RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 BAHCC1Q9P281 2608 aa6.98□□□□□ -1.29
SPG11-203ENST00000535302 BOD1L1Q8NFC6 3051 aa6.98□□□□□ -1.29
SPG11-203ENST00000535302 A6NN06 94 aa6.97□□□□□ -1.29
SPG11-203ENST00000535302 ASH1LQ9NR48 2969 aaKnown RBP6.95□□□□□ -1.3
SPG11-203ENST00000535302 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
SPG11-203ENST00000535302 ATMQ13315 3056 aa6.95□□□□□ -1.3
SPG11-203ENST00000535302 UBR5O95071 2799 aaPredicted RBP6.94□□□□□ -1.3
SPG11-203ENST00000535302 TACC2O95359 2948 aa6.94□□□□□ -1.3
SPG11-203ENST00000535302 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
SPG11-203ENST00000535302 USP34Q70CQ2 3546 aa6.92□□□□□ -1.3
SPG11-203ENST00000535302 ASPMQ8IZT6 3477 aa6.91□□□□□ -1.3
SPG11-203ENST00000535302 RPS29P62273 56 aaKnown RBP6.91□□□□□ -1.3
SPG11-203ENST00000535302 ITPR2Q14571 2701 aa6.9□□□□□ -1.31
SPG11-203ENST00000535302 COL12A1Q99715 3063 aa6.89□□□□□ -1.31
SPG11-203ENST00000535302 APCP25054 2843 aa6.88□□□□□ -1.31
SPG11-203ENST00000535302 FRYLO94915 3013 aa6.88□□□□□ -1.31
SPG11-203ENST00000535302 WDFY3Q8IZQ1 3526 aa6.87□□□□□ -1.31
SPG11-203ENST00000535302 DCHS1Q96JQ0 3298 aa6.86□□□□□ -1.31
SPG11-203ENST00000535302 ITPR1Q14643 2758 aa6.85□□□□□ -1.31
SPG11-203ENST00000535302 ADGRG4Q8IZF6 3080 aa6.83□□□□□ -1.32
SPG11-203ENST00000535302 HIVEP1P15822 2718 aa6.82□□□□□ -1.32
SPG11-203ENST00000535302 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
SPG11-203ENST00000535302 NSD1Q96L73 2696 aaPredicted RBP6.81□□□□□ -1.32
SPG11-203ENST00000535302 LOC400499M0QZD8 3231 aa6.81□□□□□ -1.32
SPG11-203ENST00000535302 NBEAQ8NFP9 2946 aa6.8□□□□□ -1.32
SPG11-203ENST00000535302 EYSQ5T1H1 3165 aa6.8□□□□□ -1.32
SPG11-203ENST00000535302 KMT2BQ9UMN6 2715 aaPredicted RBP6.77□□□□□ -1.33
SPG11-203ENST00000535302 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
SPG11-203ENST00000535302 ZZEF1O43149 2961 aa6.73□□□□□ -1.33
SPG11-203ENST00000535302 XP32Q5T750 250 aa6.72□□□□□ -1.33
SPG11-203ENST00000535302 KRTAP1-4P0C5Y4 121 aa6.69□□□□□ -1.34
SPG11-203ENST00000535302 TNRC18O15417 2968 aaPredicted RBP6.64□□□□□ -1.35
SPG11-203ENST00000535302 FLNCQ14315 2725 aa6.63□□□□□ -1.35
SPG11-203ENST00000535302 H0YAA0 97 aa6.63□□□□□ -1.35
SPG11-203ENST00000535302 P0C880 135 aa6.6□□□□□ -1.35
SPG11-203ENST00000535302 CELSR2Q9HCU4 2923 aa6.6□□□□□ -1.35
SPG11-203ENST00000535302 ZFHX4Q86UP3 3567 aa6.6□□□□□ -1.35
SPG11-203ENST00000535302 LAMA5O15230 3695 aa6.59□□□□□ -1.35
SPG11-203ENST00000535302 DMXL1Q9Y485 3027 aa6.59□□□□□ -1.35
SPG11-203ENST00000535302 CSMD1Q96PZ7 3565 aa6.59□□□□□ -1.35
SPG11-203ENST00000535302 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
SPG11-203ENST00000535302 TENM4Q6N022 2769 aa6.54□□□□□ -1.36
SPG11-203ENST00000535302 NBPF19A0A087WUL8 3843 aa6.52□□□□□ -1.37
SPG11-203ENST00000535302 DCHS2Q6V1P9 2916 aa6.51□□□□□ -1.37
SPG11-203ENST00000535302 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
SPG11-203ENST00000535302 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
SPG11-203ENST00000535302 RELNP78509 3460 aa6.47□□□□□ -1.37
SPG11-203ENST00000535302 CELSR1Q9NYQ6 3014 aa6.46□□□□□ -1.38
SPG11-203ENST00000535302 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
SPG11-203ENST00000535302 KRTAP13-3Q3SY46 172 aa6.43□□□□□ -1.38
SPG11-203ENST00000535302 HRNRQ86YZ3 2850 aaPredicted RBP6.42□□□□□ -1.38
SPG11-203ENST00000535302 ZANQ9Y493 2812 aa6.41□□□□□ -1.38
SPG11-203ENST00000535302 FBN2P35556 2912 aa6.37□□□□□ -1.39
SPG11-203ENST00000535302 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
SPG11-203ENST00000535302 NIPBLQ6KC79 2804 aaeCLIP6.35□□□□□ -1.39
SPG11-203ENST00000535302 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
SPG11-203ENST00000535302 TENM1Q9UKZ4 2725 aa6.3□□□□□ -1.4
SPG11-203ENST00000535302 NF1P21359 2839 aa6.3□□□□□ -1.4
SPG11-203ENST00000535302 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
SPG11-203ENST00000535302 CUBNO60494 3623 aa6.27□□□□□ -1.41
SPG11-203ENST00000535302 SMG1Q96Q15 3661 aaKnown RBP6.26□□□□□ -1.41
SPG11-203ENST00000535302 SPENQ96T58 3664 aaKnown RBP6.23□□□□□ -1.41
SPG11-203ENST00000535302 DMDP11532 3685 aa6.21□□□□□ -1.42
SPG11-203ENST00000535302 TGP01266 2768 aa6.2□□□□□ -1.42
SPG11-203ENST00000535302 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
SPG11-203ENST00000535302 SVEP1Q4LDE5 3571 aa6.15□□□□□ -1.42
SPG11-203ENST00000535302 TENM3Q9P273 2699 aa6.12□□□□□ -1.43
SPG11-203ENST00000535302 PKD1L1Q8TDX9 2849 aa6.12□□□□□ -1.43
SPG11-203ENST00000535302 VWFP04275 2813 aa6.11□□□□□ -1.43
SPG11-203ENST00000535302 MXRA5Q9NR99 2828 aa6.07□□□□□ -1.44
SPG11-203ENST00000535302 KRTAP12-1P59990 96 aa6.06□□□□□ -1.44
SPG11-203ENST00000535302 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
SPG11-203ENST00000535302 PDZD2O15018 2839 aa6.04□□□□□ -1.44
SPG11-203ENST00000535302 ZFHX3Q15911 3703 aa6.04□□□□□ -1.44
SPG11-203ENST00000535302 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
SPG11-203ENST00000535302 ANK3Q12955 4377 aaKnown RBP6□□□□□ -1.45
SPG11-203ENST00000535302 CSMD2Q7Z408 3487 aa5.98□□□□□ -1.45
SPG11-203ENST00000535302 MUC3AQ02505 3323 aa5.93□□□□□ -1.46
SPG11-203ENST00000535302 FBN1P35555 2871 aaKnown RBP5.84□□□□□ -1.47
SPG11-203ENST00000535302 CSMD3Q7Z407 3707 aa5.8□□□□□ -1.48
SPG11-203ENST00000535302 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
SPG11-203ENST00000535302 KRTAP4-5Q9BYR2 181 aa5.79□□□□□ -1.48
SPG11-203ENST00000535302 TRRAPQ9Y4A5 3859 aa5.79□□□□□ -1.48
SPG11-203ENST00000535302 OTOGQ6ZRI0 2925 aa5.76□□□□□ -1.49
SPG11-203ENST00000535302 HUWE1Q7Z6Z7 4374 aaKnown RBP5.73□□□□□ -1.49
SPG11-203ENST00000535302 VPS13CQ709C8 3753 aa5.73□□□□□ -1.49
SPG11-203ENST00000535302 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
SPG11-203ENST00000535302 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
SPG11-203ENST00000535302 BSNQ9UPA5 3926 aa5.68□□□□□ -1.5
SPG11-203ENST00000535302 FBN3Q75N90 2809 aa5.68□□□□□ -1.5
SPG11-203ENST00000535302 MEGF8Q7Z7M0 2845 aa5.67□□□□□ -1.5
SPG11-203ENST00000535302 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
SPG11-203ENST00000535302 COL7A1Q02388 2944 aa5.66□□□□□ -1.5
SPG11-203ENST00000535302 KRTAP3-3Q9BYR6 98 aa5.61□□□□□ -1.51
SPG11-203ENST00000535302 KRTAP3-2Q9BYR7 98 aa5.58□□□□□ -1.52
SPG11-203ENST00000535302 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
SPG11-203ENST00000535302 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
SPG11-203ENST00000535302 INE1O15225 51 aa5.51□□□□□ -1.53
SPG11-203ENST00000535302 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
SPG11-203ENST00000535302 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms