RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MP68P56378 58 aa4.12□□□□□ -1.75
MSH6-209ENST00000538136 KRTAP13-1Q8IUC0 172 aa4.12□□□□□ -1.75
MSH6-209ENST00000538136 ACYP1P07311 99 aa4.11□□□□□ -1.75
MSH6-209ENST00000538136 DYNC2H1Q8NCM8 4307 aaKnown RBP4.1□□□□□ -1.75
MSH6-209ENST00000538136 HERC1Q15751 4861 aa4.1□□□□□ -1.75
MSH6-209ENST00000538136 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
MSH6-209ENST00000538136 A0A1B0GVX0 72 aa4.09□□□□□ -1.75
MSH6-209ENST00000538136 LINC00643Q86TS7 51 aa4.09□□□□□ -1.75
MSH6-209ENST00000538136 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.76
MSH6-209ENST00000538136 LRP2P98164 4655 aa4.08□□□□□ -1.76
MSH6-209ENST00000538136 ABCA13Q86UQ4 5058 aa4.08□□□□□ -1.76
MSH6-209ENST00000538136 C4orf26Q17RF5 130 aa4.08□□□□□ -1.76
MSH6-209ENST00000538136 J3KT08 172 aa4.07□□□□□ -1.76
MSH6-209ENST00000538136 A8MWP4 228 aa4.07□□□□□ -1.76
MSH6-209ENST00000538136 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
MSH6-209ENST00000538136 PRR15Q8IV56 129 aa4.06□□□□□ -1.76
MSH6-209ENST00000538136 MRPL34Q9BQ48 92 aaKnown RBP4.06□□□□□ -1.76
MSH6-209ENST00000538136 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
MSH6-209ENST00000538136 SEC61BP60468 96 aaKnown RBP4.05□□□□□ -1.76
MSH6-209ENST00000538136 LINC00483Q53H64 154 aa4.05□□□□□ -1.76
MSH6-209ENST00000538136 DNAH17Q9UFH2 4485 aa4.05□□□□□ -1.76
MSH6-209ENST00000538136 SPRR1BP22528 89 aa4.05□□□□□ -1.76
MSH6-209ENST00000538136 KRTAP10-8P60410 259 aa4.05□□□□□ -1.76
MSH6-209ENST00000538136 FSIP2Q5CZC0 6907 aa4.05□□□□□ -1.76
MSH6-209ENST00000538136 H0Y9P7 68 aa4.04□□□□□ -1.76
MSH6-209ENST00000538136 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
MSH6-209ENST00000538136 MT1HL1P0DM35 61 aa4.04□□□□□ -1.76
MSH6-209ENST00000538136 ALMS1Q8TCU4 4167 aa4.03□□□□□ -1.76
MSH6-209ENST00000538136 LOC110117498A0A087WWA1 95 aa4.03□□□□□ -1.76
MSH6-209ENST00000538136 C1orf64Q8NEQ6 169 aa4.01□□□□□ -1.77
MSH6-209ENST00000538136 SPINK7P58062 85 aa4.01□□□□□ -1.77
MSH6-209ENST00000538136 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
MSH6-209ENST00000538136 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
MSH6-209ENST00000538136 CD164Q04900 197 aa4□□□□□ -1.77
MSH6-209ENST00000538136 FAT2Q9NYQ8 4349 aa4□□□□□ -1.77
MSH6-209ENST00000538136 RBM12B-AS1Q9P1G2 102 aa4□□□□□ -1.77
MSH6-209ENST00000538136 LINC00472Q9H8W2 130 aa3.99□□□□□ -1.77
MSH6-209ENST00000538136 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
MSH6-209ENST00000538136 TMEM254Q8TBM7 123 aa3.99□□□□□ -1.77
MSH6-209ENST00000538136 UQCRQO14949 82 aa3.98□□□□□ -1.77
MSH6-209ENST00000538136 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
MSH6-209ENST00000538136 C5orf47Q569G3 176 aa3.98□□□□□ -1.77
MSH6-209ENST00000538136 HSPG2P98160 4391 aa3.97□□□□□ -1.77
MSH6-209ENST00000538136 FAM240AA0A1B0GVK7 77 aa3.97□□□□□ -1.77
MSH6-209ENST00000538136 C8orf87E5RJ46 101 aa3.97□□□□□ -1.77
MSH6-209ENST00000538136 Q8N9P0 234 aaPredicted RBP3.97□□□□□ -1.77
MSH6-209ENST00000538136 XP32Q5T750 250 aa3.96□□□□□ -1.77
MSH6-209ENST00000538136 IMUPQ9GZP8 106 aa3.96□□□□□ -1.78
MSH6-209ENST00000538136 TRAV22A0A0B4J277 110 aa3.96□□□□□ -1.78
MSH6-209ENST00000538136 FP248Q71RG6 208 aaPredicted RBP3.95□□□□□ -1.78
MSH6-209ENST00000538136 COX7CP15954 63 aa3.95□□□□□ -1.78
MSH6-209ENST00000538136 ATP5EP2Q5VTU8 51 aa3.94□□□□□ -1.78
MSH6-209ENST00000538136 ATOX1O00244 68 aa3.93□□□□□ -1.78
MSH6-209ENST00000538136 MMP24-AS1A0A0U1RRL7 71 aa3.93□□□□□ -1.78
MSH6-209ENST00000538136 CXCL6P80162 114 aa3.93□□□□□ -1.78
MSH6-209ENST00000538136 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
MSH6-209ENST00000538136 SEC61GP60059 68 aa3.92□□□□□ -1.78
MSH6-209ENST00000538136 A0A0U1RQV1 116 aa3.92□□□□□ -1.78
MSH6-209ENST00000538136 Q5W150 140 aa3.91□□□□□ -1.78
MSH6-209ENST00000538136 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
MSH6-209ENST00000538136 MUC2Q02817 5179 aa3.91□□□□□ -1.78
MSH6-209ENST00000538136 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
MSH6-209ENST00000538136 SERP2Q8N6R1 65 aa3.89□□□□□ -1.79
MSH6-209ENST00000538136 TMEM258P61165 79 aa3.88□□□□□ -1.79
MSH6-209ENST00000538136 RPS28P62857 69 aaKnown RBP3.88□□□□□ -1.79
MSH6-209ENST00000538136 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
MSH6-209ENST00000538136 HECTD4Q9Y4D8 3996 aa3.87□□□□□ -1.79
MSH6-209ENST00000538136 PKD1P98161 4303 aa3.87□□□□□ -1.79
MSH6-209ENST00000538136 C20orf166-AS1Q96NR2 134 aa3.87□□□□□ -1.79
MSH6-209ENST00000538136 TP53AIP1Q9HCN2 124 aa3.87□□□□□ -1.79
MSH6-209ENST00000538136 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
MSH6-209ENST00000538136 LPAP08519 4548 aa3.86□□□□□ -1.79
MSH6-209ENST00000538136 A0A1B0GW54 56 aa3.86□□□□□ -1.79
MSH6-209ENST00000538136 MPLKIPQ8TAP9 179 aa3.86□□□□□ -1.79
MSH6-209ENST00000538136 TRAV7A0A075B6U4 112 aa3.84□□□□□ -1.8
MSH6-209ENST00000538136 NDUFC1O43677 76 aa3.83□□□□□ -1.8
MSH6-209ENST00000538136 HRES1P13985 223 aa3.83□□□□□ -1.8
MSH6-209ENST00000538136 Q5XG85 94 aa3.81□□□□□ -1.8
MSH6-209ENST00000538136 LOC101927531A0A1B0GV80 90 aa3.81□□□□□ -1.8
MSH6-209ENST00000538136 V9GYY9 64 aa3.8□□□□□ -1.8
MSH6-209ENST00000538136 A0A0D9SG42 100 aa3.8□□□□□ -1.8
MSH6-209ENST00000538136 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
MSH6-209ENST00000538136 Q75L30 129 aa3.8□□□□□ -1.8
MSH6-209ENST00000538136 SERP1Q9Y6X1 66 aa3.8□□□□□ -1.8
MSH6-209ENST00000538136 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
MSH6-209ENST00000538136 CYP4F30PQ9H0H9 118 aa3.78□□□□□ -1.8
MSH6-209ENST00000538136 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
MSH6-209ENST00000538136 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
MSH6-209ENST00000538136 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
MSH6-209ENST00000538136 CSAG1Q6PB30 78 aa3.77□□□□□ -1.81
MSH6-209ENST00000538136 H7BZZ5 65 aa3.76□□□□□ -1.81
MSH6-209ENST00000538136 S4R3F8 94 aa3.76□□□□□ -1.81
MSH6-209ENST00000538136 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
MSH6-209ENST00000538136 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
MSH6-209ENST00000538136 A8MUU9 505 aa3.75□□□□□ -1.81
MSH6-209ENST00000538136 ACYP2P14621 99 aa3.75□□□□□ -1.81
MSH6-209ENST00000538136 ASB16-AS1Q495Z4 193 aa3.75□□□□□ -1.81
MSH6-209ENST00000538136 OCR1Q9BZK8 76 aa3.74□□□□□ -1.81
MSH6-209ENST00000538136 PSPHP1O15172 72 aa3.73□□□□□ -1.81
MSH6-209ENST00000538136 KLKP1Q107X0 134 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms