RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
VAMP1-207ENST00000539047 Q96NJ1 140 aa8.8□□□□□ -1
VAMP1-207ENST00000539047 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
VAMP1-207ENST00000539047 C1orf195Q5TG92 126 aa8.79□□□□□ -1
VAMP1-207ENST00000539047 FAT3Q8TDW7 4589 aa8.78□□□□□ -1
VAMP1-207ENST00000539047 A8MWP4 228 aa8.78□□□□□ -1
VAMP1-207ENST00000539047 MT-ATP8P03928 68 aa8.78□□□□□ -1
VAMP1-207ENST00000539047 IMUPQ9GZP8 106 aa8.77□□□□□ -1.01
VAMP1-207ENST00000539047 DSCR10P59022 87 aa8.75□□□□□ -1.01
VAMP1-207ENST00000539047 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
VAMP1-207ENST00000539047 K7EQZ3 153 aa8.73□□□□□ -1.01
VAMP1-207ENST00000539047 PRR15Q8IV56 129 aa8.72□□□□□ -1.01
VAMP1-207ENST00000539047 Q8N9L7 120 aa8.72□□□□□ -1.01
VAMP1-207ENST00000539047 IGHV6-1A0A0B4J1U7 121 aa8.71□□□□□ -1.02
VAMP1-207ENST00000539047 FP248Q71RG6 208 aaPredicted RBP8.71□□□□□ -1.02
VAMP1-207ENST00000539047 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.02
VAMP1-207ENST00000539047 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
VAMP1-207ENST00000539047 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
VAMP1-207ENST00000539047 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
VAMP1-207ENST00000539047 A0A087WVE0 104 aa8.65□□□□□ -1.02
VAMP1-207ENST00000539047 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.02
VAMP1-207ENST00000539047 LINC00313P59037 77 aa8.64□□□□□ -1.03
VAMP1-207ENST00000539047 PRR4Q16378 134 aa8.63□□□□□ -1.03
VAMP1-207ENST00000539047 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
VAMP1-207ENST00000539047 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
VAMP1-207ENST00000539047 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
VAMP1-207ENST00000539047 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
VAMP1-207ENST00000539047 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
VAMP1-207ENST00000539047 hDV103S1A0JD37 113 aa8.61□□□□□ -1.03
VAMP1-207ENST00000539047 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
VAMP1-207ENST00000539047 KRTAP4-8Q9BYQ9 185 aa8.61□□□□□ -1.03
VAMP1-207ENST00000539047 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
VAMP1-207ENST00000539047 XP32Q5T750 250 aa8.6□□□□□ -1.03
VAMP1-207ENST00000539047 TMEM254Q8TBM7 123 aa8.58□□□□□ -1.04
VAMP1-207ENST00000539047 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
VAMP1-207ENST00000539047 TNXBP22105 4242 aa8.56□□□□□ -1.04
VAMP1-207ENST00000539047 C9orf92A6NGG3 77 aa8.55□□□□□ -1.04
VAMP1-207ENST00000539047 MRPL34Q9BQ48 92 aaKnown RBP8.55□□□□□ -1.04
VAMP1-207ENST00000539047 ATOX1O00244 68 aa8.54□□□□□ -1.04
VAMP1-207ENST00000539047 NDUFS5O43920 106 aa8.53□□□□□ -1.04
VAMP1-207ENST00000539047 NOTCH2NLQ7Z3S9 236 aa8.52□□□□□ -1.05
VAMP1-207ENST00000539047 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
VAMP1-207ENST00000539047 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
VAMP1-207ENST00000539047 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
VAMP1-207ENST00000539047 KRTAP13-3Q3SY46 172 aa8.48□□□□□ -1.05
VAMP1-207ENST00000539047 TP53AIP1Q9HCN2 124 aa8.48□□□□□ -1.05
VAMP1-207ENST00000539047 KRTAP16-1A8MUX0 517 aa8.46□□□□□ -1.06
VAMP1-207ENST00000539047 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
VAMP1-207ENST00000539047 Q8N9P0 234 aaPredicted RBP8.44□□□□□ -1.06
VAMP1-207ENST00000539047 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
VAMP1-207ENST00000539047 LRP2P98164 4655 aa8.42□□□□□ -1.06
VAMP1-207ENST00000539047 TRAV7A0A075B6U4 112 aa8.42□□□□□ -1.06
VAMP1-207ENST00000539047 UQCRQO14949 82 aa8.42□□□□□ -1.06
VAMP1-207ENST00000539047 KRTAP9-6A0A140TA67 174 aa8.41□□□□□ -1.06
VAMP1-207ENST00000539047 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
VAMP1-207ENST00000539047 Q75L30 129 aa8.4□□□□□ -1.06
VAMP1-207ENST00000539047 OCR1Q9BZK8 76 aa8.4□□□□□ -1.06
VAMP1-207ENST00000539047 A8MUU9 505 aa8.39□□□□□ -1.07
VAMP1-207ENST00000539047 SERP2Q8N6R1 65 aa8.39□□□□□ -1.07
VAMP1-207ENST00000539047 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
VAMP1-207ENST00000539047 MP68P56378 58 aa8.36□□□□□ -1.07
VAMP1-207ENST00000539047 RPL37P61927 97 aaKnown RBP8.35□□□□□ -1.07
VAMP1-207ENST00000539047 ATP11AUNQ6ZP68 121 aa8.35□□□□□ -1.07
VAMP1-207ENST00000539047 C5orf47Q569G3 176 aa8.34□□□□□ -1.07
VAMP1-207ENST00000539047 H0Y9P7 68 aa8.33□□□□□ -1.08
VAMP1-207ENST00000539047 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
VAMP1-207ENST00000539047 COX7CP15954 63 aa8.31□□□□□ -1.08
VAMP1-207ENST00000539047 H3BPC8 53 aa8.29□□□□□ -1.08
VAMP1-207ENST00000539047 RNF213Q63HN8 5207 aa8.29□□□□□ -1.08
VAMP1-207ENST00000539047 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
VAMP1-207ENST00000539047 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
VAMP1-207ENST00000539047 Q5W150 140 aa8.24□□□□□ -1.09
VAMP1-207ENST00000539047 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
VAMP1-207ENST00000539047 C20orf197Q8N268 126 aa8.23□□□□□ -1.09
VAMP1-207ENST00000539047 C1orf64Q8NEQ6 169 aa8.23□□□□□ -1.09
VAMP1-207ENST00000539047 LPAP08519 4548 aa8.21□□□□□ -1.1
VAMP1-207ENST00000539047 PCP4P48539 62 aa8.2□□□□□ -1.1
VAMP1-207ENST00000539047 C7orf65Q6ZTY9 151 aa8.2□□□□□ -1.1
VAMP1-207ENST00000539047 IGKV2D-30A0A075B6S6 120 aa8.19□□□□□ -1.1
VAMP1-207ENST00000539047 IGKV2-30P06310 120 aa8.19□□□□□ -1.1
VAMP1-207ENST00000539047 PCOTHQ58A44 107 aa8.19□□□□□ -1.1
VAMP1-207ENST00000539047 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
VAMP1-207ENST00000539047 SNURFQ9Y675 71 aa8.17□□□□□ -1.1
VAMP1-207ENST00000539047 KLKP1Q107X0 134 aa8.16□□□□□ -1.1
VAMP1-207ENST00000539047 CCDC179H3BU77 68 aa8.14□□□□□ -1.11
VAMP1-207ENST00000539047 LCE3BQ5TA77 95 aa8.14□□□□□ -1.11
VAMP1-207ENST00000539047 NDUFC1O43677 76 aa8.13□□□□□ -1.11
VAMP1-207ENST00000539047 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
VAMP1-207ENST00000539047 SPINK7P58062 85 aa8.11□□□□□ -1.11
VAMP1-207ENST00000539047 KRTAP4-12Q9BQ66 201 aa8.09□□□□□ -1.11
VAMP1-207ENST00000539047 KRTAP9-9Q9BYP9 154 aa8.04□□□□□ -1.12
VAMP1-207ENST00000539047 KRTAP9-4Q9BYQ2 154 aa8.04□□□□□ -1.12
VAMP1-207ENST00000539047 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
VAMP1-207ENST00000539047 H7BZZ5 65 aa7.99□□□□□ -1.13
VAMP1-207ENST00000539047 HRES1P13985 223 aa7.99□□□□□ -1.13
VAMP1-207ENST00000539047 CYSTM1Q9H1C7 97 aa7.98□□□□□ -1.13
VAMP1-207ENST00000539047 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
VAMP1-207ENST00000539047 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
VAMP1-207ENST00000539047 TMEM258P61165 79 aa7.96□□□□□ -1.14
VAMP1-207ENST00000539047 MUC2Q02817 5179 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms