RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 HIST1H4AP62805 103 aaKnown RBP6.56□□□□□ -1.36
SPARC-207ENST00000537849 RETNLBQ9BQ08 111 aa6.56□□□□□ -1.36
SPARC-207ENST00000537849 A0A087WVE0 104 aa6.55□□□□□ -1.36
SPARC-207ENST00000537849 NDUFB1O75438 58 aa6.55□□□□□ -1.36
SPARC-207ENST00000537849 J3QL48 77 aa6.54□□□□□ -1.36
SPARC-207ENST00000537849 NOTCH2NLQ7Z3S9 236 aa6.54□□□□□ -1.36
SPARC-207ENST00000537849 IGHV6-1A0A0B4J1U7 121 aa6.52□□□□□ -1.37
SPARC-207ENST00000537849 MMP24-AS1A0A0U1RRL7 71 aa6.51□□□□□ -1.37
SPARC-207ENST00000537849 C8orf17Q9NRJ1 99 aa6.51□□□□□ -1.37
SPARC-207ENST00000537849 PCLOQ9Y6V0 5065 aa6.51□□□□□ -1.37
SPARC-207ENST00000537849 FP248Q71RG6 208 aaPredicted RBP6.5□□□□□ -1.37
SPARC-207ENST00000537849 C8orf87E5RJ46 101 aa6.49□□□□□ -1.37
SPARC-207ENST00000537849 LINC00313P59037 77 aa6.49□□□□□ -1.37
SPARC-207ENST00000537849 HCG22E2RYF7 251 aa6.48□□□□□ -1.37
SPARC-207ENST00000537849 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.38
SPARC-207ENST00000537849 KRTAP16-1A8MUX0 517 aa6.46□□□□□ -1.38
SPARC-207ENST00000537849 WFDC13Q8IUB5 93 aa6.46□□□□□ -1.38
SPARC-207ENST00000537849 FAM236AA0A1B0GUQ0 79 aa6.45□□□□□ -1.38
SPARC-207ENST00000537849 FAM236BA0A1B0GV22 79 aa6.45□□□□□ -1.38
SPARC-207ENST00000537849 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
SPARC-207ENST00000537849 CASC2Q6XLA1 102 aa6.45□□□□□ -1.38
SPARC-207ENST00000537849 SCGB1A1P11684 91 aa6.44□□□□□ -1.38
SPARC-207ENST00000537849 TMEM254Q8TBM7 123 aa6.44□□□□□ -1.38
SPARC-207ENST00000537849 PRR4Q16378 134 aa6.43□□□□□ -1.38
SPARC-207ENST00000537849 C9orf92A6NGG3 77 aa6.42□□□□□ -1.38
SPARC-207ENST00000537849 MRPL34Q9BQ48 92 aaKnown RBP6.42□□□□□ -1.38
SPARC-207ENST00000537849 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
SPARC-207ENST00000537849 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.38
SPARC-207ENST00000537849 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
SPARC-207ENST00000537849 ATOX1O00244 68 aa6.37□□□□□ -1.39
SPARC-207ENST00000537849 A8MUU9 505 aa6.36□□□□□ -1.39
SPARC-207ENST00000537849 HERC1Q15751 4861 aa6.36□□□□□ -1.39
SPARC-207ENST00000537849 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
SPARC-207ENST00000537849 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
SPARC-207ENST00000537849 LPAP08519 4548 aa6.34□□□□□ -1.39
SPARC-207ENST00000537849 TRAV7A0A075B6U4 112 aa6.34□□□□□ -1.39
SPARC-207ENST00000537849 XP32Q5T750 250 aa6.33□□□□□ -1.4
SPARC-207ENST00000537849 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
SPARC-207ENST00000537849 NDUFS5O43920 106 aa6.32□□□□□ -1.4
SPARC-207ENST00000537849 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
SPARC-207ENST00000537849 UQCRQO14949 82 aa6.31□□□□□ -1.4
SPARC-207ENST00000537849 Q5W150 140 aa6.31□□□□□ -1.4
SPARC-207ENST00000537849 Q75L30 129 aa6.31□□□□□ -1.4
SPARC-207ENST00000537849 SERP2Q8N6R1 65 aa6.31□□□□□ -1.4
SPARC-207ENST00000537849 LRP2P98164 4655 aa6.3□□□□□ -1.4
SPARC-207ENST00000537849 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
SPARC-207ENST00000537849 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
SPARC-207ENST00000537849 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
SPARC-207ENST00000537849 COX7CP15954 63 aa6.26□□□□□ -1.41
SPARC-207ENST00000537849 C5orf47Q569G3 176 aa6.26□□□□□ -1.41
SPARC-207ENST00000537849 ZCCHC13Q8WW36 166 aaKnown RBP6.26□□□□□ -1.41
SPARC-207ENST00000537849 H0Y9P7 68 aa6.23□□□□□ -1.41
SPARC-207ENST00000537849 TRAV22A0A0B4J277 110 aa6.22□□□□□ -1.41
SPARC-207ENST00000537849 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
SPARC-207ENST00000537849 A0A0U1RQV1 116 aa6.2□□□□□ -1.42
SPARC-207ENST00000537849 CCDC179H3BU77 68 aa6.2□□□□□ -1.42
SPARC-207ENST00000537849 ATP11AUNQ6ZP68 121 aa6.2□□□□□ -1.42
SPARC-207ENST00000537849 H3BPC8 53 aa6.19□□□□□ -1.42
SPARC-207ENST00000537849 PCP4P48539 62 aa6.19□□□□□ -1.42
SPARC-207ENST00000537849 MP68P56378 58 aa6.19□□□□□ -1.42
SPARC-207ENST00000537849 LINC00208Q96KT6 92 aa6.19□□□□□ -1.42
SPARC-207ENST00000537849 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
SPARC-207ENST00000537849 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
SPARC-207ENST00000537849 C1orf64Q8NEQ6 169 aa6.17□□□□□ -1.42
SPARC-207ENST00000537849 IGKV2-30P06310 120 aa6.16□□□□□ -1.42
SPARC-207ENST00000537849 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
SPARC-207ENST00000537849 KLKP1Q107X0 134 aa6.15□□□□□ -1.42
SPARC-207ENST00000537849 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
SPARC-207ENST00000537849 LOC101927531A0A1B0GV80 90 aa6.14□□□□□ -1.43
SPARC-207ENST00000537849 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
SPARC-207ENST00000537849 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
SPARC-207ENST00000537849 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
SPARC-207ENST00000537849 SPINK7P58062 85 aa6.11□□□□□ -1.43
SPARC-207ENST00000537849 C7orf65Q6ZTY9 151 aa6.09□□□□□ -1.43
SPARC-207ENST00000537849 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
SPARC-207ENST00000537849 H7BZZ5 65 aa6.06□□□□□ -1.44
SPARC-207ENST00000537849 NDUFC1O43677 76 aa6.05□□□□□ -1.44
SPARC-207ENST00000537849 HRES1P13985 223 aa6.03□□□□□ -1.44
SPARC-207ENST00000537849 MPLKIPQ8TAP9 179 aa5.99□□□□□ -1.45
SPARC-207ENST00000537849 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
SPARC-207ENST00000537849 SPANXA2-OT1Q8N9U9 137 aa5.98□□□□□ -1.45
SPARC-207ENST00000537849 KRTAP3-1Q9BYR8 98 aa5.97□□□□□ -1.45
SPARC-207ENST00000537849 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
SPARC-207ENST00000537849 UBR4Q5T4S7 5183 aa5.94□□□□□ -1.46
SPARC-207ENST00000537849 COX6B2Q6YFQ2 88 aa5.94□□□□□ -1.46
SPARC-207ENST00000537849 TMEM258P61165 79 aa5.93□□□□□ -1.46
SPARC-207ENST00000537849 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
SPARC-207ENST00000537849 DMAC1Q96GE9 116 aa5.9□□□□□ -1.46
SPARC-207ENST00000537849 MUC2Q02817 5179 aa5.89□□□□□ -1.47
SPARC-207ENST00000537849 FAM236DA0A1B0GTK5 79 aa5.89□□□□□ -1.47
SPARC-207ENST00000537849 FAM236CP0DP71 79 aa5.89□□□□□ -1.47
SPARC-207ENST00000537849 RBM12B-AS1Q9P1G2 102 aa5.89□□□□□ -1.47
SPARC-207ENST00000537849 A8MUN3 132 aa5.87□□□□□ -1.47
SPARC-207ENST00000537849 ATP5EP56381 51 aaPredicted RBP5.87□□□□□ -1.47
SPARC-207ENST00000537849 ACYP2P14621 99 aa5.86□□□□□ -1.47
SPARC-207ENST00000537849 FLGP20930 4061 aaPredicted RBP5.85□□□□□ -1.47
SPARC-207ENST00000537849 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
SPARC-207ENST00000537849 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
SPARC-207ENST00000537849 COA5Q86WW8 74 aa5.79□□□□□ -1.48
SPARC-207ENST00000537849 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms