ENST00000541735 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
DMD-228ENST00000541735 CSMD2Q7Z408 3487 aa3.27□□□□□ -1.89
DMD-228ENST00000541735 SPENQ96T58 3664 aaKnown RBP3.27□□□□□ -1.89
DMD-228ENST00000541735 KRTAP13-1Q8IUC0 172 aa3.26□□□□□ -1.89
DMD-228ENST00000541735 TENM2Q9NT68 2774 aa3.26□□□□□ -1.89
DMD-228ENST00000541735 FBN2P35556 2912 aa3.26□□□□□ -1.89
DMD-228ENST00000541735 CELSR1Q9NYQ6 3014 aa3.24□□□□□ -1.89
DMD-228ENST00000541735 KRTAP1-4P0C5Y4 121 aa3.23□□□□□ -1.89
DMD-228ENST00000541735 NF1P21359 2839 aa3.23□□□□□ -1.89
DMD-228ENST00000541735 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
DMD-228ENST00000541735 PKD1L1Q8TDX9 2849 aa3.22□□□□□ -1.89
DMD-228ENST00000541735 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.9
DMD-228ENST00000541735 VWFP04275 2813 aa3.19□□□□□ -1.9
DMD-228ENST00000541735 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
DMD-228ENST00000541735 H0YAA0 97 aa3.18□□□□□ -1.9
DMD-228ENST00000541735 HRNRQ86YZ3 2850 aaPredicted RBP3.17□□□□□ -1.9
DMD-228ENST00000541735 TENM3Q9P273 2699 aa3.16□□□□□ -1.9
DMD-228ENST00000541735 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
DMD-228ENST00000541735 PDZD2O15018 2839 aa3.12□□□□□ -1.91
DMD-228ENST00000541735 FBN1P35555 2871 aaKnown RBP3.09□□□□□ -1.91
DMD-228ENST00000541735 LORP23490 312 aaPredicted RBP3.09□□□□□ -1.92
DMD-228ENST00000541735 VPS13CQ709C8 3753 aa3.08□□□□□ -1.92
DMD-228ENST00000541735 BSNQ9UPA5 3926 aa3.08□□□□□ -1.92
DMD-228ENST00000541735 MXRA5Q9NR99 2828 aa3.07□□□□□ -1.92
DMD-228ENST00000541735 KRTAP3-3Q9BYR6 98 aa3.06□□□□□ -1.92
DMD-228ENST00000541735 KRTAP3-2Q9BYR7 98 aa3.06□□□□□ -1.92
DMD-228ENST00000541735 SRRM2Q9UQ35 2752 aaKnown RBP3.03□□□□□ -1.92
DMD-228ENST00000541735 TGP01266 2768 aa3.02□□□□□ -1.93
DMD-228ENST00000541735 OTOGQ6ZRI0 2925 aa3□□□□□ -1.93
DMD-228ENST00000541735 TRRAPQ9Y4A5 3859 aa2.98□□□□□ -1.93
DMD-228ENST00000541735 KRTAP4-5Q9BYR2 181 aa2.98□□□□□ -1.93
DMD-228ENST00000541735 KRTAP13-4Q3LI77 160 aa2.97□□□□□ -1.93
DMD-228ENST00000541735 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
DMD-228ENST00000541735 FBN3Q75N90 2809 aa2.93□□□□□ -1.94
DMD-228ENST00000541735 ZNF469Q96JG9 3925 aaPredicted RBP2.92□□□□□ -1.94
DMD-228ENST00000541735 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
DMD-228ENST00000541735 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
DMD-228ENST00000541735 MEGF8Q7Z7M0 2845 aa2.91□□□□□ -1.94
DMD-228ENST00000541735 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.94
DMD-228ENST00000541735 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
DMD-228ENST00000541735 CSMD3Q7Z407 3707 aa2.87□□□□□ -1.95
DMD-228ENST00000541735 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
DMD-228ENST00000541735 COL7A1Q02388 2944 aa2.86□□□□□ -1.95
DMD-228ENST00000541735 ANK3Q12955 4377 aaKnown RBP2.8□□□□□ -1.96
DMD-228ENST00000541735 KRTAP3-1Q9BYR8 98 aa2.8□□□□□ -1.96
DMD-228ENST00000541735 MT1HL1P0DM35 61 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms