RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
TRERF1-205ENST00000541110 GCN1Q92616 2671 aaKnown RBP5.54□□□□□ -1.52
TRERF1-205ENST00000541110 APCP25054 2843 aa5.54□□□□□ -1.52
TRERF1-205ENST00000541110 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
TRERF1-205ENST00000541110 MAP1AP78559 2803 aaPredicted RBP5.53□□□□□ -1.52
TRERF1-205ENST00000541110 KRTAP29-1A8MX34 341 aaPredicted RBP5.53□□□□□ -1.52
TRERF1-205ENST00000541110 KRTAP13-2Q52LG2 175 aa5.51□□□□□ -1.53
TRERF1-205ENST00000541110 WDFY3Q8IZQ1 3526 aa5.51□□□□□ -1.53
TRERF1-205ENST00000541110 Q6ZRN7 208 aaPredicted RBP5.5□□□□□ -1.53
TRERF1-205ENST00000541110 LOC400499M0QZD8 3231 aa5.5□□□□□ -1.53
TRERF1-205ENST00000541110 ADGRG4Q8IZF6 3080 aa5.47□□□□□ -1.53
TRERF1-205ENST00000541110 DMXL1Q9Y485 3027 aa5.47□□□□□ -1.53
TRERF1-205ENST00000541110 DMXL2Q8TDJ6 3036 aa5.47□□□□□ -1.53
TRERF1-205ENST00000541110 NBEAL2Q6ZNJ1 2754 aa5.45□□□□□ -1.54
TRERF1-205ENST00000541110 NSD1Q96L73 2696 aaPredicted RBP5.45□□□□□ -1.54
TRERF1-205ENST00000541110 IGSF10Q6WRI0 2623 aa5.43□□□□□ -1.54
TRERF1-205ENST00000541110 DMDP11532 3685 aa5.43□□□□□ -1.54
TRERF1-205ENST00000541110 LRBAP50851 2863 aa5.42□□□□□ -1.54
TRERF1-205ENST00000541110 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
TRERF1-205ENST00000541110 MUC3AQ02505 3323 aa5.42□□□□□ -1.54
TRERF1-205ENST00000541110 KALRNO60229 2985 aa5.42□□□□□ -1.54
TRERF1-205ENST00000541110 CFAP47Q6ZTR5 3102 aa5.42□□□□□ -1.54
TRERF1-205ENST00000541110 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
TRERF1-205ENST00000541110 ATMQ13315 3056 aa5.39□□□□□ -1.55
TRERF1-205ENST00000541110 TACC2O95359 2948 aa5.39□□□□□ -1.55
TRERF1-205ENST00000541110 A6NN06 94 aa5.38□□□□□ -1.55
TRERF1-205ENST00000541110 XP32Q5T750 250 aa5.37□□□□□ -1.55
TRERF1-205ENST00000541110 ASPMQ8IZT6 3477 aa5.35□□□□□ -1.55
TRERF1-205ENST00000541110 KRTAP21-3Q3LHN1 58 aa5.33□□□□□ -1.56
TRERF1-205ENST00000541110 LAMA5O15230 3695 aa5.32□□□□□ -1.56
TRERF1-205ENST00000541110 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
TRERF1-205ENST00000541110 KRTAP7-1Q8IUC3 87 aa5.31□□□□□ -1.56
TRERF1-205ENST00000541110 ZZEF1O43149 2961 aa5.3□□□□□ -1.56
TRERF1-205ENST00000541110 KRTAP13-1Q8IUC0 172 aa5.3□□□□□ -1.56
TRERF1-205ENST00000541110 UBR5O95071 2799 aaPredicted RBP5.28□□□□□ -1.56
TRERF1-205ENST00000541110 FLNCQ14315 2725 aa5.28□□□□□ -1.56
TRERF1-205ENST00000541110 UTP20O75691 2785 aaKnown RBP5.28□□□□□ -1.56
TRERF1-205ENST00000541110 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
TRERF1-205ENST00000541110 ZFHX4Q86UP3 3567 aa5.26□□□□□ -1.57
TRERF1-205ENST00000541110 NBPF19A0A087WUL8 3843 aa5.24□□□□□ -1.57
TRERF1-205ENST00000541110 DCHS1Q96JQ0 3298 aa5.24□□□□□ -1.57
TRERF1-205ENST00000541110 RELNP78509 3460 aa5.21□□□□□ -1.58
TRERF1-205ENST00000541110 ITPR1Q14643 2758 aa5.19□□□□□ -1.58
TRERF1-205ENST00000541110 HRNRQ86YZ3 2850 aaPredicted RBP5.18□□□□□ -1.58
TRERF1-205ENST00000541110 HIVEP1P15822 2718 aa5.17□□□□□ -1.58
TRERF1-205ENST00000541110 H0YAA0 97 aa5.17□□□□□ -1.58
TRERF1-205ENST00000541110 SMG1Q96Q15 3661 aaKnown RBP5.14□□□□□ -1.59
TRERF1-205ENST00000541110 ZANQ9Y493 2812 aa5.14□□□□□ -1.59
TRERF1-205ENST00000541110 TENM1Q9UKZ4 2725 aa5.13□□□□□ -1.59
TRERF1-205ENST00000541110 KRTAP1-4P0C5Y4 121 aa5.11□□□□□ -1.59
TRERF1-205ENST00000541110 DCHS2Q6V1P9 2916 aa5.11□□□□□ -1.59
TRERF1-205ENST00000541110 KRTAP13-3Q3SY46 172 aa5.09□□□□□ -1.59
TRERF1-205ENST00000541110 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
TRERF1-205ENST00000541110 CSMD1Q96PZ7 3565 aa5.07□□□□□ -1.6
TRERF1-205ENST00000541110 CELSR2Q9HCU4 2923 aa5.04□□□□□ -1.6
TRERF1-205ENST00000541110 NF1P21359 2839 aa5.03□□□□□ -1.6
TRERF1-205ENST00000541110 SPENQ96T58 3664 aaKnown RBP5.02□□□□□ -1.61
TRERF1-205ENST00000541110 CELSR1Q9NYQ6 3014 aa5.02□□□□□ -1.61
TRERF1-205ENST00000541110 FBN2P35556 2912 aa5.02□□□□□ -1.61
TRERF1-205ENST00000541110 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
TRERF1-205ENST00000541110 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
TRERF1-205ENST00000541110 SVEP1Q4LDE5 3571 aa5□□□□□ -1.61
TRERF1-205ENST00000541110 BSNQ9UPA5 3926 aa4.98□□□□□ -1.61
TRERF1-205ENST00000541110 TENM3Q9P273 2699 aa4.97□□□□□ -1.61
TRERF1-205ENST00000541110 MXRA5Q9NR99 2828 aa4.96□□□□□ -1.62
TRERF1-205ENST00000541110 TENM4Q6N022 2769 aa4.9□□□□□ -1.62
TRERF1-205ENST00000541110 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.62
TRERF1-205ENST00000541110 TGP01266 2768 aa4.9□□□□□ -1.63
TRERF1-205ENST00000541110 NIPBLQ6KC79 2804 aaeCLIP4.85□□□□□ -1.63
TRERF1-205ENST00000541110 CUBNO60494 3623 aa4.84□□□□□ -1.63
TRERF1-205ENST00000541110 PDZD2O15018 2839 aa4.83□□□□□ -1.64
TRERF1-205ENST00000541110 TENM2Q9NT68 2774 aa4.81□□□□□ -1.64
TRERF1-205ENST00000541110 VWFP04275 2813 aa4.8□□□□□ -1.64
TRERF1-205ENST00000541110 CSMD2Q7Z408 3487 aa4.79□□□□□ -1.64
TRERF1-205ENST00000541110 PKD1L1Q8TDX9 2849 aa4.78□□□□□ -1.64
TRERF1-205ENST00000541110 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
TRERF1-205ENST00000541110 VPS13CQ709C8 3753 aa4.76□□□□□ -1.65
TRERF1-205ENST00000541110 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
TRERF1-205ENST00000541110 KRTAP10-12P60413 245 aa4.65□□□□□ -1.66
TRERF1-205ENST00000541110 OTOGQ6ZRI0 2925 aa4.62□□□□□ -1.67
TRERF1-205ENST00000541110 FBN1P35555 2871 aaKnown RBP4.58□□□□□ -1.68
TRERF1-205ENST00000541110 ZNF469Q96JG9 3925 aaPredicted RBP4.58□□□□□ -1.68
TRERF1-205ENST00000541110 TRRAPQ9Y4A5 3859 aa4.56□□□□□ -1.68
TRERF1-205ENST00000541110 MEGF8Q7Z7M0 2845 aa4.56□□□□□ -1.68
TRERF1-205ENST00000541110 KRTAP10-6P60371 365 aaPredicted RBP4.55□□□□□ -1.68
TRERF1-205ENST00000541110 INE1O15225 51 aa4.54□□□□□ -1.68
TRERF1-205ENST00000541110 COL7A1Q02388 2944 aa4.53□□□□□ -1.68
TRERF1-205ENST00000541110 LORP23490 312 aaPredicted RBP4.5□□□□□ -1.69
TRERF1-205ENST00000541110 KRTAP3-1Q9BYR8 98 aa4.48□□□□□ -1.69
TRERF1-205ENST00000541110 AKAP9Q99996 3911 aa4.48□□□□□ -1.69
TRERF1-205ENST00000541110 ANK3Q12955 4377 aaKnown RBP4.48□□□□□ -1.69
TRERF1-205ENST00000541110 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
TRERF1-205ENST00000541110 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
TRERF1-205ENST00000541110 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
TRERF1-205ENST00000541110 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
TRERF1-205ENST00000541110 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
TRERF1-205ENST00000541110 CSMD3Q7Z407 3707 aa4.41□□□□□ -1.7
TRERF1-205ENST00000541110 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
TRERF1-205ENST00000541110 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
TRERF1-205ENST00000541110 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms