RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 KMT2BQ9UMN6 2715 aaPredicted RBP8.36□□□□□ -1.07
CACNB1-206ENST00000539338 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
CACNB1-206ENST00000539338 TENM4Q6N022 2769 aa8.35□□□□□ -1.07
CACNB1-206ENST00000539338 TNRC18O15417 2968 aaPredicted RBP8.35□□□□□ -1.07
CACNB1-206ENST00000539338 CELSR2Q9HCU4 2923 aa8.34□□□□□ -1.07
CACNB1-206ENST00000539338 SPATA8Q6RVD6 105 aa8.34□□□□□ -1.07
CACNB1-206ENST00000539338 ZANQ9Y493 2812 aa8.31□□□□□ -1.08
CACNB1-206ENST00000539338 ROMO1P60602 79 aa8.29□□□□□ -1.08
CACNB1-206ENST00000539338 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
CACNB1-206ENST00000539338 USP34Q70CQ2 3546 aa8.28□□□□□ -1.08
CACNB1-206ENST00000539338 RPS29P62273 56 aaKnown RBP8.27□□□□□ -1.08
CACNB1-206ENST00000539338 NIPBLQ6KC79 2804 aaeCLIP8.27□□□□□ -1.09
CACNB1-206ENST00000539338 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
CACNB1-206ENST00000539338 M0QZ58 72 aa8.26□□□□□ -1.09
CACNB1-206ENST00000539338 ASB16-AS1Q495Z4 193 aa8.26□□□□□ -1.09
CACNB1-206ENST00000539338 DMXL1Q9Y485 3027 aa8.25□□□□□ -1.09
CACNB1-206ENST00000539338 CRYBG3Q68DQ2 2970 aa8.24□□□□□ -1.09
CACNB1-206ENST00000539338 KRTAP13-2Q52LG2 175 aa8.24□□□□□ -1.09
CACNB1-206ENST00000539338 H3BS24 57 aa8.24□□□□□ -1.09
CACNB1-206ENST00000539338 ADM2Q7Z4H4 148 aa8.23□□□□□ -1.09
CACNB1-206ENST00000539338 LOC400499M0QZD8 3231 aa8.22□□□□□ -1.09
CACNB1-206ENST00000539338 DCHS2Q6V1P9 2916 aa8.22□□□□□ -1.09
CACNB1-206ENST00000539338 HRNRQ86YZ3 2850 aaPredicted RBP8.19□□□□□ -1.1
CACNB1-206ENST00000539338 MYO15AQ9UKN7 3530 aa8.17□□□□□ -1.1
CACNB1-206ENST00000539338 A8MU10 97 aa8.17□□□□□ -1.1
CACNB1-206ENST00000539338 A6NN06 94 aa8.14□□□□□ -1.11
CACNB1-206ENST00000539338 FBN2P35556 2912 aa8.12□□□□□ -1.11
CACNB1-206ENST00000539338 NF1P21359 2839 aa8.07□□□□□ -1.12
CACNB1-206ENST00000539338 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
CACNB1-206ENST00000539338 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
CACNB1-206ENST00000539338 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
CACNB1-206ENST00000539338 A8MUU9 505 aa7.96□□□□□ -1.13
CACNB1-206ENST00000539338 WDFY3Q8IZQ1 3526 aa7.92□□□□□ -1.14
CACNB1-206ENST00000539338 RELNP78509 3460 aa7.89□□□□□ -1.15
CACNB1-206ENST00000539338 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
CACNB1-206ENST00000539338 KRTAP1-4P0C5Y4 121 aa7.85□□□□□ -1.15
CACNB1-206ENST00000539338 MXRA5Q9NR99 2828 aa7.85□□□□□ -1.15
CACNB1-206ENST00000539338 A0A1B0GVY2 172 aa7.84□□□□□ -1.15
CACNB1-206ENST00000539338 CELSR1Q9NYQ6 3014 aa7.81□□□□□ -1.16
CACNB1-206ENST00000539338 DCHS1Q96JQ0 3298 aa7.79□□□□□ -1.16
CACNB1-206ENST00000539338 TENM3Q9P273 2699 aa7.77□□□□□ -1.17
CACNB1-206ENST00000539338 TENM1Q9UKZ4 2725 aa7.77□□□□□ -1.17
CACNB1-206ENST00000539338 ZFHX4Q86UP3 3567 aa7.76□□□□□ -1.17
CACNB1-206ENST00000539338 ASPMQ8IZT6 3477 aa7.72□□□□□ -1.17
CACNB1-206ENST00000539338 NDUFAF8A1L188 74 aa7.71□□□□□ -1.17
CACNB1-206ENST00000539338 LAMA5O15230 3695 aa7.7□□□□□ -1.18
CACNB1-206ENST00000539338 XP32Q5T750 250 aa7.7□□□□□ -1.18
CACNB1-206ENST00000539338 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
CACNB1-206ENST00000539338 DMDP11532 3685 aa7.67□□□□□ -1.18
CACNB1-206ENST00000539338 TENM2Q9NT68 2774 aa7.65□□□□□ -1.18
CACNB1-206ENST00000539338 H0YAA0 97 aa7.65□□□□□ -1.18
CACNB1-206ENST00000539338 KRTAP10-10P60014 251 aa7.65□□□□□ -1.19
CACNB1-206ENST00000539338 C10orf95Q9H7T3 257 aa7.63□□□□□ -1.19
CACNB1-206ENST00000539338 TGP01266 2768 aa7.62□□□□□ -1.19
CACNB1-206ENST00000539338 CSMD1Q96PZ7 3565 aa7.6□□□□□ -1.19
CACNB1-206ENST00000539338 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
CACNB1-206ENST00000539338 TNP1P09430 55 aa7.59□□□□□ -1.19
CACNB1-206ENST00000539338 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.19
CACNB1-206ENST00000539338 PDZD2O15018 2839 aa7.54□□□□□ -1.2
CACNB1-206ENST00000539338 KRTAP10-8P60410 259 aa7.53□□□□□ -1.2
CACNB1-206ENST00000539338 SMG1Q96Q15 3661 aaKnown RBP7.53□□□□□ -1.2
CACNB1-206ENST00000539338 VWFP04275 2813 aa7.5□□□□□ -1.21
CACNB1-206ENST00000539338 KRTAP13-3Q3SY46 172 aa7.47□□□□□ -1.21
CACNB1-206ENST00000539338 P0C880 135 aa7.46□□□□□ -1.21
CACNB1-206ENST00000539338 FBN1P35555 2871 aaKnown RBP7.44□□□□□ -1.22
CACNB1-206ENST00000539338 MUC3AQ02505 3323 aa7.43□□□□□ -1.22
CACNB1-206ENST00000539338 NBPF19A0A087WUL8 3843 aa7.41□□□□□ -1.22
CACNB1-206ENST00000539338 BSNQ9UPA5 3926 aa7.41□□□□□ -1.22
CACNB1-206ENST00000539338 ANK3Q12955 4377 aaKnown RBP7.39□□□□□ -1.23
CACNB1-206ENST00000539338 PP632Q6XCG6 107 aa7.37□□□□□ -1.23
CACNB1-206ENST00000539338 SVEP1Q4LDE5 3571 aa7.36□□□□□ -1.23
CACNB1-206ENST00000539338 OTOGQ6ZRI0 2925 aa7.29□□□□□ -1.24
CACNB1-206ENST00000539338 CUBNO60494 3623 aa7.29□□□□□ -1.24
CACNB1-206ENST00000539338 SPENQ96T58 3664 aaKnown RBP7.26□□□□□ -1.25
CACNB1-206ENST00000539338 ZFHX3Q15911 3703 aa7.25□□□□□ -1.25
CACNB1-206ENST00000539338 FBN3Q75N90 2809 aa7.22□□□□□ -1.25
CACNB1-206ENST00000539338 KRTAP12-2P59991 146 aa7.19□□□□□ -1.26
CACNB1-206ENST00000539338 CSMD2Q7Z408 3487 aa7.19□□□□□ -1.26
CACNB1-206ENST00000539338 SRRM2Q9UQ35 2752 aaKnown RBP7.15□□□□□ -1.26
CACNB1-206ENST00000539338 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
CACNB1-206ENST00000539338 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
CACNB1-206ENST00000539338 TRRAPQ9Y4A5 3859 aa7.04□□□□□ -1.28
CACNB1-206ENST00000539338 MEGF8Q7Z7M0 2845 aa7.03□□□□□ -1.28
CACNB1-206ENST00000539338 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.3
CACNB1-206ENST00000539338 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
CACNB1-206ENST00000539338 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
CACNB1-206ENST00000539338 KRTAP4-5Q9BYR2 181 aa6.92□□□□□ -1.3
CACNB1-206ENST00000539338 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
CACNB1-206ENST00000539338 HUWE1Q7Z6Z7 4374 aaKnown RBP6.91□□□□□ -1.3
CACNB1-206ENST00000539338 VPS13CQ709C8 3753 aa6.84□□□□□ -1.31
CACNB1-206ENST00000539338 AKAP9Q99996 3911 aa6.81□□□□□ -1.32
CACNB1-206ENST00000539338 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
CACNB1-206ENST00000539338 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
CACNB1-206ENST00000539338 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
CACNB1-206ENST00000539338 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
CACNB1-206ENST00000539338 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
CACNB1-206ENST00000539338 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
CACNB1-206ENST00000539338 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
CACNB1-206ENST00000539338 CSMD3Q7Z407 3707 aa6.56□□□□□ -1.36
CACNB1-206ENST00000539338 DNAH1Q9P2D7 4330 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms