RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 A0A1B0GVX0 72 aa12.91□□□□□ -0.34
TMEM260-202ENST00000538838 IGKV3D-7A0A0C4DH55 119 aa12.9□□□□□ -0.34
TMEM260-202ENST00000538838 LRP2P98164 4655 aa12.89□□□□□ -0.35
TMEM260-202ENST00000538838 CDIP1Q9H305 208 aa12.88□□□□□ -0.35
TMEM260-202ENST00000538838 NDUFB1O75438 58 aa12.88□□□□□ -0.35
TMEM260-202ENST00000538838 K7EQZ3 153 aa12.87□□□□□ -0.35
TMEM260-202ENST00000538838 NOTCH2NLQ7Z3S9 236 aa12.85□□□□□ -0.35
TMEM260-202ENST00000538838 K7ERU9 68 aa12.84□□□□□ -0.35
TMEM260-202ENST00000538838 Q8N9L7 120 aa12.84□□□□□ -0.35
TMEM260-202ENST00000538838 PRR15Q8IV56 129 aa12.84□□□□□ -0.35
TMEM260-202ENST00000538838 XP32Q5T750 250 aa12.83□□□□□ -0.36
TMEM260-202ENST00000538838 LINC00313P59037 77 aa12.82□□□□□ -0.36
TMEM260-202ENST00000538838 CXCL6P80162 114 aa12.8□□□□□ -0.36
TMEM260-202ENST00000538838 C8orf87E5RJ46 101 aa12.8□□□□□ -0.36
TMEM260-202ENST00000538838 LINC00643Q86TS7 51 aa12.77□□□□□ -0.36
TMEM260-202ENST00000538838 C8orf17Q9NRJ1 99 aa12.77□□□□□ -0.36
TMEM260-202ENST00000538838 KRTAP16-1A8MUX0 517 aa12.75□□□□□ -0.37
TMEM260-202ENST00000538838 ATP5EP2Q5VTU8 51 aa12.75□□□□□ -0.37
TMEM260-202ENST00000538838 MMP24-AS1A0A0U1RRL7 71 aa12.73□□□□□ -0.37
TMEM260-202ENST00000538838 C20orf166-AS1Q96NR2 134 aa12.66□□□□□ -0.38
TMEM260-202ENST00000538838 RPL37P61927 97 aaKnown RBP12.65□□□□□ -0.38
TMEM260-202ENST00000538838 WFDC13Q8IUB5 93 aa12.65□□□□□ -0.38
TMEM260-202ENST00000538838 hDV103S1A0JD37 113 aa12.64□□□□□ -0.39
TMEM260-202ENST00000538838 A8MUU9 505 aa12.63□□□□□ -0.39
TMEM260-202ENST00000538838 Q75L30 129 aa12.63□□□□□ -0.39
TMEM260-202ENST00000538838 HIST1H4AP62805 103 aaKnown RBP12.62□□□□□ -0.39
TMEM260-202ENST00000538838 TMEM254Q8TBM7 123 aa12.62□□□□□ -0.39
TMEM260-202ENST00000538838 HCG22E2RYF7 251 aa12.61□□□□□ -0.39
TMEM260-202ENST00000538838 CASC2Q6XLA1 102 aa12.61□□□□□ -0.39
TMEM260-202ENST00000538838 UBR4Q5T4S7 5183 aa12.6□□□□□ -0.39
TMEM260-202ENST00000538838 MRPL34Q9BQ48 92 aaKnown RBP12.59□□□□□ -0.39
TMEM260-202ENST00000538838 Q8N9P0 234 aaPredicted RBP12.56□□□□□ -0.4
TMEM260-202ENST00000538838 A0A087WVE0 104 aa12.55□□□□□ -0.4
TMEM260-202ENST00000538838 SEC61BP60468 96 aaKnown RBP12.55□□□□□ -0.4
TMEM260-202ENST00000538838 MUC17Q685J3 4493 aa12.54□□□□□ -0.4
TMEM260-202ENST00000538838 PCOTHQ58A44 107 aa12.54□□□□□ -0.4
TMEM260-202ENST00000538838 MT-ATP8P03928 68 aa12.53□□□□□ -0.4
TMEM260-202ENST00000538838 NDUFS5O43920 106 aa12.49□□□□□ -0.41
TMEM260-202ENST00000538838 ATP11AUNQ6ZP68 121 aa12.49□□□□□ -0.41
TMEM260-202ENST00000538838 ZCCHC13Q8WW36 166 aaKnown RBP12.4□□□□□ -0.42
TMEM260-202ENST00000538838 IMUPQ9GZP8 106 aa12.4□□□□□ -0.42
TMEM260-202ENST00000538838 RNF213Q63HN8 5207 aa12.4□□□□□ -0.42
TMEM260-202ENST00000538838 KRTAP4-1Q9BYQ7 146 aa12.37□□□□□ -0.43
TMEM260-202ENST00000538838 Q5W150 140 aa12.3□□□□□ -0.44
TMEM260-202ENST00000538838 TP53AIP1Q9HCN2 124 aa12.29□□□□□ -0.44
TMEM260-202ENST00000538838 MUC2Q02817 5179 aa12.27□□□□□ -0.44
TMEM260-202ENST00000538838 FAM236AA0A1B0GUQ0 79 aa12.24□□□□□ -0.45
TMEM260-202ENST00000538838 FAM236BA0A1B0GV22 79 aa12.24□□□□□ -0.45
TMEM260-202ENST00000538838 SCGB1A1P11684 91 aa12.2□□□□□ -0.46
TMEM260-202ENST00000538838 OCR1Q9BZK8 76 aa12.19□□□□□ -0.46
TMEM260-202ENST00000538838 UQCRQO14949 82 aa12.17□□□□□ -0.46
TMEM260-202ENST00000538838 SPINK7P58062 85 aa12.15□□□□□ -0.46
TMEM260-202ENST00000538838 TRAV22A0A0B4J277 110 aa12.15□□□□□ -0.47
TMEM260-202ENST00000538838 IGKV2D-30A0A075B6S6 120 aa12.12□□□□□ -0.47
TMEM260-202ENST00000538838 IGKV2-30P06310 120 aa12.12□□□□□ -0.47
TMEM260-202ENST00000538838 H0Y9P7 68 aa12.08□□□□□ -0.48
TMEM260-202ENST00000538838 C7orf65Q6ZTY9 151 aa12.08□□□□□ -0.48
TMEM260-202ENST00000538838 HRES1P13985 223 aa12.05□□□□□ -0.48
TMEM260-202ENST00000538838 ATOX1O00244 68 aa12.04□□□□□ -0.48
TMEM260-202ENST00000538838 PCP4P48539 62 aa12.01□□□□□ -0.49
TMEM260-202ENST00000538838 SMIM20Q8N5G0 67 aa12.01□□□□□ -0.49
TMEM260-202ENST00000538838 TRAV7A0A075B6U4 112 aa12□□□□□ -0.49
TMEM260-202ENST00000538838 C5orf47Q569G3 176 aa11.98□□□□□ -0.49
TMEM260-202ENST00000538838 LOC101927531A0A1B0GV80 90 aa11.97□□□□□ -0.49
TMEM260-202ENST00000538838 MP68P56378 58 aa11.97□□□□□ -0.49
TMEM260-202ENST00000538838 KRTAP19-2Q3LHN2 52 aa11.97□□□□□ -0.49
TMEM260-202ENST00000538838 MPLKIPQ8TAP9 179 aa11.96□□□□□ -0.5
TMEM260-202ENST00000538838 LINC00208Q96KT6 92 aa11.95□□□□□ -0.5
TMEM260-202ENST00000538838 C1orf64Q8NEQ6 169 aa11.93□□□□□ -0.5
TMEM260-202ENST00000538838 CYP4F30PQ9H0H9 118 aa11.93□□□□□ -0.5
TMEM260-202ENST00000538838 A0A0U1RQV1 116 aa11.9□□□□□ -0.5
TMEM260-202ENST00000538838 RBM12B-AS1Q9P1G2 102 aa11.9□□□□□ -0.5
TMEM260-202ENST00000538838 FAT4Q6V0I7 4981 aa11.9□□□□□ -0.5
TMEM260-202ENST00000538838 COX6B2Q6YFQ2 88 aa11.89□□□□□ -0.51
TMEM260-202ENST00000538838 SERP2Q8N6R1 65 aa11.88□□□□□ -0.51
TMEM260-202ENST00000538838 H3BPC8 53 aa11.87□□□□□ -0.51
TMEM260-202ENST00000538838 LCE2CQ5TA81 110 aa11.87□□□□□ -0.51
TMEM260-202ENST00000538838 FAM236DA0A1B0GTK5 79 aa11.85□□□□□ -0.51
TMEM260-202ENST00000538838 FAM236CP0DP71 79 aa11.85□□□□□ -0.51
TMEM260-202ENST00000538838 C4orf26Q17RF5 130 aa11.83□□□□□ -0.52
TMEM260-202ENST00000538838 KLKP1Q107X0 134 aa11.79□□□□□ -0.52
TMEM260-202ENST00000538838 ANAPC13Q9BS18 74 aa11.74□□□□□ -0.53
TMEM260-202ENST00000538838 C20orf197Q8N268 126 aa11.73□□□□□ -0.53
TMEM260-202ENST00000538838 SNURFQ9Y675 71 aa11.73□□□□□ -0.53
TMEM260-202ENST00000538838 COX7CP15954 63 aa11.72□□□□□ -0.53
TMEM260-202ENST00000538838 MT1HP80294 61 aa11.68□□□□□ -0.54
TMEM260-202ENST00000538838 KRTAP3-1Q9BYR8 98 aa11.67□□□□□ -0.54
TMEM260-202ENST00000538838 FLGP20930 4061 aaPredicted RBP11.67□□□□□ -0.54
TMEM260-202ENST00000538838 H1FX-AS1Q4G0G2 97 aa11.63□□□□□ -0.55
TMEM260-202ENST00000538838 LCE2AQ5TA79 106 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-202ENST00000538838 M0R2T5 61 aa11.51□□□□□ -0.57
TMEM260-202ENST00000538838 CYSTM1Q9H1C7 97 aa11.5□□□□□ -0.57
TMEM260-202ENST00000538838 CCDC179H3BU77 68 aa11.49□□□□□ -0.57
TMEM260-202ENST00000538838 A8MUN3 132 aa11.47□□□□□ -0.57
TMEM260-202ENST00000538838 DMAC1Q96GE9 116 aa11.45□□□□□ -0.58
TMEM260-202ENST00000538838 S4R3F8 94 aa11.43□□□□□ -0.58
TMEM260-202ENST00000538838 H7BZZ5 65 aa11.39□□□□□ -0.59
TMEM260-202ENST00000538838 NDUFC1O43677 76 aa11.39□□□□□ -0.59
TMEM260-202ENST00000538838 SPANXA2-OT1Q8N9U9 137 aa11.39□□□□□ -0.59
TMEM260-202ENST00000538838 LCA10Q71F78 164 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms