RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
TRAF3-204ENST00000539721 IMUPQ9GZP8 106 aa9.08□□□□□ -0.96
TRAF3-204ENST00000539721 A0A1B0GVX0 72 aa9.07□□□□□ -0.96
TRAF3-204ENST00000539721 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
TRAF3-204ENST00000539721 A0A087WVE0 104 aa9.06□□□□□ -0.96
TRAF3-204ENST00000539721 FP248Q71RG6 208 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-204ENST00000539721 C8orf17Q9NRJ1 99 aa9.01□□□□□ -0.97
TRAF3-204ENST00000539721 PCLOQ9Y6V0 5065 aa9□□□□□ -0.97
TRAF3-204ENST00000539721 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
TRAF3-204ENST00000539721 HCG22E2RYF7 251 aa8.99□□□□□ -0.97
TRAF3-204ENST00000539721 C8orf87E5RJ46 101 aa8.99□□□□□ -0.97
TRAF3-204ENST00000539721 NOTCH2NLQ7Z3S9 236 aa8.99□□□□□ -0.97
TRAF3-204ENST00000539721 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
TRAF3-204ENST00000539721 LINC00313P59037 77 aa8.97□□□□□ -0.97
TRAF3-204ENST00000539721 PRR4Q16378 134 aa8.97□□□□□ -0.97
TRAF3-204ENST00000539721 IGLV7-46A0A075B6I9 117 aa8.96□□□□□ -0.97
TRAF3-204ENST00000539721 CASC2Q6XLA1 102 aa8.96□□□□□ -0.98
TRAF3-204ENST00000539721 FAM236AA0A1B0GUQ0 79 aa8.95□□□□□ -0.98
TRAF3-204ENST00000539721 FAM236BA0A1B0GV22 79 aa8.95□□□□□ -0.98
TRAF3-204ENST00000539721 hDV103S1A0JD37 113 aa8.94□□□□□ -0.98
TRAF3-204ENST00000539721 C9orf92A6NGG3 77 aa8.94□□□□□ -0.98
TRAF3-204ENST00000539721 TMEM254Q8TBM7 123 aa8.91□□□□□ -0.98
TRAF3-204ENST00000539721 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
TRAF3-204ENST00000539721 SCGB1A1P11684 91 aa8.89□□□□□ -0.99
TRAF3-204ENST00000539721 KRTAP16-1A8MUX0 517 aa8.88□□□□□ -0.99
TRAF3-204ENST00000539721 KRTAP13-3Q3SY46 172 aa8.86□□□□□ -0.99
TRAF3-204ENST00000539721 NDUFS5O43920 106 aa8.84□□□□□ -1
TRAF3-204ENST00000539721 ATOX1O00244 68 aa8.83□□□□□ -1
TRAF3-204ENST00000539721 TPRXLQ17RH7 258 aa8.82□□□□□ -1
TRAF3-204ENST00000539721 Q8N9P0 234 aaPredicted RBP8.81□□□□□ -1
TRAF3-204ENST00000539721 XP32Q5T750 250 aa8.77□□□□□ -1.01
TRAF3-204ENST00000539721 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
TRAF3-204ENST00000539721 C20orf166-AS1Q96NR2 134 aa8.77□□□□□ -1.01
TRAF3-204ENST00000539721 OCR1Q9BZK8 76 aa8.77□□□□□ -1.01
TRAF3-204ENST00000539721 A8MUU9 505 aa8.76□□□□□ -1.01
TRAF3-204ENST00000539721 TP53AIP1Q9HCN2 124 aa8.76□□□□□ -1.01
TRAF3-204ENST00000539721 TRAV7A0A075B6U4 112 aa8.73□□□□□ -1.01
TRAF3-204ENST00000539721 HERC1Q15751 4861 aa8.73□□□□□ -1.01
TRAF3-204ENST00000539721 Q75L30 129 aa8.73□□□□□ -1.01
TRAF3-204ENST00000539721 ANAPC13Q9BS18 74 aa8.73□□□□□ -1.01
TRAF3-204ENST00000539721 UQCRQO14949 82 aa8.72□□□□□ -1.01
TRAF3-204ENST00000539721 SERP2Q8N6R1 65 aa8.71□□□□□ -1.02
TRAF3-204ENST00000539721 LPAP08519 4548 aa8.7□□□□□ -1.02
TRAF3-204ENST00000539721 RPL37P61927 97 aaKnown RBP8.69□□□□□ -1.02
TRAF3-204ENST00000539721 TRAV22A0A0B4J277 110 aa8.66□□□□□ -1.02
TRAF3-204ENST00000539721 Q5W150 140 aa8.66□□□□□ -1.02
TRAF3-204ENST00000539721 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
TRAF3-204ENST00000539721 H0Y9P7 68 aa8.65□□□□□ -1.02
TRAF3-204ENST00000539721 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
TRAF3-204ENST00000539721 COX7CP15954 63 aa8.64□□□□□ -1.03
TRAF3-204ENST00000539721 ATP11AUNQ6ZP68 121 aa8.64□□□□□ -1.03
TRAF3-204ENST00000539721 MP68P56378 58 aa8.62□□□□□ -1.03
TRAF3-204ENST00000539721 HMCN2Q8NDA2 5059 aa8.62□□□□□ -1.03
TRAF3-204ENST00000539721 LRP2P98164 4655 aa8.58□□□□□ -1.04
TRAF3-204ENST00000539721 LINC00208Q96KT6 92 aa8.57□□□□□ -1.04
TRAF3-204ENST00000539721 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
TRAF3-204ENST00000539721 C20orf197Q8N268 126 aa8.56□□□□□ -1.04
TRAF3-204ENST00000539721 H3BPC8 53 aa8.56□□□□□ -1.04
TRAF3-204ENST00000539721 C1orf64Q8NEQ6 169 aa8.56□□□□□ -1.04
TRAF3-204ENST00000539721 PCP4P48539 62 aa8.54□□□□□ -1.04
TRAF3-204ENST00000539721 SEC61BP60468 96 aaKnown RBP8.54□□□□□ -1.04
TRAF3-204ENST00000539721 A0A0U1RQV1 116 aa8.53□□□□□ -1.04
TRAF3-204ENST00000539721 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
TRAF3-204ENST00000539721 SNURFQ9Y675 71 aa8.53□□□□□ -1.04
TRAF3-204ENST00000539721 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
TRAF3-204ENST00000539721 LOC101927531A0A1B0GV80 90 aa8.52□□□□□ -1.05
TRAF3-204ENST00000539721 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
TRAF3-204ENST00000539721 KLKP1Q107X0 134 aa8.48□□□□□ -1.05
TRAF3-204ENST00000539721 C7orf65Q6ZTY9 151 aa8.48□□□□□ -1.05
TRAF3-204ENST00000539721 CYP4F30PQ9H0H9 118 aa8.47□□□□□ -1.05
TRAF3-204ENST00000539721 MUC17Q685J3 4493 aa8.46□□□□□ -1.06
TRAF3-204ENST00000539721 SPINK7P58062 85 aa8.45□□□□□ -1.06
TRAF3-204ENST00000539721 CYSTM1Q9H1C7 97 aa8.41□□□□□ -1.06
TRAF3-204ENST00000539721 NDUFC1O43677 76 aa8.38□□□□□ -1.07
TRAF3-204ENST00000539721 H7BZZ5 65 aa8.34□□□□□ -1.07
TRAF3-204ENST00000539721 HRES1P13985 223 aa8.34□□□□□ -1.07
TRAF3-204ENST00000539721 KRTAP4-1Q9BYQ7 146 aa8.34□□□□□ -1.07
TRAF3-204ENST00000539721 C4orf26Q17RF5 130 aa8.29□□□□□ -1.08
TRAF3-204ENST00000539721 SPANXA2-OT1Q8N9U9 137 aa8.25□□□□□ -1.09
TRAF3-204ENST00000539721 UBR4Q5T4S7 5183 aa8.24□□□□□ -1.09
TRAF3-204ENST00000539721 TMEM258P61165 79 aa8.22□□□□□ -1.09
TRAF3-204ENST00000539721 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
TRAF3-204ENST00000539721 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
TRAF3-204ENST00000539721 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
TRAF3-204ENST00000539721 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
TRAF3-204ENST00000539721 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
TRAF3-204ENST00000539721 DMAC1Q96GE9 116 aa8.17□□□□□ -1.1
TRAF3-204ENST00000539721 RNF213Q63HN8 5207 aa8.16□□□□□ -1.1
TRAF3-204ENST00000539721 ATP5EP56381 51 aaPredicted RBP8.16□□□□□ -1.1
TRAF3-204ENST00000539721 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.1
TRAF3-204ENST00000539721 MUC2Q02817 5179 aa8.15□□□□□ -1.11
TRAF3-204ENST00000539721 A8MUN3 132 aa8.14□□□□□ -1.11
TRAF3-204ENST00000539721 ACYP2P14621 99 aa8.1□□□□□ -1.11
TRAF3-204ENST00000539721 H1FX-AS1Q4G0G2 97 aa8.07□□□□□ -1.12
TRAF3-204ENST00000539721 KRTAP19-2Q3LHN2 52 aa8.07□□□□□ -1.12
TRAF3-204ENST00000539721 COA5Q86WW8 74 aa8.02□□□□□ -1.13
TRAF3-204ENST00000539721 CHKB-CPT1BH3BT56 60 aa7.99□□□□□ -1.13
TRAF3-204ENST00000539721 S4R3F8 94 aa7.99□□□□□ -1.13
TRAF3-204ENST00000539721 SERP1Q9Y6X1 66 aa7.97□□□□□ -1.13
TRAF3-204ENST00000539721 LCE2CQ5TA81 110 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms