RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
PDXDC1-205ENST00000535621 UQCRQO14949 82 aa12.02□□□□□ -0.49
PDXDC1-205ENST00000535621 HERC2O95714 4834 aa12.02□□□□□ -0.49
PDXDC1-205ENST00000535621 TRAV7A0A075B6U4 112 aa12.01□□□□□ -0.49
PDXDC1-205ENST00000535621 WFDC13Q8IUB5 93 aa12.01□□□□□ -0.49
PDXDC1-205ENST00000535621 KRTAP29-1A8MX34 341 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-205ENST00000535621 TNXBP22105 4242 aa12□□□□□ -0.49
PDXDC1-205ENST00000535621 A0A1B0GVX0 72 aa12□□□□□ -0.49
PDXDC1-205ENST00000535621 C1orf195Q5TG92 126 aa11.99□□□□□ -0.49
PDXDC1-205ENST00000535621 OCR1Q9BZK8 76 aa11.99□□□□□ -0.49
PDXDC1-205ENST00000535621 MMP24-AS1A0A0U1RRL7 71 aa11.98□□□□□ -0.49
PDXDC1-205ENST00000535621 SPAG11AQ6PDA7 123 aa11.98□□□□□ -0.49
PDXDC1-205ENST00000535621 CASC2Q6XLA1 102 aa11.98□□□□□ -0.49
PDXDC1-205ENST00000535621 ABCA13Q86UQ4 5058 aa11.97□□□□□ -0.49
PDXDC1-205ENST00000535621 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
PDXDC1-205ENST00000535621 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-205ENST00000535621 C8orf17Q9NRJ1 99 aa11.94□□□□□ -0.5
PDXDC1-205ENST00000535621 hDV103S1A0JD37 113 aa11.92□□□□□ -0.5
PDXDC1-205ENST00000535621 NOTCH2NLQ7Z3S9 236 aa11.91□□□□□ -0.5
PDXDC1-205ENST00000535621 KRTAP10-8P60410 259 aa11.88□□□□□ -0.51
PDXDC1-205ENST00000535621 C20orf197Q8N268 126 aa11.84□□□□□ -0.51
PDXDC1-205ENST00000535621 MT1HL1P0DM35 61 aa11.83□□□□□ -0.52
PDXDC1-205ENST00000535621 CYSTM1Q9H1C7 97 aa11.82□□□□□ -0.52
PDXDC1-205ENST00000535621 C8orf87E5RJ46 101 aa11.81□□□□□ -0.52
PDXDC1-205ENST00000535621 TMEM254Q8TBM7 123 aa11.81□□□□□ -0.52
PDXDC1-205ENST00000535621 MRPL34Q9BQ48 92 aaKnown RBP11.8□□□□□ -0.52
PDXDC1-205ENST00000535621 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
PDXDC1-205ENST00000535621 LINC00313P59037 77 aa11.79□□□□□ -0.52
PDXDC1-205ENST00000535621 KLKP1Q107X0 134 aa11.77□□□□□ -0.52
PDXDC1-205ENST00000535621 SNURFQ9Y675 71 aa11.76□□□□□ -0.53
PDXDC1-205ENST00000535621 C5orf47Q569G3 176 aa11.75□□□□□ -0.53
PDXDC1-205ENST00000535621 A0A0U1RQV1 116 aa11.72□□□□□ -0.53
PDXDC1-205ENST00000535621 RETNLBQ9BQ08 111 aa11.72□□□□□ -0.53
PDXDC1-205ENST00000535621 TP53AIP1Q9HCN2 124 aa11.72□□□□□ -0.53
PDXDC1-205ENST00000535621 NDUFS5O43920 106 aa11.7□□□□□ -0.54
PDXDC1-205ENST00000535621 KRTAP16-1A8MUX0 517 aa11.69□□□□□ -0.54
PDXDC1-205ENST00000535621 OXTP01178 125 aa11.69□□□□□ -0.54
PDXDC1-205ENST00000535621 MP68P56378 58 aa11.65□□□□□ -0.54
PDXDC1-205ENST00000535621 H0Y9P7 68 aa11.65□□□□□ -0.54
PDXDC1-205ENST00000535621 Q8N9P0 234 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-205ENST00000535621 TRAV22A0A0B4J277 110 aa11.64□□□□□ -0.55
PDXDC1-205ENST00000535621 H7BZZ5 65 aa11.64□□□□□ -0.55
PDXDC1-205ENST00000535621 ZCCHC13Q8WW36 166 aaKnown RBP11.64□□□□□ -0.55
PDXDC1-205ENST00000535621 PCLOQ9Y6V0 5065 aa11.63□□□□□ -0.55
PDXDC1-205ENST00000535621 NDUFC1O43677 76 aa11.6□□□□□ -0.55
PDXDC1-205ENST00000535621 LINC00208Q96KT6 92 aa11.59□□□□□ -0.55
PDXDC1-205ENST00000535621 H3BPC8 53 aa11.59□□□□□ -0.55
PDXDC1-205ENST00000535621 TMEM258P61165 79 aa11.57□□□□□ -0.56
PDXDC1-205ENST00000535621 Q5W150 140 aa11.56□□□□□ -0.56
PDXDC1-205ENST00000535621 KRTAP13-3Q3SY46 172 aa11.54□□□□□ -0.56
PDXDC1-205ENST00000535621 C1orf64Q8NEQ6 169 aa11.54□□□□□ -0.56
PDXDC1-205ENST00000535621 C9orf92A6NGG3 77 aa11.52□□□□□ -0.56
PDXDC1-205ENST00000535621 J3QL48 77 aa11.52□□□□□ -0.56
PDXDC1-205ENST00000535621 FP248Q71RG6 208 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-205ENST00000535621 FAM236DA0A1B0GTK5 79 aa11.43□□□□□ -0.58
PDXDC1-205ENST00000535621 FAM236CP0DP71 79 aa11.43□□□□□ -0.58
PDXDC1-205ENST00000535621 C20orf166-AS1Q96NR2 134 aa11.43□□□□□ -0.58
PDXDC1-205ENST00000535621 A8MUU9 505 aa11.41□□□□□ -0.58
PDXDC1-205ENST00000535621 LOC101927531A0A1B0GV80 90 aa11.4□□□□□ -0.58
PDXDC1-205ENST00000535621 IGLV7-46A0A075B6I9 117 aa11.39□□□□□ -0.59
PDXDC1-205ENST00000535621 PRR4Q16378 134 aa11.38□□□□□ -0.59
PDXDC1-205ENST00000535621 ATP5EP56381 51 aaPredicted RBP11.35□□□□□ -0.59
PDXDC1-205ENST00000535621 CYP4F30PQ9H0H9 118 aa11.35□□□□□ -0.59
PDXDC1-205ENST00000535621 PCOTHQ58A44 107 aa11.34□□□□□ -0.59
PDXDC1-205ENST00000535621 LPAP08519 4548 aa11.34□□□□□ -0.59
PDXDC1-205ENST00000535621 RPS28P62857 69 aaKnown RBP11.33□□□□□ -0.6
PDXDC1-205ENST00000535621 SVIPQ8NHG7 77 aa11.33□□□□□ -0.6
PDXDC1-205ENST00000535621 HERC1Q15751 4861 aa11.33□□□□□ -0.6
PDXDC1-205ENST00000535621 IGKV2-30P06310 120 aa11.31□□□□□ -0.6
PDXDC1-205ENST00000535621 Q75L30 129 aa11.31□□□□□ -0.6
PDXDC1-205ENST00000535621 SPANXA2-OT1Q8N9U9 137 aa11.3□□□□□ -0.6
PDXDC1-205ENST00000535621 XP32Q5T750 250 aa11.24□□□□□ -0.61
PDXDC1-205ENST00000535621 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
PDXDC1-205ENST00000535621 SERP1Q9Y6X1 66 aa11.21□□□□□ -0.62
PDXDC1-205ENST00000535621 LRP2P98164 4655 aa11.19□□□□□ -0.62
PDXDC1-205ENST00000535621 TPRXLQ17RH7 258 aa11.18□□□□□ -0.62
PDXDC1-205ENST00000535621 RPL37P61927 97 aaKnown RBP11.18□□□□□ -0.62
PDXDC1-205ENST00000535621 C7orf65Q6ZTY9 151 aa11.17□□□□□ -0.62
PDXDC1-205ENST00000535621 HRES1P13985 223 aa11.16□□□□□ -0.62
PDXDC1-205ENST00000535621 ATP11AUNQ6ZP68 121 aa11.13□□□□□ -0.63
PDXDC1-205ENST00000535621 HMCN2Q8NDA2 5059 aa11.1□□□□□ -0.63
PDXDC1-205ENST00000535621 SPINK7P58062 85 aa11.06□□□□□ -0.64
PDXDC1-205ENST00000535621 DMAC1Q96GE9 116 aa11.01□□□□□ -0.65
PDXDC1-205ENST00000535621 COA5Q86WW8 74 aa10.97□□□□□ -0.65
PDXDC1-205ENST00000535621 C4orf26Q17RF5 130 aa10.96□□□□□ -0.66
PDXDC1-205ENST00000535621 ACYP2P14621 99 aa10.94□□□□□ -0.66
PDXDC1-205ENST00000535621 SMIM26A0A096LP01 95 aa10.92□□□□□ -0.66
PDXDC1-205ENST00000535621 A8MUN3 132 aa10.84□□□□□ -0.67
PDXDC1-205ENST00000535621 KRTAP3-1Q9BYR8 98 aa10.83□□□□□ -0.68
PDXDC1-205ENST00000535621 MUC17Q685J3 4493 aa10.8□□□□□ -0.68
PDXDC1-205ENST00000535621 COX6B2Q6YFQ2 88 aa10.79□□□□□ -0.68
PDXDC1-205ENST00000535621 SEC61BP60468 96 aaKnown RBP10.76□□□□□ -0.69
PDXDC1-205ENST00000535621 MPLKIPQ8TAP9 179 aa10.76□□□□□ -0.69
PDXDC1-205ENST00000535621 CHKB-CPT1BH3BT56 60 aa10.75□□□□□ -0.69
PDXDC1-205ENST00000535621 KRTAP4-1Q9BYQ7 146 aa10.74□□□□□ -0.69
PDXDC1-205ENST00000535621 Q1T7F1 81 aa10.71□□□□□ -0.69
PDXDC1-205ENST00000535621 UBR4Q5T4S7 5183 aa10.68□□□□□ -0.7
PDXDC1-205ENST00000535621 MUC2Q02817 5179 aa10.67□□□□□ -0.7
PDXDC1-205ENST00000535621 V9GYY9 64 aa10.62□□□□□ -0.71
PDXDC1-205ENST00000535621 LINC01558Q9Y6Z2 57 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms