RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 LINC00575Q6W349 94 aa3.69□□□□□ -1.82
CLIP1-206ENST00000535290 SMIM11BQ8TCY0 68 aa3.69□□□□□ -1.82
CLIP1-206ENST00000535290 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
CLIP1-206ENST00000535290 FAM240AA0A1B0GVK7 77 aa3.67□□□□□ -1.82
CLIP1-206ENST00000535290 C4orf26Q17RF5 130 aa3.67□□□□□ -1.82
CLIP1-206ENST00000535290 TEN1Q86WV5 123 aa3.67□□□□□ -1.82
CLIP1-206ENST00000535290 hADV29S1A0JD25 119 aa3.66□□□□□ -1.82
CLIP1-206ENST00000535290 TMEM218A2RU14 115 aa3.66□□□□□ -1.82
CLIP1-206ENST00000535290 LEPROTL1O95214 131 aa3.66□□□□□ -1.82
CLIP1-206ENST00000535290 ZCCHC13Q8WW36 166 aaKnown RBP3.66□□□□□ -1.82
CLIP1-206ENST00000535290 SNHG12Q9BXW3 62 aa3.66□□□□□ -1.82
CLIP1-206ENST00000535290 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
CLIP1-206ENST00000535290 TTTY13Q9BZ97 58 aa3.66□□□□□ -1.82
CLIP1-206ENST00000535290 IGKV4-1P06312 121 aa3.65□□□□□ -1.83
CLIP1-206ENST00000535290 PRO0628Q9UI54 55 aa3.65□□□□□ -1.83
CLIP1-206ENST00000535290 HSPB8Q9UJY1 196 aa3.65□□□□□ -1.83
CLIP1-206ENST00000535290 H1FX-AS1Q4G0G2 97 aa3.64□□□□□ -1.83
CLIP1-206ENST00000535290 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
CLIP1-206ENST00000535290 IGHV6-1A0A0B4J1U7 121 aa3.63□□□□□ -1.83
CLIP1-206ENST00000535290 FABP4P15090 132 aa3.63□□□□□ -1.83
CLIP1-206ENST00000535290 DEFB116Q30KQ4 102 aa3.62□□□□□ -1.83
CLIP1-206ENST00000535290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.62□□□□□ -1.83
CLIP1-206ENST00000535290 KRTAP8-1Q8IUC2 63 aa3.62□□□□□ -1.83
CLIP1-206ENST00000535290 IMUPQ9GZP8 106 aa3.62□□□□□ -1.83
CLIP1-206ENST00000535290 FAM236AA0A1B0GUQ0 79 aa3.61□□□□□ -1.83
CLIP1-206ENST00000535290 FAM236BA0A1B0GV22 79 aa3.61□□□□□ -1.83
CLIP1-206ENST00000535290 MUSTN1Q8IVN3 82 aa3.61□□□□□ -1.83
CLIP1-206ENST00000535290 PPDPFLQ8WWR9 84 aa3.61□□□□□ -1.83
CLIP1-206ENST00000535290 IFITM1P13164 125 aa3.59□□□□□ -1.83
CLIP1-206ENST00000535290 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.84
CLIP1-206ENST00000535290 A0A1B0GV90 55 aa3.58□□□□□ -1.84
CLIP1-206ENST00000535290 COPS9Q8WXC6 57 aa3.58□□□□□ -1.84
CLIP1-206ENST00000535290 SCGB1D4Q6XE38 83 aa3.57□□□□□ -1.84
CLIP1-206ENST00000535290 C12orf57Q99622 126 aa3.57□□□□□ -1.84
CLIP1-206ENST00000535290 LINC00472Q9H8W2 130 aa3.57□□□□□ -1.84
CLIP1-206ENST00000535290 C3orf79P0CE67 100 aa3.56□□□□□ -1.84
CLIP1-206ENST00000535290 VPS25Q9BRG1 176 aa3.56□□□□□ -1.84
CLIP1-206ENST00000535290 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
CLIP1-206ENST00000535290 CLLU1Q5K131 121 aa3.55□□□□□ -1.84
CLIP1-206ENST00000535290 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
CLIP1-206ENST00000535290 H3BMG7 143 aa3.54□□□□□ -1.84
CLIP1-206ENST00000535290 A0A1B0GVX0 72 aa3.53□□□□□ -1.84
CLIP1-206ENST00000535290 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
CLIP1-206ENST00000535290 SYS1-DBNDD2H3BUS1 97 aa3.53□□□□□ -1.84
CLIP1-206ENST00000535290 BATFQ16520 125 aa3.53□□□□□ -1.84
CLIP1-206ENST00000535290 RAB37Q96AX2 223 aa3.53□□□□□ -1.84
CLIP1-206ENST00000535290 YPEL4Q96NS1 127 aa3.53□□□□□ -1.84
CLIP1-206ENST00000535290 DLEU1O43261 78 aa3.52□□□□□ -1.85
CLIP1-206ENST00000535290 PSMB2P49721 201 aa3.52□□□□□ -1.85
CLIP1-206ENST00000535290 NDUFS5O43920 106 aa3.51□□□□□ -1.85
CLIP1-206ENST00000535290 SMIM6P0DI80 62 aa3.51□□□□□ -1.85
CLIP1-206ENST00000535290 LYRM7Q5U5X0 104 aa3.51□□□□□ -1.85
CLIP1-206ENST00000535290 TRGC2P03986 189 aa3.5□□□□□ -1.85
CLIP1-206ENST00000535290 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
CLIP1-206ENST00000535290 LINC01545Q5VT33 79 aa3.5□□□□□ -1.85
CLIP1-206ENST00000535290 IGKV3D-7A0A0C4DH55 119 aa3.49□□□□□ -1.85
CLIP1-206ENST00000535290 TRBV7-4A0A0J9YYF1 115 aa3.49□□□□□ -1.85
CLIP1-206ENST00000535290 BVES-AS1Q5T3Y7 98 aa3.49□□□□□ -1.85
CLIP1-206ENST00000535290 KLKP1Q107X0 134 aa3.48□□□□□ -1.85
CLIP1-206ENST00000535290 FABP2P12104 132 aa3.47□□□□□ -1.85
CLIP1-206ENST00000535290 CXCL6P80162 114 aa3.47□□□□□ -1.85
CLIP1-206ENST00000535290 MT1XP80297 61 aa3.47□□□□□ -1.85
CLIP1-206ENST00000535290 DSCR8Q96T75 97 aa3.47□□□□□ -1.85
CLIP1-206ENST00000535290 SMIM26A0A096LP01 95 aa3.46□□□□□ -1.86
CLIP1-206ENST00000535290 ANKRD29Q8N6D5 301 aa3.46□□□□□ -1.86
CLIP1-206ENST00000535290 J3KT08 172 aa3.45□□□□□ -1.86
CLIP1-206ENST00000535290 APOC3P02656 99 aa3.45□□□□□ -1.86
CLIP1-206ENST00000535290 K7ERU9 68 aa3.44□□□□□ -1.86
CLIP1-206ENST00000535290 PSPHP1O15172 72 aa3.44□□□□□ -1.86
CLIP1-206ENST00000535290 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
CLIP1-206ENST00000535290 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
CLIP1-206ENST00000535290 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
CLIP1-206ENST00000535290 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
CLIP1-206ENST00000535290 TRACP01848 142 aa3.42□□□□□ -1.86
CLIP1-206ENST00000535290 CCKP06307 115 aa3.42□□□□□ -1.86
CLIP1-206ENST00000535290 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
CLIP1-206ENST00000535290 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
CLIP1-206ENST00000535290 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
CLIP1-206ENST00000535290 A0A1B0GX51 115 aa3.41□□□□□ -1.86
CLIP1-206ENST00000535290 SNCGO76070 127 aa3.41□□□□□ -1.86
CLIP1-206ENST00000535290 C14orf144Q96I85 54 aa3.41□□□□□ -1.86
CLIP1-206ENST00000535290 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
CLIP1-206ENST00000535290 C8orf17Q9NRJ1 99 aa3.41□□□□□ -1.86
CLIP1-206ENST00000535290 MP68P56378 58 aa3.4□□□□□ -1.87
CLIP1-206ENST00000535290 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
CLIP1-206ENST00000535290 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
CLIP1-206ENST00000535290 ATOH7Q8N100 152 aa3.4□□□□□ -1.87
CLIP1-206ENST00000535290 SVBPQ8N300 66 aa3.4□□□□□ -1.87
CLIP1-206ENST00000535290 RBM3P98179 157 aaKnown RBP3.39□□□□□ -1.87
CLIP1-206ENST00000535290 LCA10Q71F78 164 aa3.39□□□□□ -1.87
CLIP1-206ENST00000535290 PRR15Q8IV56 129 aa3.39□□□□□ -1.87
CLIP1-206ENST00000535290 H0YGX0 51 aa3.38□□□□□ -1.87
CLIP1-206ENST00000535290 SCGB1C2P0DMR2 95 aa3.38□□□□□ -1.87
CLIP1-206ENST00000535290 S4R3F8 94 aa3.38□□□□□ -1.87
CLIP1-206ENST00000535290 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
CLIP1-206ENST00000535290 NDUFB1O75438 58 aa3.37□□□□□ -1.87
CLIP1-206ENST00000535290 KRTDAPP60985 99 aa3.37□□□□□ -1.87
CLIP1-206ENST00000535290 C2orf91Q6ZV80 131 aa3.37□□□□□ -1.87
CLIP1-206ENST00000535290 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
CLIP1-206ENST00000535290 C7orf65Q6ZTY9 151 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms