RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
CYB561A3-215ENST00000540317 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
CYB561A3-215ENST00000540317 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
CYB561A3-215ENST00000540317 HRCT1Q6UXD1 115 aa7.02□□□□□ -1.29
CYB561A3-215ENST00000540317 Q96NJ1 140 aa7.01□□□□□ -1.29
CYB561A3-215ENST00000540317 TMEM258P61165 79 aa7□□□□□ -1.29
CYB561A3-215ENST00000540317 NDUFC1O43677 76 aa6.99□□□□□ -1.29
CYB561A3-215ENST00000540317 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
CYB561A3-215ENST00000540317 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
CYB561A3-215ENST00000540317 TMEM254Q8TBM7 123 aa6.98□□□□□ -1.29
CYB561A3-215ENST00000540317 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
CYB561A3-215ENST00000540317 WFDC13Q8IUB5 93 aa6.96□□□□□ -1.29
CYB561A3-215ENST00000540317 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
CYB561A3-215ENST00000540317 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
CYB561A3-215ENST00000540317 Q5XG85 94 aa6.95□□□□□ -1.3
CYB561A3-215ENST00000540317 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
CYB561A3-215ENST00000540317 A0A087X002 238 aa6.95□□□□□ -1.3
CYB561A3-215ENST00000540317 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
CYB561A3-215ENST00000540317 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
CYB561A3-215ENST00000540317 A0A0U1RQV1 116 aa6.94□□□□□ -1.3
CYB561A3-215ENST00000540317 MMP24-AS1A0A0U1RRL7 71 aa6.94□□□□□ -1.3
CYB561A3-215ENST00000540317 hDV103S1A0JD37 113 aa6.93□□□□□ -1.3
CYB561A3-215ENST00000540317 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
CYB561A3-215ENST00000540317 H7BZZ5 65 aa6.92□□□□□ -1.3
CYB561A3-215ENST00000540317 LIMD2Q9BT23 127 aa6.92□□□□□ -1.3
CYB561A3-215ENST00000540317 C8orf17Q9NRJ1 99 aa6.92□□□□□ -1.3
CYB561A3-215ENST00000540317 IGHV6-1A0A0B4J1U7 121 aa6.9□□□□□ -1.31
CYB561A3-215ENST00000540317 H3BPC8 53 aa6.9□□□□□ -1.31
CYB561A3-215ENST00000540317 MP68P56378 58 aa6.9□□□□□ -1.31
CYB561A3-215ENST00000540317 C4orf48Q5BLP8 95 aa6.9□□□□□ -1.31
CYB561A3-215ENST00000540317 TYMSOSQ8TAI1 123 aa6.9□□□□□ -1.31
CYB561A3-215ENST00000540317 TP53AIP1Q9HCN2 124 aa6.9□□□□□ -1.31
CYB561A3-215ENST00000540317 TNXBP22105 4242 aa6.89□□□□□ -1.31
CYB561A3-215ENST00000540317 HMCN2Q8NDA2 5059 aa6.89□□□□□ -1.31
CYB561A3-215ENST00000540317 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
CYB561A3-215ENST00000540317 PRR26Q8N8Z3 221 aa6.89□□□□□ -1.31
CYB561A3-215ENST00000540317 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
CYB561A3-215ENST00000540317 C8orf87E5RJ46 101 aa6.87□□□□□ -1.31
CYB561A3-215ENST00000540317 SPINK1P00995 79 aa6.87□□□□□ -1.31
CYB561A3-215ENST00000540317 FAM236DA0A1B0GTK5 79 aa6.86□□□□□ -1.31
CYB561A3-215ENST00000540317 FAM236CP0DP71 79 aa6.86□□□□□ -1.31
CYB561A3-215ENST00000540317 RPS29P62273 56 aaKnown RBP6.86□□□□□ -1.31
CYB561A3-215ENST00000540317 SPAG11AQ6PDA7 123 aa6.86□□□□□ -1.31
CYB561A3-215ENST00000540317 ZCCHC13Q8WW36 166 aaKnown RBP6.85□□□□□ -1.31
CYB561A3-215ENST00000540317 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
CYB561A3-215ENST00000540317 C1orf195Q5TG92 126 aa6.84□□□□□ -1.31
CYB561A3-215ENST00000540317 H0Y9P7 68 aa6.83□□□□□ -1.32
CYB561A3-215ENST00000540317 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
CYB561A3-215ENST00000540317 TRAV22A0A0B4J277 110 aa6.82□□□□□ -1.32
CYB561A3-215ENST00000540317 LINC00304Q8N9R0 145 aa6.81□□□□□ -1.32
CYB561A3-215ENST00000540317 NDUFS5O43920 106 aa6.79□□□□□ -1.32
CYB561A3-215ENST00000540317 LINC00313P59037 77 aa6.79□□□□□ -1.32
CYB561A3-215ENST00000540317 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
CYB561A3-215ENST00000540317 SERP1Q9Y6X1 66 aa6.79□□□□□ -1.32
CYB561A3-215ENST00000540317 NOTCH2NLQ7Z3S9 236 aa6.78□□□□□ -1.32
CYB561A3-215ENST00000540317 C1orf64Q8NEQ6 169 aa6.77□□□□□ -1.33
CYB561A3-215ENST00000540317 LRP2P98164 4655 aa6.74□□□□□ -1.33
CYB561A3-215ENST00000540317 PRR4Q16378 134 aa6.73□□□□□ -1.33
CYB561A3-215ENST00000540317 Q8N9P0 234 aaPredicted RBP6.73□□□□□ -1.33
CYB561A3-215ENST00000540317 SPANXA2-OT1Q8N9U9 137 aa6.73□□□□□ -1.33
CYB561A3-215ENST00000540317 CYP4F30PQ9H0H9 118 aa6.7□□□□□ -1.34
CYB561A3-215ENST00000540317 LOC101927531A0A1B0GV80 90 aa6.69□□□□□ -1.34
CYB561A3-215ENST00000540317 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
CYB561A3-215ENST00000540317 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
CYB561A3-215ENST00000540317 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
CYB561A3-215ENST00000540317 LPAP08519 4548 aa6.64□□□□□ -1.35
CYB561A3-215ENST00000540317 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
CYB561A3-215ENST00000540317 SMIM26A0A096LP01 95 aa6.64□□□□□ -1.35
CYB561A3-215ENST00000540317 Q5W150 140 aa6.64□□□□□ -1.35
CYB561A3-215ENST00000540317 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
CYB561A3-215ENST00000540317 PCOTHQ58A44 107 aa6.61□□□□□ -1.35
CYB561A3-215ENST00000540317 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
CYB561A3-215ENST00000540317 FP248Q71RG6 208 aaPredicted RBP6.53□□□□□ -1.36
CYB561A3-215ENST00000540317 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
CYB561A3-215ENST00000540317 A8MUU9 505 aa6.52□□□□□ -1.37
CYB561A3-215ENST00000540317 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
CYB561A3-215ENST00000540317 C9orf92A6NGG3 77 aa6.48□□□□□ -1.37
CYB561A3-215ENST00000540317 HRES1P13985 223 aa6.48□□□□□ -1.37
CYB561A3-215ENST00000540317 COA5Q86WW8 74 aa6.48□□□□□ -1.37
CYB561A3-215ENST00000540317 MUC2Q02817 5179 aa6.48□□□□□ -1.37
CYB561A3-215ENST00000540317 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
CYB561A3-215ENST00000540317 V9GYY9 64 aa6.48□□□□□ -1.37
CYB561A3-215ENST00000540317 ACYP2P14621 99 aa6.47□□□□□ -1.37
CYB561A3-215ENST00000540317 IGKV2D-30A0A075B6S6 120 aa6.46□□□□□ -1.38
CYB561A3-215ENST00000540317 Q1T7F1 81 aa6.46□□□□□ -1.38
CYB561A3-215ENST00000540317 Q75L30 129 aa6.46□□□□□ -1.38
CYB561A3-215ENST00000540317 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
CYB561A3-215ENST00000540317 C4orf26Q17RF5 130 aa6.44□□□□□ -1.38
CYB561A3-215ENST00000540317 MPLKIPQ8TAP9 179 aa6.44□□□□□ -1.38
CYB561A3-215ENST00000540317 A8MUN3 132 aa6.37□□□□□ -1.39
CYB561A3-215ENST00000540317 CHKB-CPT1BH3BT56 60 aa6.36□□□□□ -1.39
CYB561A3-215ENST00000540317 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
CYB561A3-215ENST00000540317 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
CYB561A3-215ENST00000540317 SPINK7P58062 85 aa6.32□□□□□ -1.4
CYB561A3-215ENST00000540317 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
CYB561A3-215ENST00000540317 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
CYB561A3-215ENST00000540317 XP32Q5T750 250 aa6.31□□□□□ -1.4
CYB561A3-215ENST00000540317 PSPHP1O15172 72 aa6.28□□□□□ -1.4
CYB561A3-215ENST00000540317 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
CYB561A3-215ENST00000540317 PRR15LQ9BU68 103 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms